RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 SPOCK3Q9BQ16 436 aa11.07□□□□□ -0.64
FN1-227ENST00000498719 CHPF2Q9P2E5 772 aa11.07□□□□□ -0.64
FN1-227ENST00000498719 SETD1AO15047 1707 aaKnown RBP11.07□□□□□ -0.64
FN1-227ENST00000498719 FAM135BQ49AJ0 1406 aa11.07□□□□□ -0.64
FN1-227ENST00000498719 RIMS2Q9UQ26 1411 aa11.07□□□□□ -0.64
FN1-227ENST00000498719 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
FN1-227ENST00000498719 IGBP1P78318 339 aa11.07□□□□□ -0.64
FN1-227ENST00000498719 CCDC181Q5TID7 509 aa11.07□□□□□ -0.64
FN1-227ENST00000498719 TSPYL6Q8N831 410 aa11.07□□□□□ -0.64
FN1-227ENST00000498719 CRISPLD2Q9H0B8 497 aa11.07□□□□□ -0.64
FN1-227ENST00000498719 PIF1Q9H611 641 aa11.07□□□□□ -0.64
FN1-227ENST00000498719 RIMBP3CA6NJZ7 1639 aa11.06□□□□□ -0.64
FN1-227ENST00000498719 RIMBP3BA6NNM3 1639 aa11.06□□□□□ -0.64
FN1-227ENST00000498719 RIMBP3Q9UFD9 1639 aa11.06□□□□□ -0.64
FN1-227ENST00000498719 VAMP1P23763 118 aa11.06□□□□□ -0.64
FN1-227ENST00000498719 ERCC5P28715 1186 aaPredicted RBP11.06□□□□□ -0.64
FN1-227ENST00000498719 GNPATO15228 680 aa11.06□□□□□ -0.64
FN1-227ENST00000498719 RRS1Q15050 365 aaKnown RBP11.06□□□□□ -0.64
FN1-227ENST00000498719 CCDC144BQ3MJ40 725 aa11.06□□□□□ -0.64
FN1-227ENST00000498719 FBXO22Q8NEZ5 403 aa11.06□□□□□ -0.64
FN1-227ENST00000498719 DHX38Q92620 1227 aaKnown RBP11.06□□□□□ -0.64
FN1-227ENST00000498719 KIF16BQ96L93 1317 aa11.05□□□□□ -0.64
FN1-227ENST00000498719 METP08581 1390 aa11.05□□□□□ -0.64
FN1-227ENST00000498719 ZMYM3Q14202 1370 aa11.05□□□□□ -0.64
FN1-227ENST00000498719 ANKRD33BA6NCL7 494 aa11.05□□□□□ -0.64
FN1-227ENST00000498719 TSNAXIP1Q2TAA8 658 aa11.05□□□□□ -0.64
FN1-227ENST00000498719 KCNB2Q92953 911 aa11.05□□□□□ -0.64
FN1-227ENST00000498719 PNNQ9H307 717 aaKnown RBP11.05□□□□□ -0.64
FN1-227ENST00000498719 ANTXR1Q9H6X2 564 aa11.05□□□□□ -0.64
FN1-227ENST00000498719 CDC42BPGQ6DT37 1551 aa11.05□□□□□ -0.64
FN1-227ENST00000498719 LMOD1P29536 600 aaPredicted RBP11.05□□□□□ -0.64
FN1-227ENST00000498719 SDE2Q6IQ49 451 aa11.05□□□□□ -0.64
FN1-227ENST00000498719 BANK1Q8NDB2 785 aa11.05□□□□□ -0.64
FN1-227ENST00000498719 UBA5Q9GZZ9 404 aa11.05□□□□□ -0.64
FN1-227ENST00000498719 DLG5Q8TDM6 1919 aa11.05□□□□□ -0.64
FN1-227ENST00000498719 PPIP5K1Q6PFW1 1433 aa11.05□□□□□ -0.64
FN1-227ENST00000498719 ATP7BP35670 1465 aa11.04□□□□□ -0.64
FN1-227ENST00000498719 WASLO00401 505 aaPredicted RBP11.04□□□□□ -0.64
FN1-227ENST00000498719 IPO8O15397 1037 aaKnown RBP11.04□□□□□ -0.64
FN1-227ENST00000498719 RBM10P98175 930 aaKnown RBP11.04□□□□□ -0.64
FN1-227ENST00000498719 NFE2L2Q16236 605 aa11.04□□□□□ -0.64
FN1-227ENST00000498719 DIP2BQ9P265 1576 aa11.04□□□□□ -0.64
FN1-227ENST00000498719 FAM83GA6ND36 823 aa11.04□□□□□ -0.64
FN1-227ENST00000498719 PALM3A6NDB9 673 aaPredicted RBP11.04□□□□□ -0.64
FN1-227ENST00000498719 DPYSL4O14531 572 aa11.04□□□□□ -0.64
FN1-227ENST00000498719 VAMP4O75379 141 aa11.04□□□□□ -0.64
FN1-227ENST00000498719 IL13P35225 146 aa11.04□□□□□ -0.64
FN1-227ENST00000498719 LONRF3Q496Y0 759 aa11.04□□□□□ -0.64
FN1-227ENST00000498719 ZFYVE27Q5T4F4 411 aa11.04□□□□□ -0.64
FN1-227ENST00000498719 C22orf23Q9BZE7 217 aa11.04□□□□□ -0.64
FN1-227ENST00000498719 TBX22Q9Y458 520 aa11.04□□□□□ -0.64
FN1-227ENST00000498719 NRXN3Q9Y4C0 1643 aa11.04□□□□□ -0.64
FN1-227ENST00000498719 DCTN1Q14203 1278 aa11.03□□□□□ -0.64
FN1-227ENST00000498719 ALDH1L2Q3SY69 923 aa11.03□□□□□ -0.64
FN1-227ENST00000498719 DLC1Q96QB1 1528 aa11.03□□□□□ -0.64
FN1-227ENST00000498719 CPSF1Q10570 1443 aaKnown RBP11.03□□□□□ -0.64
FN1-227ENST00000498719 TCEAL1Q15170 157 aa11.03□□□□□ -0.64
FN1-227ENST00000498719 MBIPQ9NS73 344 aa11.03□□□□□ -0.64
FN1-227ENST00000498719 CPS1P31327 1500 aa11.02□□□□□ -0.64
FN1-227ENST00000498719 SPATA31D1Q6ZQQ2 1576 aa11.02□□□□□ -0.64
FN1-227ENST00000498719 SECISBP2LQ93073 1101 aaKnown RBP11.02□□□□□ -0.65
FN1-227ENST00000498719 NUDT16Q96DE0 195 aaKnown RBP11.02□□□□□ -0.65
FN1-227ENST00000498719 TANGO6Q9C0B7 1094 aa11.02□□□□□ -0.65
FN1-227ENST00000498719 MAGEC2Q9UBF1 373 aaPredicted RBP11.02□□□□□ -0.65
FN1-227ENST00000498719 NUCB1Q02818 461 aa11.01□□□□□ -0.65
FN1-227ENST00000498719 MRPL50Q8N5N7 158 aaKnown RBP11.01□□□□□ -0.65
FN1-227ENST00000498719 EDC4Q6P2E9 1401 aaKnown RBP11.01□□□□□ -0.65
FN1-227ENST00000498719 ZBTB7BO15156 539 aaPredicted RBP11.01□□□□□ -0.65
FN1-227ENST00000498719 APLP1P51693 650 aa11.01□□□□□ -0.65
FN1-227ENST00000498719 C8orf58Q8NAV2 365 aa11.01□□□□□ -0.65
FN1-227ENST00000498719 FARP1Q9Y4F1 1045 aaPredicted RBP11.01□□□□□ -0.65
FN1-227ENST00000498719 SH3BP5O60239 455 aa11□□□□□ -0.65
FN1-227ENST00000498719 MARSP56192 900 aaKnown RBP11□□□□□ -0.65
FN1-227ENST00000498719 CHD1LQ86WJ1 897 aa11□□□□□ -0.65
FN1-227ENST00000498719 COG3Q96JB2 828 aa11□□□□□ -0.65
FN1-227ENST00000498719 AGLP35573 1532 aa11□□□□□ -0.65
FN1-227ENST00000498719 ATG7O95352 703 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 TWISTNBQ3B726 338 aaPredicted RBP10.99□□□□□ -0.65
FN1-227ENST00000498719 ANKRD45Q5TZF3 282 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 PIK3R5Q8WYR1 880 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 MAF1Q9H063 256 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 CDK12Q9NYV4 1490 aaPredicted RBP10.99□□□□□ -0.65
FN1-227ENST00000498719 PRR36Q9H6K5 1346 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 ZNF853P0CG23 659 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 GNAI1P63096 354 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 MYSM1Q5VVJ2 828 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 SIRT2Q8IXJ6 389 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 MTA3Q9BTC8 594 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 BEGAINQ9BUH8 593 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 TMUB1Q9BVT8 246 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 IFT57Q9NWB7 429 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 CCDC61Q9Y6R9 512 aa10.99□□□□□ -0.65
FN1-227ENST00000498719 KRT24Q2M2I5 525 aa10.98□□□□□ -0.65
FN1-227ENST00000498719 MAMSTRQ6ZN01 415 aa10.98□□□□□ -0.65
FN1-227ENST00000498719 REREQ9P2R6 1566 aa10.98□□□□□ -0.65
FN1-227ENST00000498719 MON2Q7Z3U7 1717 aa10.98□□□□□ -0.65
FN1-227ENST00000498719 IQSEC3Q9UPP2 1182 aaPredicted RBP10.98□□□□□ -0.65
FN1-227ENST00000498719 HDLBPQ00341 1268 aaKnown RBP10.97□□□□□ -0.65
FN1-227ENST00000498719 CLEC4GQ6UXB4 293 aa10.97□□□□□ -0.65
FN1-227ENST00000498719 PTCH1Q13635 1447 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms