RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 ZNF827Q17R98 1081 aa13.11□□□□□ -0.31
USP17L28-201ENST00000504543 UBR3Q6ZT12 1888 aa13.11□□□□□ -0.31
USP17L28-201ENST00000504543 CHL1O00533 1208 aa13.11□□□□□ -0.31
USP17L28-201ENST00000504543 PTCD1O75127 700 aaKnown RBP13.11□□□□□ -0.31
USP17L28-201ENST00000504543 SSFA2P28290 1259 aa13.11□□□□□ -0.31
USP17L28-201ENST00000504543 R3HDM1Q15032 1099 aaKnown RBP13.11□□□□□ -0.31
USP17L28-201ENST00000504543 LINC00116Q8NCU8 138 aa13.11□□□□□ -0.31
USP17L28-201ENST00000504543 ZNF496Q96IT1 587 aaPredicted RBP13.11□□□□□ -0.31
USP17L28-201ENST00000504543 CFAP44Q96MT7 982 aa13.11□□□□□ -0.31
USP17L28-201ENST00000504543 RPS6KA4O75676 772 aa13.1□□□□□ -0.31
USP17L28-201ENST00000504543 STARD3NLO95772 234 aa13.1□□□□□ -0.31
USP17L28-201ENST00000504543 ZNF853P0CG23 659 aa13.1□□□□□ -0.31
USP17L28-201ENST00000504543 B4GALNT3Q6L9W6 998 aa13.1□□□□□ -0.31
USP17L28-201ENST00000504543 POTEDQ86YR6 584 aa13.1□□□□□ -0.31
USP17L28-201ENST00000504543 EXOC6Q8TAG9 804 aa13.1□□□□□ -0.31
USP17L28-201ENST00000504543 CCDC136Q96JN2 1154 aa13.1□□□□□ -0.31
USP17L28-201ENST00000504543 COL24A1Q17RW2 1714 aa13.1□□□□□ -0.31
USP17L28-201ENST00000504543 TUBGCP6Q96RT7 1819 aa13.09□□□□□ -0.31
USP17L28-201ENST00000504543 MYH14Q7Z406 1995 aaKnown RBP13.09□□□□□ -0.31
USP17L28-201ENST00000504543 SNRPA1P09661 255 aaKnown RBP13.09□□□□□ -0.31
USP17L28-201ENST00000504543 CYP19A1P11511 503 aaPredicted RBP13.09□□□□□ -0.31
USP17L28-201ENST00000504543 AK7Q96M32 723 aa13.09□□□□□ -0.31
USP17L28-201ENST00000504543 IFT57Q9NWB7 429 aa13.09□□□□□ -0.31
USP17L28-201ENST00000504543 TFCP2L1Q9NZI6 479 aa13.09□□□□□ -0.31
USP17L28-201ENST00000504543 PLIN1O60240 522 aa13.08□□□□□ -0.32
USP17L28-201ENST00000504543 RARSP54136 660 aaKnown RBP13.08□□□□□ -0.32
USP17L28-201ENST00000504543 KCNQ4P56696 695 aa13.08□□□□□ -0.32
USP17L28-201ENST00000504543 EIF4A1P60842 406 aaKnown RBP13.08□□□□□ -0.32
USP17L28-201ENST00000504543 GNAI1P63096 354 aa13.08□□□□□ -0.32
USP17L28-201ENST00000504543 PDE3AQ14432 1141 aa13.08□□□□□ -0.32
USP17L28-201ENST00000504543 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.32
USP17L28-201ENST00000504543 PNPLA7Q6ZV29 1317 aa13.08□□□□□ -0.32
USP17L28-201ENST00000504543 LRP5O75197 1615 aa13.08□□□□□ -0.32
USP17L28-201ENST00000504543 HOXB7P09629 217 aa13.07□□□□□ -0.32
USP17L28-201ENST00000504543 CRKLP46109 303 aaKnown RBP13.07□□□□□ -0.32
USP17L28-201ENST00000504543 DNAJC10Q8IXB1 793 aa13.07□□□□□ -0.32
USP17L28-201ENST00000504543 ZNF428Q96B54 188 aa13.07□□□□□ -0.32
USP17L28-201ENST00000504543 CRBNQ96SW2 442 aa13.07□□□□□ -0.32
USP17L28-201ENST00000504543 CCDC87Q9NVE4 849 aa13.07□□□□□ -0.32
USP17L28-201ENST00000504543 RTCBQ9Y3I0 505 aaKnown RBP13.07□□□□□ -0.32
USP17L28-201ENST00000504543 SOS1Q07889 1333 aaPredicted RBP13.07□□□□□ -0.32
USP17L28-201ENST00000504543 KCNQ3O43525 872 aa13.07□□□□□ -0.32
USP17L28-201ENST00000504543 GIGYF1O75420 1035 aaPredicted RBP13.07□□□□□ -0.32
USP17L28-201ENST00000504543 INTS5Q6P9B9 1019 aaKnown RBP13.07□□□□□ -0.32
USP17L28-201ENST00000504543 TSPYL4Q9UJ04 414 aa13.07□□□□□ -0.32
USP17L28-201ENST00000504543 CACNA1FO60840 1977 aa13.07□□□□□ -0.32
USP17L28-201ENST00000504543 ERBB4Q15303 1308 aa13.06□□□□□ -0.32
USP17L28-201ENST00000504543 LAMB4A4D0S4 1761 aa13.06□□□□□ -0.32
USP17L28-201ENST00000504543 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
USP17L28-201ENST00000504543 RGL2O15211 777 aa13.06□□□□□ -0.32
USP17L28-201ENST00000504543 BCAR3O75815 825 aa13.06□□□□□ -0.32
USP17L28-201ENST00000504543 CHMP4AQ9BY43 222 aa13.06□□□□□ -0.32
USP17L28-201ENST00000504543 MTFR1LQ9H019 292 aa13.06□□□□□ -0.32
USP17L28-201ENST00000504543 GNPATO15228 680 aa13.05□□□□□ -0.32
USP17L28-201ENST00000504543 C20orf194Q5TEA3 1177 aa13.05□□□□□ -0.32
USP17L28-201ENST00000504543 TSR2Q969E8 191 aaKnown RBP13.05□□□□□ -0.32
USP17L28-201ENST00000504543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.04□□□□□ -0.32
USP17L28-201ENST00000504543 IL6STP40189 918 aaPredicted RBP13.04□□□□□ -0.32
USP17L28-201ENST00000504543 AAMPQ13685 434 aa13.04□□□□□ -0.32
USP17L28-201ENST00000504543 TRAPPC3LQ5T215 181 aa13.04□□□□□ -0.32
USP17L28-201ENST00000504543 COL23A1Q86Y22 540 aaPredicted RBP13.04□□□□□ -0.32
USP17L28-201ENST00000504543 A0A087WZG4 1122 aa13.03□□□□□ -0.32
USP17L28-201ENST00000504543 EIF5P55010 431 aaKnown RBP13.03□□□□□ -0.32
USP17L28-201ENST00000504543 EXOSC9Q06265 439 aaKnown RBP13.03□□□□□ -0.32
USP17L28-201ENST00000504543 SPON1Q9HCB6 807 aa13.03□□□□□ -0.32
USP17L28-201ENST00000504543 MIS18AQ9NYP9 233 aa13.03□□□□□ -0.32
USP17L28-201ENST00000504543 ALDH1L2Q3SY69 923 aa13.03□□□□□ -0.32
USP17L28-201ENST00000504543 USP16Q9Y5T5 823 aa13.03□□□□□ -0.32
USP17L28-201ENST00000504543 MS4A1P11836 297 aa13.02□□□□□ -0.33
USP17L28-201ENST00000504543 CANXP27824 592 aaKnown RBP13.02□□□□□ -0.33
USP17L28-201ENST00000504543 BRPF1P55201 1214 aaPredicted RBP13.02□□□□□ -0.33
USP17L28-201ENST00000504543 SGIP1Q9BQI5 828 aa13.02□□□□□ -0.33
USP17L28-201ENST00000504543 TSHZ2Q9NRE2 1034 aa13.02□□□□□ -0.33
USP17L28-201ENST00000504543 MBIPQ9NS73 344 aa13.02□□□□□ -0.33
USP17L28-201ENST00000504543 ZBTB1Q9Y2K1 713 aa13.02□□□□□ -0.33
USP17L28-201ENST00000504543 KIF16BQ96L93 1317 aa13.02□□□□□ -0.33
USP17L28-201ENST00000504543 N4BP2Q86UW6 1770 aaPredicted RBP13.01□□□□□ -0.33
USP17L28-201ENST00000504543 NLGN1Q8N2Q7 840 aa13.01□□□□□ -0.33
USP17L28-201ENST00000504543 ARHGEF1Q92888 912 aaKnown RBP13.01□□□□□ -0.33
USP17L28-201ENST00000504543 C4AP0C0L4 1744 aa13.01□□□□□ -0.33
USP17L28-201ENST00000504543 COL15A1P39059 1388 aa13□□□□□ -0.33
USP17L28-201ENST00000504543 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
USP17L28-201ENST00000504543 NARFQ9UHQ1 456 aa13□□□□□ -0.33
USP17L28-201ENST00000504543 USP42Q9H9J4 1324 aaKnown RBP12.99□□□□□ -0.33
USP17L28-201ENST00000504543 RFC4P35249 363 aa12.99□□□□□ -0.33
USP17L28-201ENST00000504543 PTGER2P43116 358 aa12.99□□□□□ -0.33
USP17L28-201ENST00000504543 PDGFDQ9GZP0 370 aaPredicted RBP12.99□□□□□ -0.33
USP17L28-201ENST00000504543 KDM2BQ8NHM5 1336 aa12.99□□□□□ -0.33
USP17L28-201ENST00000504543 ZKSCAN2Q63HK3 967 aa12.98□□□□□ -0.33
USP17L28-201ENST00000504543 SMC4Q9NTJ3 1288 aa12.98□□□□□ -0.33
USP17L28-201ENST00000504543 PRAMEF22A3QJZ6 481 aa12.98□□□□□ -0.33
USP17L28-201ENST00000504543 A1BGP04217 495 aa12.98□□□□□ -0.33
USP17L28-201ENST00000504543 POLD1P28340 1107 aa12.98□□□□□ -0.33
USP17L28-201ENST00000504543 NPM2Q86SE8 214 aaKnown RBP12.98□□□□□ -0.33
USP17L28-201ENST00000504543 SSH1Q8WYL5 1049 aa12.98□□□□□ -0.33
USP17L28-201ENST00000504543 LAS1LQ9Y4W2 734 aaKnown RBP12.98□□□□□ -0.33
USP17L28-201ENST00000504543 NBPF26B4DH59 902 aa12.97□□□□□ -0.33
USP17L28-201ENST00000504543 ZBTB7AO95365 584 aa12.97□□□□□ -0.33
USP17L28-201ENST00000504543 GYS1P13807 737 aa12.97□□□□□ -0.33
USP17L28-201ENST00000504543 NBPF10Q6P3W6 841 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms