RNA–Protein interactions for RNA: ENST00000503784.1

RFC1-206, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-206ENST00000503784 ASAP1Q9ULH1 1129 aa9.79□□□□□ -0.84
RFC1-206ENST00000503784 RTCBQ9Y3I0 505 aaKnown RBP9.79□□□□□ -0.84
RFC1-206ENST00000503784 KIF13BQ9NQT8 1826 aa9.79□□□□□ -0.84
RFC1-206ENST00000503784 RGPD2P0DJD1 1756 aa9.78□□□□□ -0.84
RFC1-206ENST00000503784 GYS1P13807 737 aa9.78□□□□□ -0.84
RFC1-206ENST00000503784 CTCFP49711 727 aaPredicted RBP9.78□□□□□ -0.84
RFC1-206ENST00000503784 TRAPPC3LQ5T215 181 aa9.78□□□□□ -0.84
RFC1-206ENST00000503784 KIF12Q96FN5 646 aa9.78□□□□□ -0.84
RFC1-206ENST00000503784 ABHD8Q96I13 439 aa9.78□□□□□ -0.84
RFC1-206ENST00000503784 BMP2KQ9NSY1 1161 aaPredicted RBP9.78□□□□□ -0.84
RFC1-206ENST00000503784 TMOD3Q9NYL9 352 aa9.78□□□□□ -0.84
RFC1-206ENST00000503784 RTL1A6NKG5 1358 aa9.77□□□□□ -0.84
RFC1-206ENST00000503784 C4AP0C0L4 1744 aa9.77□□□□□ -0.85
RFC1-206ENST00000503784 GLTPD2A6NH11 291 aa9.77□□□□□ -0.85
RFC1-206ENST00000503784 RFC4P35249 363 aa9.77□□□□□ -0.85
RFC1-206ENST00000503784 LBX1P52954 281 aa9.77□□□□□ -0.85
RFC1-206ENST00000503784 ARHGEF1Q92888 912 aaKnown RBP9.77□□□□□ -0.85
RFC1-206ENST00000503784 TRPC6Q9Y210 931 aa9.77□□□□□ -0.85
RFC1-206ENST00000503784 MLLT1Q03111 559 aaPredicted RBP9.76□□□□□ -0.85
RFC1-206ENST00000503784 L3MBTL2Q969R5 705 aa9.76□□□□□ -0.85
RFC1-206ENST00000503784 CNTNAP1P78357 1384 aa9.75□□□□□ -0.85
RFC1-206ENST00000503784 CCDC85CA6NKD9 419 aa9.75□□□□□ -0.85
RFC1-206ENST00000503784 LMNB1P20700 586 aa9.75□□□□□ -0.85
RFC1-206ENST00000503784 SRP68Q9UHB9 627 aaKnown RBP9.75□□□□□ -0.85
RFC1-206ENST00000503784 ZC3H4Q9UPT8 1303 aaKnown RBP9.75□□□□□ -0.85
RFC1-206ENST00000503784 DDR1Q08345 913 aa9.74□□□□□ -0.85
RFC1-206ENST00000503784 HSP90AB2PQ58FF8 381 aa9.74□□□□□ -0.85
RFC1-206ENST00000503784 ATG3Q9NT62 314 aa9.74□□□□□ -0.85
RFC1-206ENST00000503784 BRCA1P38398 1863 aaKnown RBP9.74□□□□□ -0.85
RFC1-206ENST00000503784 KDM6AO15550 1401 aaPredicted RBP9.73□□□□□ -0.85
RFC1-206ENST00000503784 MAP2P11137 1827 aaKnown RBP9.73□□□□□ -0.85
RFC1-206ENST00000503784 POTECB2RU33 542 aa9.73□□□□□ -0.85
RFC1-206ENST00000503784 VEGFBP49765 207 aa9.73□□□□□ -0.85
RFC1-206ENST00000503784 FKBP8Q14318 412 aa9.73□□□□□ -0.85
RFC1-206ENST00000503784 CFAP44Q96MT7 982 aa9.73□□□□□ -0.85
RFC1-206ENST00000503784 COLQQ9Y215 455 aaPredicted RBP9.73□□□□□ -0.85
RFC1-206ENST00000503784 KDRP35968 1356 aa9.73□□□□□ -0.85
RFC1-206ENST00000503784 ARFGEF1Q9Y6D6 1849 aa9.72□□□□□ -0.85
RFC1-206ENST00000503784 HSPA8P11142 646 aaKnown RBP9.72□□□□□ -0.85
RFC1-206ENST00000503784 TIE1P35590 1138 aa9.72□□□□□ -0.85
RFC1-206ENST00000503784 SLC4A9Q96Q91 983 aa9.72□□□□□ -0.85
RFC1-206ENST00000503784 GGNBP2Q9H3C7 697 aa9.72□□□□□ -0.85
RFC1-206ENST00000503784 SPG7Q9UQ90 795 aa9.72□□□□□ -0.85
RFC1-206ENST00000503784 ITGB4P16144 1822 aa9.72□□□□□ -0.85
RFC1-206ENST00000503784 RPS6KA4O75676 772 aa9.71□□□□□ -0.86
RFC1-206ENST00000503784 NKX1-1Q15270 411 aaPredicted RBP9.71□□□□□ -0.86
RFC1-206ENST00000503784 WBP1LQ9NX94 342 aa9.71□□□□□ -0.86
RFC1-206ENST00000503784 CNTNAP4Q9C0A0 1308 aa9.71□□□□□ -0.86
RFC1-206ENST00000503784 INSRP06213 1382 aa9.71□□□□□ -0.86
RFC1-206ENST00000503784 NFKBIEO00221 500 aa9.7□□□□□ -0.86
RFC1-206ENST00000503784 DPY19L2Q6NUT2 758 aa9.7□□□□□ -0.86
RFC1-206ENST00000503784 USP42Q9H9J4 1324 aaKnown RBP9.7□□□□□ -0.86
RFC1-206ENST00000503784 FLT4P35916 1363 aa9.7□□□□□ -0.86
RFC1-206ENST00000503784 TIAM2Q8IVF5 1701 aa9.7□□□□□ -0.86
RFC1-206ENST00000503784 POLRMTO00411 1230 aaKnown RBP9.69□□□□□ -0.86
RFC1-206ENST00000503784 MAP3K13O43283 966 aa9.69□□□□□ -0.86
RFC1-206ENST00000503784 RC3H1Q5TC82 1133 aaKnown RBP9.69□□□□□ -0.86
RFC1-206ENST00000503784 PPM1GO15355 546 aaPredicted RBP9.68□□□□□ -0.86
RFC1-206ENST00000503784 PHKG2P15735 406 aa9.68□□□□□ -0.86
RFC1-206ENST00000503784 CRKLP46109 303 aaKnown RBP9.68□□□□□ -0.86
RFC1-206ENST00000503784 ERFEQ4G0M1 354 aa9.68□□□□□ -0.86
RFC1-206ENST00000503784 CARD11Q9BXL7 1154 aa9.68□□□□□ -0.86
RFC1-206ENST00000503784 TMEM88BA6NKF7 163 aa9.67□□□□□ -0.86
RFC1-206ENST00000503784 PTCD1O75127 700 aaKnown RBP9.67□□□□□ -0.86
RFC1-206ENST00000503784 DDNO94850 711 aaPredicted RBP9.67□□□□□ -0.86
RFC1-206ENST00000503784 IFNL2Q8IZJ0 200 aa9.67□□□□□ -0.86
RFC1-206ENST00000503784 TTLL6Q8N841 843 aa9.67□□□□□ -0.86
RFC1-206ENST00000503784 EMILIN1Q9Y6C2 1016 aa9.67□□□□□ -0.86
RFC1-206ENST00000503784 SBF1O95248 1867 aa9.67□□□□□ -0.86
RFC1-206ENST00000503784 PASKQ96RG2 1323 aa9.66□□□□□ -0.86
RFC1-206ENST00000503784 TTLL13PA6NNM8 815 aa9.66□□□□□ -0.86
RFC1-206ENST00000503784 FYB1O15117 783 aa9.66□□□□□ -0.86
RFC1-206ENST00000503784 SEC24BO95487 1268 aa9.66□□□□□ -0.86
RFC1-206ENST00000503784 RGS19P49795 217 aa9.66□□□□□ -0.86
RFC1-206ENST00000503784 NEUROD1Q13562 356 aa9.66□□□□□ -0.86
RFC1-206ENST00000503784 EAPPQ56P03 285 aaPredicted RBP9.66□□□□□ -0.86
RFC1-206ENST00000503784 USPL1Q5W0Q7 1092 aa9.66□□□□□ -0.86
RFC1-206ENST00000503784 C2CD5Q86YS7 1000 aa9.66□□□□□ -0.86
RFC1-206ENST00000503784 SIN3AQ96ST3 1273 aa9.66□□□□□ -0.86
RFC1-206ENST00000503784 ST18O60284 1047 aa9.65□□□□□ -0.86
RFC1-206ENST00000503784 GRM1Q13255 1194 aa9.65□□□□□ -0.86
RFC1-206ENST00000503784 PAXIP1Q6ZW49 1069 aaPredicted RBP9.65□□□□□ -0.86
RFC1-206ENST00000503784 LDHDQ86WU2 507 aa9.65□□□□□ -0.86
RFC1-206ENST00000503784 TSKSQ9UJT2 592 aa9.65□□□□□ -0.86
RFC1-206ENST00000503784 ABT1Q9ULW3 272 aaKnown RBP9.65□□□□□ -0.86
RFC1-206ENST00000503784 NCAPD2Q15021 1401 aa9.65□□□□□ -0.87
RFC1-206ENST00000503784 CARMIL3Q8ND23 1372 aa9.64□□□□□ -0.87
RFC1-206ENST00000503784 C21orf2O43822 256 aa9.64□□□□□ -0.87
RFC1-206ENST00000503784 ZPR1O75312 459 aa9.64□□□□□ -0.87
RFC1-206ENST00000503784 TM4SF1P30408 202 aa9.64□□□□□ -0.87
RFC1-206ENST00000503784 MAP2K1Q02750 393 aaPredicted RBP9.64□□□□□ -0.87
RFC1-206ENST00000503784 EYA1Q99502 592 aa9.64□□□□□ -0.87
RFC1-206ENST00000503784 WDR33Q9C0J8 1336 aaKnown RBP9.63□□□□□ -0.87
RFC1-206ENST00000503784 COL5A3P25940 1745 aaPredicted RBP9.63□□□□□ -0.87
RFC1-206ENST00000503784 H0YIN7 160 aa9.63□□□□□ -0.87
RFC1-206ENST00000503784 CABP4P57796 275 aa9.63□□□□□ -0.87
RFC1-206ENST00000503784 NFIXQ14938 502 aa9.63□□□□□ -0.87
RFC1-206ENST00000503784 DEFB115Q30KQ5 88 aa9.63□□□□□ -0.87
RFC1-206ENST00000503784 ZNF622Q969S3 477 aaKnown RBP eCLIP9.63□□□□□ -0.873e-8■□□□□ 11.3
RFC1-206ENST00000503784 TAF1DQ9H5J8 278 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms