RNA–Protein interactions for RNA: ENST00000503450.1

SCFD2-203, Transcript of sec1 family domain containing 2, humanhuman

TSL 4

Gene SCFD2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-203ENST00000503450 THUMPD2Q9BTF0 503 aaKnown RBP6.96□□□□□ -1.3
SCFD2-203ENST00000503450 CCDC87Q9NVE4 849 aa6.96□□□□□ -1.3
SCFD2-203ENST00000503450 RTCBQ9Y3I0 505 aaKnown RBP6.96□□□□□ -1.3
SCFD2-203ENST00000503450 PXDNLA1KZ92 1463 aa6.96□□□□□ -1.3
SCFD2-203ENST00000503450 SCN7AQ01118 1682 aa6.96□□□□□ -1.3
SCFD2-203ENST00000503450 FKBP8Q14318 412 aa6.95□□□□□ -1.3
SCFD2-203ENST00000503450 NFE2L2Q16236 605 aa6.95□□□□□ -1.3
SCFD2-203ENST00000503450 CCDC184Q52MB2 194 aa6.95□□□□□ -1.3
SCFD2-203ENST00000503450 COL15A1P39059 1388 aa6.95□□□□□ -1.3
SCFD2-203ENST00000503450 NRXN2Q9P2S2 1712 aa6.94□□□□□ -1.3
SCFD2-203ENST00000503450 NBPF26B4DH59 902 aa6.94□□□□□ -1.3
SCFD2-203ENST00000503450 HTATSF1O43719 755 aaKnown RBP6.94□□□□□ -1.3
SCFD2-203ENST00000503450 EIF5P55010 431 aaKnown RBP6.94□□□□□ -1.3
SCFD2-203ENST00000503450 TEFQ10587 303 aa6.94□□□□□ -1.3
SCFD2-203ENST00000503450 TRAPPC3LQ5T215 181 aa6.94□□□□□ -1.3
SCFD2-203ENST00000503450 USPL1Q5W0Q7 1092 aa6.94□□□□□ -1.3
SCFD2-203ENST00000503450 NBPF10Q6P3W6 841 aaKnown RBP6.94□□□□□ -1.3
SCFD2-203ENST00000503450 NBPF15Q8N660 670 aa6.94□□□□□ -1.3
SCFD2-203ENST00000503450 CD2APQ9Y5K6 639 aa6.94□□□□□ -1.3
SCFD2-203ENST00000503450 CARMIL3Q8ND23 1372 aa6.94□□□□□ -1.3
SCFD2-203ENST00000503450 LAMB4A4D0S4 1761 aa6.93□□□□□ -1.3
SCFD2-203ENST00000503450 BCORQ6W2J9 1755 aa6.93□□□□□ -1.3
SCFD2-203ENST00000503450 BTBD11A6QL63 1104 aa6.93□□□□□ -1.3
SCFD2-203ENST00000503450 POLRMTO00411 1230 aaKnown RBP6.93□□□□□ -1.3
SCFD2-203ENST00000503450 A1BGP04217 495 aa6.93□□□□□ -1.3
SCFD2-203ENST00000503450 TM4SF1P30408 202 aa6.93□□□□□ -1.3
SCFD2-203ENST00000503450 TMPOP42166 694 aaKnown RBP6.93□□□□□ -1.3
SCFD2-203ENST00000503450 PIP4K2AP48426 406 aaPredicted RBP6.93□□□□□ -1.3
SCFD2-203ENST00000503450 KLHL34Q8N239 644 aa6.93□□□□□ -1.3
SCFD2-203ENST00000503450 MIS18AQ9NYP9 233 aa6.93□□□□□ -1.3
SCFD2-203ENST00000503450 USP16Q9Y5T5 823 aa6.93□□□□□ -1.3
SCFD2-203ENST00000503450 BRCA1P38398 1863 aaKnown RBP6.93□□□□□ -1.3
SCFD2-203ENST00000503450 CAMTA2O94983 1202 aa6.92□□□□□ -1.3
SCFD2-203ENST00000503450 KCNA3P22001 575 aa6.92□□□□□ -1.3
SCFD2-203ENST00000503450 HMGB2P26583 209 aaKnown RBP6.92□□□□□ -1.3
SCFD2-203ENST00000503450 CANXP27824 592 aaKnown RBP6.92□□□□□ -1.3
SCFD2-203ENST00000503450 HOXD11P31277 338 aaPredicted RBP6.92□□□□□ -1.3
SCFD2-203ENST00000503450 RFC4P35249 363 aa6.92□□□□□ -1.3
SCFD2-203ENST00000503450 NFIXQ14938 502 aa6.92□□□□□ -1.3
SCFD2-203ENST00000503450 LRP10Q7Z4F1 713 aa6.92□□□□□ -1.3
SCFD2-203ENST00000503450 CCDC146Q8IYE0 955 aa6.92□□□□□ -1.3
SCFD2-203ENST00000503450 TTC5Q8N0Z6 440 aa6.92□□□□□ -1.3
SCFD2-203ENST00000503450 NLGN1Q8N2Q7 840 aa6.92□□□□□ -1.3
SCFD2-203ENST00000503450 FMNL2Q96PY5 1086 aa6.92□□□□□ -1.3
SCFD2-203ENST00000503450 NARFQ9UHQ1 456 aa6.92□□□□□ -1.3
SCFD2-203ENST00000503450 ADAMTS8Q9UP79 889 aa6.92□□□□□ -1.3
SCFD2-203ENST00000503450 TRIM35Q9UPQ4 493 aa6.92□□□□□ -1.3
SCFD2-203ENST00000503450 RRP7AQ9Y3A4 280 aaKnown RBP6.92□□□□□ -1.3
SCFD2-203ENST00000503450 N4BP2Q86UW6 1770 aaPredicted RBP6.91□□□□□ -1.3
SCFD2-203ENST00000503450 IL6STP40189 918 aaPredicted RBP6.91□□□□□ -1.3
SCFD2-203ENST00000503450 EIF4A1P60842 406 aaKnown RBP6.91□□□□□ -1.3
SCFD2-203ENST00000503450 TAF7Q15545 349 aaPredicted RBP6.91□□□□□ -1.3
SCFD2-203ENST00000503450 RTF1Q92541 710 aaKnown RBP6.91□□□□□ -1.3
SCFD2-203ENST00000503450 WWC3Q9ULE0 1092 aa6.91□□□□□ -1.3
SCFD2-203ENST00000503450 AFDNP55196 1824 aaKnown RBP6.91□□□□□ -1.3
SCFD2-203ENST00000503450 ADCY9O60503 1353 aa6.91□□□□□ -1.3
SCFD2-203ENST00000503450 COL11A2P13942 1736 aaPredicted RBP6.9□□□□□ -1.3
SCFD2-203ENST00000503450 ANKRD31Q8N7Z5 1873 aa6.9□□□□□ -1.3
SCFD2-203ENST00000503450 GIGYF1O75420 1035 aaPredicted RBP6.9□□□□□ -1.3
SCFD2-203ENST00000503450 STARD3NLO95772 234 aa6.9□□□□□ -1.3
SCFD2-203ENST00000503450 YY1P25490 414 aa6.9□□□□□ -1.3
SCFD2-203ENST00000503450 KRT24Q2M2I5 525 aa6.9□□□□□ -1.3
SCFD2-203ENST00000503450 TBC1D9BQ66K14 1250 aa6.9□□□□□ -1.3
SCFD2-203ENST00000503450 TBC1D2BQ9UPU7 963 aa6.9□□□□□ -1.3
SCFD2-203ENST00000503450 MAPK8IP3Q9UPT6 1336 aa6.9□□□□□ -1.3
SCFD2-203ENST00000503450 A0A0G2JLW4 131 aa6.89□□□□□ -1.31
SCFD2-203ENST00000503450 SNRPA1P09661 255 aaKnown RBP6.89□□□□□ -1.31
SCFD2-203ENST00000503450 DPEP1P16444 411 aa6.89□□□□□ -1.31
SCFD2-203ENST00000503450 RIPK4P57078 832 aa6.89□□□□□ -1.31
SCFD2-203ENST00000503450 PDIA6Q15084 440 aa6.89□□□□□ -1.31
SCFD2-203ENST00000503450 RUNDC1Q96C34 613 aa6.89□□□□□ -1.31
SCFD2-203ENST00000503450 TEX13AQ9BXU3 409 aaPredicted RBP6.89□□□□□ -1.31
SCFD2-203ENST00000503450 DLEC1Q9Y238 1755 aa6.89□□□□□ -1.31
SCFD2-203ENST00000503450 CHD4Q14839 1912 aa6.88□□□□□ -1.31
SCFD2-203ENST00000503450 CHRNA5P30532 468 aa6.88□□□□□ -1.31
SCFD2-203ENST00000503450 TGFB2P61812 414 aa6.88□□□□□ -1.31
SCFD2-203ENST00000503450 GPR162Q16538 588 aa6.88□□□□□ -1.31
SCFD2-203ENST00000503450 PROSER3Q2NL68 480 aa6.88□□□□□ -1.31
SCFD2-203ENST00000503450 DZIP3Q86Y13 1208 aaKnown RBP6.88□□□□□ -1.31
SCFD2-203ENST00000503450 ZNF784Q8NCA9 323 aaPredicted RBP6.88□□□□□ -1.31
SCFD2-203ENST00000503450 PARP3Q9Y6F1 533 aa6.88□□□□□ -1.31
SCFD2-203ENST00000503450 TNRC6CQ9HCJ0 1690 aaKnown RBP6.87□□□□□ -1.31
SCFD2-203ENST00000503450 A0A087WZG4 1122 aa6.87□□□□□ -1.31
SCFD2-203ENST00000503450 CHL1O00533 1208 aa6.87□□□□□ -1.31
SCFD2-203ENST00000503450 ZPR1O75312 459 aa6.87□□□□□ -1.31
SCFD2-203ENST00000503450 SERPINB2P05120 415 aa6.87□□□□□ -1.31
SCFD2-203ENST00000503450 ZNF853P0CG23 659 aa6.87□□□□□ -1.31
SCFD2-203ENST00000503450 PRELPP51888 382 aa6.87□□□□□ -1.31
SCFD2-203ENST00000503450 WDR43Q15061 677 aaKnown RBP eCLIP6.87□□□□□ -1.31
SCFD2-203ENST00000503450 HLFQ16534 295 aa6.87□□□□□ -1.31
SCFD2-203ENST00000503450 PRR5LQ6MZQ0 368 aa6.87□□□□□ -1.31
SCFD2-203ENST00000503450 TTLL7Q6ZT98 887 aa6.87□□□□□ -1.31
SCFD2-203ENST00000503450 CCDC24Q8N4L8 307 aa6.87□□□□□ -1.31
SCFD2-203ENST00000503450 PNISRQ8TF01 805 aaKnown RBP6.87□□□□□ -1.31
SCFD2-203ENST00000503450 TSPYL4Q9UJ04 414 aa6.87□□□□□ -1.31
SCFD2-203ENST00000503450 ABCC12Q96J65 1359 aa6.86□□□□□ -1.31
SCFD2-203ENST00000503450 UBN2Q6ZU65 1347 aa6.86□□□□□ -1.31
SCFD2-203ENST00000503450 ARFGEF1Q9Y6D6 1849 aa6.86□□□□□ -1.31
SCFD2-203ENST00000503450 APAF1O14727 1248 aa6.86□□□□□ -1.31
SCFD2-203ENST00000503450 ANXA1P04083 346 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms