RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 SLC27A3Q5K4L6 730 aa11.09□□□□□ -0.63
NEDD4-203ENST00000502612 TMEM214Q6NUQ4 689 aaKnown RBP11.09□□□□□ -0.63
NEDD4-203ENST00000502612 TRIM46Q7Z4K8 759 aa11.09□□□□□ -0.63
NEDD4-203ENST00000502612 VTI1AQ96AJ9 217 aa11.09□□□□□ -0.63
NEDD4-203ENST00000502612 NGLY1Q96IV0 654 aa11.09□□□□□ -0.63
NEDD4-203ENST00000502612 NOS2P35228 1153 aa11.08□□□□□ -0.64
NEDD4-203ENST00000502612 TEAD4Q15561 434 aa11.08□□□□□ -0.64
NEDD4-203ENST00000502612 POTEAQ6S8J7 498 aa11.08□□□□□ -0.64
NEDD4-203ENST00000502612 STAG2Q8N3U4 1231 aa11.08□□□□□ -0.64
NEDD4-203ENST00000502612 NBPF15Q8N660 670 aa11.08□□□□□ -0.64
NEDD4-203ENST00000502612 COL26A1Q96A83 441 aa11.08□□□□□ -0.64
NEDD4-203ENST00000502612 QTRT2Q9H974 415 aaKnown RBP11.08□□□□□ -0.64
NEDD4-203ENST00000502612 ZNF232Q9UNY5 417 aa11.08□□□□□ -0.64
NEDD4-203ENST00000502612 MTMR7Q9Y216 660 aa11.08□□□□□ -0.64
NEDD4-203ENST00000502612 HCN4Q9Y3Q4 1203 aa11.08□□□□□ -0.64
NEDD4-203ENST00000502612 SERTM1A2A2V5 107 aa11.07□□□□□ -0.64
NEDD4-203ENST00000502612 UPP2O95045 317 aa11.07□□□□□ -0.64
NEDD4-203ENST00000502612 PKDCCQ504Y2 493 aa11.07□□□□□ -0.64
NEDD4-203ENST00000502612 C4orf17Q53FE4 359 aa11.07□□□□□ -0.64
NEDD4-203ENST00000502612 RNF217Q8TC41 542 aa11.07□□□□□ -0.64
NEDD4-203ENST00000502612 L3MBTL2Q969R5 705 aa11.07□□□□□ -0.64
NEDD4-203ENST00000502612 NRG2O14511 850 aaPredicted RBP11.06□□□□□ -0.64
NEDD4-203ENST00000502612 ICMTO60725 284 aa11.06□□□□□ -0.64
NEDD4-203ENST00000502612 GPC1P35052 558 aa11.06□□□□□ -0.64
NEDD4-203ENST00000502612 PHKA2P46019 1235 aa11.06□□□□□ -0.64
NEDD4-203ENST00000502612 PLA2G4AP47712 749 aa11.06□□□□□ -0.64
NEDD4-203ENST00000502612 COX20Q5RI15 118 aa11.06□□□□□ -0.64
NEDD4-203ENST00000502612 RHBDD1Q8TEB9 315 aa11.06□□□□□ -0.64
NEDD4-203ENST00000502612 EGFL7Q9UHF1 273 aa11.06□□□□□ -0.64
NEDD4-203ENST00000502612 ST8SIA5O15466 376 aa11.05□□□□□ -0.64
NEDD4-203ENST00000502612 TXLNAP40222 546 aa11.05□□□□□ -0.64
NEDD4-203ENST00000502612 ECM1Q16610 540 aa11.05□□□□□ -0.64
NEDD4-203ENST00000502612 CCDC27Q2M243 656 aa11.05□□□□□ -0.64
NEDD4-203ENST00000502612 C16orf46Q6P387 395 aa11.05□□□□□ -0.64
NEDD4-203ENST00000502612 PRICKLE2Q7Z3G6 844 aa11.05□□□□□ -0.64
NEDD4-203ENST00000502612 HELQQ8TDG4 1101 aa11.05□□□□□ -0.64
NEDD4-203ENST00000502612 NIFKQ9BYG3 293 aaKnown RBP11.05□□□□□ -0.64
NEDD4-203ENST00000502612 BIN2Q9UBW5 565 aaPredicted RBP11.05□□□□□ -0.64
NEDD4-203ENST00000502612 LRFN2Q9ULH4 789 aa11.05□□□□□ -0.64
NEDD4-203ENST00000502612 CHMP3Q9Y3E7 222 aa11.05□□□□□ -0.64
NEDD4-203ENST00000502612 DGAT1O75907 488 aa11.04□□□□□ -0.64
NEDD4-203ENST00000502612 GLYCTKQ8IVS8 523 aa11.04□□□□□ -0.64
NEDD4-203ENST00000502612 FIGNL2A6NMB9 653 aa11.03□□□□□ -0.64
NEDD4-203ENST00000502612 TNFRSF10BO14763 440 aa11.03□□□□□ -0.64
NEDD4-203ENST00000502612 GTF2E1P29083 439 aaPredicted RBP11.03□□□□□ -0.64
NEDD4-203ENST00000502612 SMCPP49901 116 aaPredicted RBP11.03□□□□□ -0.64
NEDD4-203ENST00000502612 POU4F2Q12837 409 aa11.03□□□□□ -0.64
NEDD4-203ENST00000502612 FAM26DQ5JW98 314 aa11.03□□□□□ -0.64
NEDD4-203ENST00000502612 GNASQ5JWF2 1037 aa11.03□□□□□ -0.64
NEDD4-203ENST00000502612 ALDH16A1Q8IZ83 802 aa11.03□□□□□ -0.64
NEDD4-203ENST00000502612 KLRG1Q96E93 195 aa11.03□□□□□ -0.64
NEDD4-203ENST00000502612 PHACTR1Q9C0D0 580 aa11.03□□□□□ -0.64
NEDD4-203ENST00000502612 AXIN1O15169 862 aa11.02□□□□□ -0.65
NEDD4-203ENST00000502612 RHOQP17081 205 aa11.02□□□□□ -0.65
NEDD4-203ENST00000502612 HIRAP54198 1017 aaPredicted RBP11.02□□□□□ -0.65
NEDD4-203ENST00000502612 ZFP42Q96MM3 310 aa11.02□□□□□ -0.65
NEDD4-203ENST00000502612 DACH1Q9UI36 760 aa11.02□□□□□ -0.65
NEDD4-203ENST00000502612 TTLL8A6PVC2 850 aa11.01□□□□□ -0.65
NEDD4-203ENST00000502612 SPATA31C2B4DYI2 1134 aa11.01□□□□□ -0.65
NEDD4-203ENST00000502612 MPSTP25325 297 aa11.01□□□□□ -0.65
NEDD4-203ENST00000502612 FKBP4Q02790 459 aaKnown RBP eCLIP11.01□□□□□ -0.65
NEDD4-203ENST00000502612 SCARF1Q14162 830 aa11.01□□□□□ -0.65
NEDD4-203ENST00000502612 CTC1Q2NKJ3 1217 aa11.01□□□□□ -0.65
NEDD4-203ENST00000502612 RGS22Q8NE09 1264 aa11.01□□□□□ -0.65
NEDD4-203ENST00000502612 SOS2Q07890 1332 aaPredicted RBP11.01□□□□□ -0.65
NEDD4-203ENST00000502612 NBPF10Q6P3W6 841 aaKnown RBP11□□□□□ -0.65
NEDD4-203ENST00000502612 KLK14Q9P0G3 267 aa11□□□□□ -0.65
NEDD4-203ENST00000502612 ARHGAP4P98171 946 aa10.99□□□□□ -0.65
NEDD4-203ENST00000502612 SF3B2Q13435 895 aaKnown RBP10.99□□□□□ -0.65
NEDD4-203ENST00000502612 DGKZQ13574 1117 aa10.99□□□□□ -0.65
NEDD4-203ENST00000502612 NOM1Q5C9Z4 860 aaKnown RBP10.99□□□□□ -0.65
NEDD4-203ENST00000502612 LYSMD3Q7Z3D4 306 aa10.99□□□□□ -0.65
NEDD4-203ENST00000502612 CRIPAKQ8N1N5 446 aa10.99□□□□□ -0.65
NEDD4-203ENST00000502612 FOXD4L4Q8WXT5 416 aaPredicted RBP10.99□□□□□ -0.65
NEDD4-203ENST00000502612 MYO19Q96H55 970 aa10.99□□□□□ -0.65
NEDD4-203ENST00000502612 AAASQ9NRG9 546 aa10.99□□□□□ -0.65
NEDD4-203ENST00000502612 AIDAQ96BJ3 306 aa10.98□□□□□ -0.65
NEDD4-203ENST00000502612 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.98□□□□□ -0.655e-8■■■■■ 137
NEDD4-203ENST00000502612 DNMT3LQ9UJW3 386 aa10.98□□□□□ -0.65
NEDD4-203ENST00000502612 RTN1Q16799 776 aa10.97□□□□□ -0.65
NEDD4-203ENST00000502612 SOBPA7XYQ1 873 aa10.96□□□□□ -0.65
NEDD4-203ENST00000502612 ZBTB39O15060 712 aa10.96□□□□□ -0.65
NEDD4-203ENST00000502612 ATP13A2Q9NQ11 1180 aa10.96□□□□□ -0.65
NEDD4-203ENST00000502612 NPR3P17342 541 aa10.95□□□□□ -0.66
NEDD4-203ENST00000502612 ATP4AP20648 1035 aa10.95□□□□□ -0.66
NEDD4-203ENST00000502612 C7orf43Q8WVR3 580 aa10.95□□□□□ -0.66
NEDD4-203ENST00000502612 STIM2Q9P246 746 aa10.95□□□□□ -0.66
NEDD4-203ENST00000502612 BCS1LQ9Y276 419 aa10.95□□□□□ -0.66
NEDD4-203ENST00000502612 MARSP56192 900 aaKnown RBP10.94□□□□□ -0.66
NEDD4-203ENST00000502612 DNAJC14Q6Y2X3 702 aaPredicted RBP10.94□□□□□ -0.66
NEDD4-203ENST00000502612 ATCAYQ86WG3 371 aa10.94□□□□□ -0.66
NEDD4-203ENST00000502612 ETFBKMTQ8IXQ9 262 aa10.94□□□□□ -0.66
NEDD4-203ENST00000502612 RHPN1Q8TCX5 695 aa10.94□□□□□ -0.66
NEDD4-203ENST00000502612 EIF1AXP47813 144 aaKnown RBP10.93□□□□□ -0.66
NEDD4-203ENST00000502612 NBPF1Q3BBV0 1214 aa10.93□□□□□ -0.66
NEDD4-203ENST00000502612 C1orf53Q5VUE5 145 aa10.93□□□□□ -0.66
NEDD4-203ENST00000502612 HSH2DQ96JZ2 352 aa10.93□□□□□ -0.66
NEDD4-203ENST00000502612 TIMMDC1Q9NPL8 285 aa10.93□□□□□ -0.66
NEDD4-203ENST00000502612 FAM13AO94988 1023 aa10.92□□□□□ -0.66
NEDD4-203ENST00000502612 MAPK1P28482 360 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms