RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 LILRB3O75022 631 aa11.46□□□□□ -0.57
CASC9-201ENST00000504531 DESI1Q6ICB0 168 aa11.46□□□□□ -0.57
CASC9-201ENST00000504531 EXOC6Q8TAG9 804 aa11.46□□□□□ -0.57
CASC9-201ENST00000504531 PRR7Q8TB68 274 aa11.46□□□□□ -0.57
CASC9-201ENST00000504531 V9GY48 417 aaPredicted RBP11.46□□□□□ -0.57
CASC9-201ENST00000504531 SIGLEC1Q9BZZ2 1709 aa11.46□□□□□ -0.58
CASC9-201ENST00000504531 QRICH2Q9H0J4 1663 aa11.46□□□□□ -0.58
CASC9-201ENST00000504531 NEXMIFQ5QGS0 1516 aa11.45□□□□□ -0.58
CASC9-201ENST00000504531 PLEKHH1Q9ULM0 1364 aa11.45□□□□□ -0.58
CASC9-201ENST00000504531 CCDC27Q2M243 656 aa11.45□□□□□ -0.58
CASC9-201ENST00000504531 GGT6Q6P531 493 aa11.45□□□□□ -0.58
CASC9-201ENST00000504531 PCMTD1Q96MG8 357 aaPredicted RBP11.45□□□□□ -0.58
CASC9-201ENST00000504531 CARD14Q9BXL6 1004 aa11.45□□□□□ -0.58
CASC9-201ENST00000504531 FCF1Q9Y324 198 aaKnown RBP11.45□□□□□ -0.58
CASC9-201ENST00000504531 PREX1Q8TCU6 1659 aa11.45□□□□□ -0.58
CASC9-201ENST00000504531 NKTRP30414 1462 aaKnown RBP11.44□□□□□ -0.58
CASC9-201ENST00000504531 CGNL1Q0VF96 1302 aa11.44□□□□□ -0.58
CASC9-201ENST00000504531 EVC2Q86UK5 1308 aa11.44□□□□□ -0.58
CASC9-201ENST00000504531 ANP32AP39687 249 aaKnown RBP11.44□□□□□ -0.58
CASC9-201ENST00000504531 CNGB1Q14028 1251 aaPredicted RBP11.44□□□□□ -0.58
CASC9-201ENST00000504531 CABLES1Q8TDN4 633 aa11.44□□□□□ -0.58
CASC9-201ENST00000504531 AGLP35573 1532 aa11.44□□□□□ -0.58
CASC9-201ENST00000504531 MED14O60244 1454 aa11.44□□□□□ -0.58
CASC9-201ENST00000504531 ZMYM3Q14202 1370 aa11.43□□□□□ -0.58
CASC9-201ENST00000504531 ANKRD36BQ8N2N9 1353 aa11.43□□□□□ -0.58
CASC9-201ENST00000504531 QPCTQ16769 361 aa11.43□□□□□ -0.58
CASC9-201ENST00000504531 ERICH6Q7L0X2 663 aa11.43□□□□□ -0.58
CASC9-201ENST00000504531 CENPQQ7L2Z9 268 aaPredicted RBP11.43□□□□□ -0.58
CASC9-201ENST00000504531 IPO9Q96P70 1041 aaKnown RBP11.43□□□□□ -0.58
CASC9-201ENST00000504531 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.43□□□□□ -0.58
CASC9-201ENST00000504531 PRKD2Q9BZL6 878 aa11.43□□□□□ -0.58
CASC9-201ENST00000504531 STRCQ7RTU9 1775 aa11.42□□□□□ -0.58
CASC9-201ENST00000504531 TOM1O60784 492 aa11.42□□□□□ -0.58
CASC9-201ENST00000504531 PDE3AQ14432 1141 aa11.42□□□□□ -0.58
CASC9-201ENST00000504531 WDR63Q8IWG1 891 aa11.42□□□□□ -0.58
CASC9-201ENST00000504531 KDM2BQ8NHM5 1336 aa11.41□□□□□ -0.58
CASC9-201ENST00000504531 ARHGEF28Q8N1W1 1705 aaKnown RBP11.41□□□□□ -0.58
CASC9-201ENST00000504531 CT47B1P0C2W7 299 aaPredicted RBP11.41□□□□□ -0.58
CASC9-201ENST00000504531 HSPA1LP34931 641 aa11.41□□□□□ -0.58
CASC9-201ENST00000504531 BACH2Q9BYV9 841 aa11.41□□□□□ -0.58
CASC9-201ENST00000504531 SLC19A1P41440 591 aa11.4□□□□□ -0.58
CASC9-201ENST00000504531 PTPRNQ16849 979 aa11.4□□□□□ -0.58
CASC9-201ENST00000504531 PROCA1Q8NCQ7 364 aaPredicted RBP11.4□□□□□ -0.58
CASC9-201ENST00000504531 HELBQ8NG08 1087 aaPredicted RBP11.4□□□□□ -0.58
CASC9-201ENST00000504531 RUNDC1Q96C34 613 aa11.4□□□□□ -0.58
CASC9-201ENST00000504531 CFAP53Q96M91 514 aa11.4□□□□□ -0.58
CASC9-201ENST00000504531 NUDT12Q9BQG2 462 aa11.4□□□□□ -0.58
CASC9-201ENST00000504531 NOP58Q9Y2X3 529 aaKnown RBP11.4□□□□□ -0.58
CASC9-201ENST00000504531 ATAD2Q6PL18 1390 aa11.4□□□□□ -0.59
CASC9-201ENST00000504531 CLTCQ00610 1675 aaKnown RBP11.4□□□□□ -0.59
CASC9-201ENST00000504531 TMEM131LA2VDJ0 1609 aa11.39□□□□□ -0.59
CASC9-201ENST00000504531 CFAP99D6REC4 459 aa11.39□□□□□ -0.59
CASC9-201ENST00000504531 ZBTB24O43167 697 aaPredicted RBP11.39□□□□□ -0.59
CASC9-201ENST00000504531 RPIAP49247 311 aa11.39□□□□□ -0.59
CASC9-201ENST00000504531 PPP2R2DQ66LE6 453 aa11.39□□□□□ -0.59
CASC9-201ENST00000504531 MORC1Q86VD1 984 aa11.39□□□□□ -0.59
CASC9-201ENST00000504531 NSD3Q9BZ95 1437 aa11.39□□□□□ -0.59
CASC9-201ENST00000504531 LTBP4Q8N2S1 1624 aa11.38□□□□□ -0.59
CASC9-201ENST00000504531 SETD1BQ9UPS6 1966 aaKnown RBP11.38□□□□□ -0.59
CASC9-201ENST00000504531 CCDC24Q8N4L8 307 aa11.38□□□□□ -0.59
CASC9-201ENST00000504531 CRBNQ96SW2 442 aa11.38□□□□□ -0.59
CASC9-201ENST00000504531 SHPRHQ149N8 1683 aa11.38□□□□□ -0.59
CASC9-201ENST00000504531 DLC1Q96QB1 1528 aa11.38□□□□□ -0.59
CASC9-201ENST00000504531 IQSEC2Q5JU85 1478 aa11.38□□□□□ -0.59
CASC9-201ENST00000504531 TULP4Q9NRJ4 1543 aa11.37□□□□□ -0.59
CASC9-201ENST00000504531 APAF1O14727 1248 aa11.37□□□□□ -0.59
CASC9-201ENST00000504531 CCNYL3P0C7X3 344 aa11.37□□□□□ -0.59
CASC9-201ENST00000504531 RTL5Q5HYW3 569 aaPredicted RBP11.37□□□□□ -0.59
CASC9-201ENST00000504531 PLA2G2CQ5R387 149 aa11.37□□□□□ -0.59
CASC9-201ENST00000504531 ABCC11Q96J66 1382 aa11.37□□□□□ -0.59
CASC9-201ENST00000504531 IDI1Q13907 227 aa11.36□□□□□ -0.59
CASC9-201ENST00000504531 LYPD8Q6UX82 237 aa11.36□□□□□ -0.59
CASC9-201ENST00000504531 WWC1Q8IX03 1113 aa11.36□□□□□ -0.59
CASC9-201ENST00000504531 TSC1Q92574 1164 aa11.36□□□□□ -0.59
CASC9-201ENST00000504531 PNNQ9H307 717 aaKnown RBP11.36□□□□□ -0.59
CASC9-201ENST00000504531 TRAK1Q9UPV9 953 aa11.36□□□□□ -0.59
CASC9-201ENST00000504531 CD2BP2O95400 341 aaKnown RBP11.35□□□□□ -0.59
CASC9-201ENST00000504531 SPRYD7Q5W111 196 aa11.35□□□□□ -0.59
CASC9-201ENST00000504531 LIAT1Q6ZQX7 453 aa11.35□□□□□ -0.59
CASC9-201ENST00000504531 SIRT1Q96EB6 747 aa11.35□□□□□ -0.59
CASC9-201ENST00000504531 ANKRD26Q9UPS8 1709 aa11.35□□□□□ -0.59
CASC9-201ENST00000504531 SLC12A5Q9H2X9 1139 aa11.34□□□□□ -0.59
CASC9-201ENST00000504531 TERF2IPQ9NYB0 399 aa11.34□□□□□ -0.59
CASC9-201ENST00000504531 IL16Q14005 1332 aa11.34□□□□□ -0.59
CASC9-201ENST00000504531 C3P01024 1663 aa11.33□□□□□ -0.6
CASC9-201ENST00000504531 ADGRB2O60241 1585 aa11.33□□□□□ -0.6
CASC9-201ENST00000504531 ZNF598Q86UK7 904 aaKnown RBP11.33□□□□□ -0.6
CASC9-201ENST00000504531 ANKLE2Q86XL3 938 aa11.33□□□□□ -0.6
CASC9-201ENST00000504531 EMID1Q96A84 441 aaPredicted RBP11.33□□□□□ -0.6
CASC9-201ENST00000504531 EVA1BQ9NVM1 165 aa11.33□□□□□ -0.6
CASC9-201ENST00000504531 MYH16Q9H6N6 1097 aa11.32□□□□□ -0.6
CASC9-201ENST00000504531 USP35Q9P2H5 1018 aa11.32□□□□□ -0.6
CASC9-201ENST00000504531 CFAP65Q6ZU64 1925 aaKnown RBP11.32□□□□□ -0.6
CASC9-201ENST00000504531 YTHDC2Q9H6S0 1430 aaKnown RBP11.32□□□□□ -0.6
CASC9-201ENST00000504531 PNPLA6Q8IY17 1366 aa11.31□□□□□ -0.6
CASC9-201ENST00000504531 PLIN1O60240 522 aa11.31□□□□□ -0.6
CASC9-201ENST00000504531 KCNH2Q12809 1159 aa11.31□□□□□ -0.6
CASC9-201ENST00000504531 FBXO31Q5XUX0 539 aaPredicted RBP11.31□□□□□ -0.6
CASC9-201ENST00000504531 RFC5P40937 340 aa11.3□□□□□ -0.6
CASC9-201ENST00000504531 MTHFSP49914 203 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms