RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 NR1H3Q13133 447 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 NR6A1Q15406 480 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 GRIPAP1Q4V328 841 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 POTEAQ6S8J7 498 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 CLP1Q92989 425 aaKnown RBP10.13□□□□□ -0.79
PTCD2-206ENST00000503315 SPATA32Q96LK8 384 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 ADAM33Q9BZ11 813 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 PPP1R1BQ9UD71 204 aaPredicted RBP10.13□□□□□ -0.79
PTCD2-206ENST00000503315 PCDHGC3Q9UN70 934 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 RPGRIP1LQ68CZ1 1315 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 SHPRHQ149N8 1683 aa10.12□□□□□ -0.79
PTCD2-206ENST00000503315 ATP2B4P23634 1241 aa10.12□□□□□ -0.79
PTCD2-206ENST00000503315 BRINP3Q76B58 766 aa10.12□□□□□ -0.79
PTCD2-206ENST00000503315 PLEKHM2Q8IWE5 1019 aa10.12□□□□□ -0.79
PTCD2-206ENST00000503315 MST1RQ04912 1400 aa10.11□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L5A8MUK1 530 aa10.11□□□□□ -0.79
PTCD2-206ENST00000503315 CFAP99D6REC4 459 aa10.11□□□□□ -0.79
PTCD2-206ENST00000503315 SMARCA5O60264 1052 aaPredicted RBP10.11□□□□□ -0.79
PTCD2-206ENST00000503315 NPAS4Q8IUM7 802 aa10.11□□□□□ -0.79
PTCD2-206ENST00000503315 NHSL1Q5SYE7 1610 aa10.11□□□□□ -0.79
PTCD2-206ENST00000503315 IFT172Q9UG01 1749 aa10.11□□□□□ -0.79
PTCD2-206ENST00000503315 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
PTCD2-206ENST00000503315 MPHOSPH9Q99550 1183 aa10.1□□□□□ -0.79
PTCD2-206ENST00000503315 CDCA7Q9BWT1 371 aaPredicted RBP10.1□□□□□ -0.79
PTCD2-206ENST00000503315 CHMP4AQ9BY43 222 aa10.1□□□□□ -0.79
PTCD2-206ENST00000503315 FAM198AQ9UFP1 575 aa10.1□□□□□ -0.79
PTCD2-206ENST00000503315 SPATA31A6Q5VVP1 1343 aa10.1□□□□□ -0.79
PTCD2-206ENST00000503315 ADGRL3Q9HAR2 1447 aa10.1□□□□□ -0.79
PTCD2-206ENST00000503315 GUCA2AQ02747 115 aa10.09□□□□□ -0.79
PTCD2-206ENST00000503315 TATDN2Q93075 761 aa10.09□□□□□ -0.79
PTCD2-206ENST00000503315 ASXL1Q8IXJ9 1541 aa10.08□□□□□ -0.8
PTCD2-206ENST00000503315 ATP5J2-PTCD1G3V325 749 aa10.08□□□□□ -0.8
PTCD2-206ENST00000503315 RASA1P20936 1047 aa10.08□□□□□ -0.8
PTCD2-206ENST00000503315 MKRN1Q9UHC7 482 aaKnown RBP10.08□□□□□ -0.8
PTCD2-206ENST00000503315 LRP6O75581 1613 aa10.08□□□□□ -0.8
PTCD2-206ENST00000503315 PRAG1Q86YV5 1406 aa10.08□□□□□ -0.8
PTCD2-206ENST00000503315 PIK3CDO00329 1044 aa10.07□□□□□ -0.8
PTCD2-206ENST00000503315 NOM1Q5C9Z4 860 aaKnown RBP10.07□□□□□ -0.8
PTCD2-206ENST00000503315 ZNF592Q92610 1267 aa10.07□□□□□ -0.8
PTCD2-206ENST00000503315 ROBO2Q9HCK4 1378 aa10.07□□□□□ -0.8
PTCD2-206ENST00000503315 PTCH1Q13635 1447 aa10.07□□□□□ -0.8
PTCD2-206ENST00000503315 SETD5Q9C0A6 1442 aa10.07□□□□□ -0.8
PTCD2-206ENST00000503315 LAMC1P11047 1609 aa10.07□□□□□ -0.8
PTCD2-206ENST00000503315 RGL3Q3MIN7 710 aa10.07□□□□□ -0.8
PTCD2-206ENST00000503315 NAALADL2Q58DX5 795 aa10.07□□□□□ -0.8
PTCD2-206ENST00000503315 TSKSQ9UJT2 592 aa10.07□□□□□ -0.8
PTCD2-206ENST00000503315 ADGRF5Q8IZF2 1346 aa10.06□□□□□ -0.8
PTCD2-206ENST00000503315 CCDC144AA2RUR9 1427 aa10.06□□□□□ -0.8
PTCD2-206ENST00000503315 SPATA31E1Q6ZUB1 1445 aa10.06□□□□□ -0.8
PTCD2-206ENST00000503315 ZBBXA8MT70 800 aa10.06□□□□□ -0.8
PTCD2-206ENST00000503315 SWI5Q1ZZU3 235 aa10.06□□□□□ -0.8
PTCD2-206ENST00000503315 CRTC2Q53ET0 693 aaPredicted RBP10.06□□□□□ -0.8
PTCD2-206ENST00000503315 DDX17Q92841 729 aaKnown RBP10.06□□□□□ -0.8
PTCD2-206ENST00000503315 LRRC59Q96AG4 307 aaKnown RBP10.06□□□□□ -0.8
PTCD2-206ENST00000503315 C1orf167Q5SNV9 1468 aa10.05□□□□□ -0.8
PTCD2-206ENST00000503315 SLC4A3P48751 1232 aa10.05□□□□□ -0.8
PTCD2-206ENST00000503315 PTK7Q13308 1070 aa10.05□□□□□ -0.8
PTCD2-206ENST00000503315 ANKMY2Q8IV38 441 aa10.05□□□□□ -0.8
PTCD2-206ENST00000503315 DEPDC4Q8N2C3 294 aa10.05□□□□□ -0.8
PTCD2-206ENST00000503315 LZTS3O60299 673 aaPredicted RBP10.04□□□□□ -0.8
PTCD2-206ENST00000503315 ABL1P00519 1130 aa10.04□□□□□ -0.8
PTCD2-206ENST00000503315 HLA-CQ95604 372 aa10.04□□□□□ -0.8
PTCD2-206ENST00000503315 ORAI2Q96SN7 254 aa10.04□□□□□ -0.8
PTCD2-206ENST00000503315 ANKRD30BQ9BXX2 1392 aa10.04□□□□□ -0.8
PTCD2-206ENST00000503315 EGFL7Q9UHF1 273 aa10.04□□□□□ -0.8
PTCD2-206ENST00000503315 PPP1R3GB7ZBB8 358 aa10.03□□□□□ -0.8
PTCD2-206ENST00000503315 MEX3CQ5U5Q3 659 aaKnown RBP10.03□□□□□ -0.8
PTCD2-206ENST00000503315 ZNF772Q68DY9 489 aaPredicted RBP10.03□□□□□ -0.8
PTCD2-206ENST00000503315 ZSCAN29Q8IWY8 852 aaPredicted RBP10.03□□□□□ -0.8
PTCD2-206ENST00000503315 ANKRD13AQ8IZ07 590 aa10.03□□□□□ -0.8
PTCD2-206ENST00000503315 C1orf216Q8TAB5 229 aa10.03□□□□□ -0.8
PTCD2-206ENST00000503315 KNDC1Q76NI1 1749 aa10.03□□□□□ -0.8
PTCD2-206ENST00000503315 SNPHO15079 494 aa10.02□□□□□ -0.81
PTCD2-206ENST00000503315 FBXO45P0C2W1 286 aa10.02□□□□□ -0.81
PTCD2-206ENST00000503315 MAPK1P28482 360 aa10.02□□□□□ -0.81
PTCD2-206ENST00000503315 TSNAXIP1Q2TAA8 658 aa10.02□□□□□ -0.81
PTCD2-206ENST00000503315 SLFNL1Q499Z3 407 aa10.02□□□□□ -0.81
PTCD2-206ENST00000503315 GLYCTKQ8IVS8 523 aa10.02□□□□□ -0.81
PTCD2-206ENST00000503315 MARVELD3Q96A59 401 aa10.02□□□□□ -0.81
PTCD2-206ENST00000503315 RGPD8O14715 1765 aaPredicted RBP10.02□□□□□ -0.81
PTCD2-206ENST00000503315 TECPR2O15040 1411 aa10.01□□□□□ -0.81
PTCD2-206ENST00000503315 PIK3C2GO75747 1445 aa10.01□□□□□ -0.81
PTCD2-206ENST00000503315 SOS2Q07890 1332 aaPredicted RBP10.01□□□□□ -0.81
PTCD2-206ENST00000503315 TRIM6-TRIM34B2RNG4 842 aa10.01□□□□□ -0.81
PTCD2-206ENST00000503315 COL9A1P20849 921 aa10.01□□□□□ -0.81
PTCD2-206ENST00000503315 ERCC5P28715 1186 aaPredicted RBP10.01□□□□□ -0.81
PTCD2-206ENST00000503315 TMEM132EQ6IEE7 984 aa10.01□□□□□ -0.81
PTCD2-206ENST00000503315 WAPLQ7Z5K2 1190 aa10.01□□□□□ -0.81
PTCD2-206ENST00000503315 POLR3GLQ9BT43 218 aa10.01□□□□□ -0.81
PTCD2-206ENST00000503315 PCGF6Q9BYE7 350 aa10.01□□□□□ -0.81
PTCD2-206ENST00000503315 PNPLA6Q8IY17 1366 aa10.01□□□□□ -0.81
PTCD2-206ENST00000503315 ABCC11Q96J66 1382 aa10.01□□□□□ -0.81
PTCD2-206ENST00000503315 H3BRB1 525 aa10□□□□□ -0.81
PTCD2-206ENST00000503315 RECKO95980 971 aa10□□□□□ -0.81
PTCD2-206ENST00000503315 NCOA4Q13772 614 aa10□□□□□ -0.81
PTCD2-206ENST00000503315 PPP4R3BQ5MIZ7 849 aa10□□□□□ -0.81
PTCD2-206ENST00000503315 RNF135Q8IUD6 432 aa10□□□□□ -0.81
PTCD2-206ENST00000503315 TUT1Q9H6E5 874 aaKnown RBP10□□□□□ -0.81
PTCD2-206ENST00000503315 C14orf93Q9H972 538 aaKnown RBP10□□□□□ -0.81
PTCD2-206ENST00000503315 STK26Q9P289 416 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms