RNA–Protein interactions for RNA: ENST00000498449.5

SYNPR-215, Transcript of synaptoporin, humanhuman

TSL 2

Gene SYNPR, Length 1,296 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPR-215ENST00000498449 FRAT1Q92837 279 aaPredicted RBP17.6■□□□□ 0.41
SYNPR-215ENST00000498449 CHPF2Q9P2E5 772 aa17.6■□□□□ 0.41
SYNPR-215ENST00000498449 RREB1Q92766 1687 aa17.59■□□□□ 0.41
SYNPR-215ENST00000498449 LOC102724428A0A0B4J2F2 783 aa17.59■□□□□ 0.41
SYNPR-215ENST00000498449 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
SYNPR-215ENST00000498449 SIK1P57059 783 aa17.59■□□□□ 0.41
SYNPR-215ENST00000498449 ZKSCAN2Q63HK3 967 aa17.59■□□□□ 0.41
SYNPR-215ENST00000498449 TEX13AQ9BXU3 409 aaPredicted RBP17.59■□□□□ 0.41
SYNPR-215ENST00000498449 NOB1Q9ULX3 412 aaKnown RBP17.59■□□□□ 0.41
SYNPR-215ENST00000498449 MYH14Q7Z406 1995 aaKnown RBP17.59■□□□□ 0.41
SYNPR-215ENST00000498449 ERBB4Q15303 1308 aa17.58■□□□□ 0.4
SYNPR-215ENST00000498449 TRIM37O94972 964 aa17.58■□□□□ 0.4
SYNPR-215ENST00000498449 NEFLP07196 543 aa17.58■□□□□ 0.4
SYNPR-215ENST00000498449 G2E3Q7L622 706 aa17.58■□□□□ 0.4
SYNPR-215ENST00000498449 DBF4Q9UBU7 674 aaPredicted RBP17.58■□□□□ 0.4
SYNPR-215ENST00000498449 IPO8O15397 1037 aaKnown RBP17.57■□□□□ 0.4
SYNPR-215ENST00000498449 ANXA1P04083 346 aa17.57■□□□□ 0.4
SYNPR-215ENST00000498449 IRX6P78412 446 aaPredicted RBP17.57■□□□□ 0.4
SYNPR-215ENST00000498449 PROSER3Q2NL68 480 aa17.57■□□□□ 0.4
SYNPR-215ENST00000498449 DDX21Q9NR30 783 aaKnown RBP eCLIP17.57■□□□□ 0.4
SYNPR-215ENST00000498449 N4BP2Q86UW6 1770 aaPredicted RBP17.57■□□□□ 0.4
SYNPR-215ENST00000498449 PDIA6Q15084 440 aa17.56■□□□□ 0.4
SYNPR-215ENST00000498449 ATF7IPQ6VMQ6 1270 aa17.56■□□□□ 0.4
SYNPR-215ENST00000498449 ARHGAP45Q92619 1136 aa17.56■□□□□ 0.4
SYNPR-215ENST00000498449 TNNQ9UQP3 1299 aa17.56■□□□□ 0.4
SYNPR-215ENST00000498449 RGPD3A6NKT7 1758 aaPredicted RBP17.56■□□□□ 0.4
SYNPR-215ENST00000498449 RGPD4Q7Z3J3 1758 aa17.56■□□□□ 0.4
SYNPR-215ENST00000498449 PTPRCP08575 1304 aa17.55■□□□□ 0.4
SYNPR-215ENST00000498449 STARD3NLO95772 234 aa17.55■□□□□ 0.4
SYNPR-215ENST00000498449 TRIM27P14373 513 aa17.55■□□□□ 0.4
SYNPR-215ENST00000498449 ATP6V1AP38606 617 aa17.55■□□□□ 0.4
SYNPR-215ENST00000498449 FLIIQ13045 1269 aa17.55■□□□□ 0.4
SYNPR-215ENST00000498449 ITPK1Q13572 414 aa17.55■□□□□ 0.4
SYNPR-215ENST00000498449 PDE3AQ14432 1141 aa17.55■□□□□ 0.4
SYNPR-215ENST00000498449 C20orf194Q5TEA3 1177 aa17.55■□□□□ 0.4
SYNPR-215ENST00000498449 HYPKQ9NX55 129 aa17.55■□□□□ 0.4
SYNPR-215ENST00000498449 CYP19A1P11511 503 aaPredicted RBP17.54■□□□□ 0.4
SYNPR-215ENST00000498449 API5Q9BZZ5 524 aaKnown RBP17.54■□□□□ 0.4
SYNPR-215ENST00000498449 NBPF26B4DH59 902 aa17.53■□□□□ 0.4
SYNPR-215ENST00000498449 A1BGP04217 495 aa17.53■□□□□ 0.4
SYNPR-215ENST00000498449 MS4A1P11836 297 aa17.53■□□□□ 0.4
SYNPR-215ENST00000498449 NBPF14Q5TI25 921 aa17.53■□□□□ 0.4
SYNPR-215ENST00000498449 NBPF10Q6P3W6 841 aaKnown RBP17.53■□□□□ 0.4
SYNPR-215ENST00000498449 LRP10Q7Z4F1 713 aa17.53■□□□□ 0.4
SYNPR-215ENST00000498449 NBPF15Q8N660 670 aa17.53■□□□□ 0.4
SYNPR-215ENST00000498449 PANK1Q8TE04 598 aa17.53■□□□□ 0.4
SYNPR-215ENST00000498449 PHAXQ9H814 394 aaKnown RBP17.53■□□□□ 0.4
SYNPR-215ENST00000498449 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
SYNPR-215ENST00000498449 ABCC4O15439 1325 aa17.52■□□□□ 0.4
SYNPR-215ENST00000498449 RLBP1P12271 317 aa17.52■□□□□ 0.4
SYNPR-215ENST00000498449 MYL6BP14649 208 aa17.52■□□□□ 0.4
SYNPR-215ENST00000498449 PIP4K2AP48426 406 aaPredicted RBP17.52■□□□□ 0.4
SYNPR-215ENST00000498449 DZIP1LQ8IYY4 767 aaKnown RBP17.52■□□□□ 0.4
SYNPR-215ENST00000498449 CLUAP1Q96AJ1 413 aa17.52■□□□□ 0.4
SYNPR-215ENST00000498449 NUP188Q5SRE5 1749 aa17.52■□□□□ 0.39
SYNPR-215ENST00000498449 C4BP0C0L5 1744 aa17.51■□□□□ 0.39
SYNPR-215ENST00000498449 FKBP5Q13451 457 aaPredicted RBP17.51■□□□□ 0.39
SYNPR-215ENST00000498449 FKBP8Q14318 412 aa17.51■□□□□ 0.39
SYNPR-215ENST00000498449 FTSJ3Q8IY81 847 aaKnown RBP17.51■□□□□ 0.39
SYNPR-215ENST00000498449 CCNL1Q9UK58 526 aaPredicted RBP17.51■□□□□ 0.39
SYNPR-215ENST00000498449 LINC00116Q8NCU8 138 aa17.5■□□□□ 0.39
SYNPR-215ENST00000498449 XAGE3Q8WTP9 111 aa17.5■□□□□ 0.39
SYNPR-215ENST00000498449 CRBNQ96SW2 442 aa17.5■□□□□ 0.39
SYNPR-215ENST00000498449 ZBTB1Q9Y2K1 713 aa17.5■□□□□ 0.39
SYNPR-215ENST00000498449 PXDNLA1KZ92 1463 aa17.5■□□□□ 0.39
SYNPR-215ENST00000498449 CRKLP46109 303 aaKnown RBP17.49■□□□□ 0.39
SYNPR-215ENST00000498449 KCNQ4P56696 695 aa17.49■□□□□ 0.39
SYNPR-215ENST00000498449 CCDC87Q9NVE4 849 aa17.49■□□□□ 0.39
SYNPR-215ENST00000498449 ADCY9O60503 1353 aa17.49■□□□□ 0.39
SYNPR-215ENST00000498449 CNTNAP4Q9C0A0 1308 aa17.48■□□□□ 0.39
SYNPR-215ENST00000498449 APBA3O96018 575 aa17.48■□□□□ 0.39
SYNPR-215ENST00000498449 INTS5Q6P9B9 1019 aaKnown RBP17.48■□□□□ 0.39
SYNPR-215ENST00000498449 COPS6Q7L5N1 327 aa17.48■□□□□ 0.39
SYNPR-215ENST00000498449 TMEM57Q8N5G2 664 aa17.48■□□□□ 0.39
SYNPR-215ENST00000498449 GTF3C3Q9Y5Q9 886 aa17.48■□□□□ 0.39
SYNPR-215ENST00000498449 F6X3S4 739 aa17.47■□□□□ 0.39
SYNPR-215ENST00000498449 PLSCR1O15162 318 aa17.47■□□□□ 0.39
SYNPR-215ENST00000498449 AIMP1Q12904 312 aaKnown RBP17.47■□□□□ 0.39
SYNPR-215ENST00000498449 COG6Q9Y2V7 657 aa17.47■□□□□ 0.39
SYNPR-215ENST00000498449 AFDNP55196 1824 aaKnown RBP17.47■□□□□ 0.39
SYNPR-215ENST00000498449 UBR3Q6ZT12 1888 aa17.46■□□□□ 0.39
SYNPR-215ENST00000498449 PI4KAP2A4QPH2 592 aa17.46■□□□□ 0.39
SYNPR-215ENST00000498449 DDX58O95786 925 aaKnown RBP17.46■□□□□ 0.39
SYNPR-215ENST00000498449 IL6STP40189 918 aaPredicted RBP17.46■□□□□ 0.39
SYNPR-215ENST00000498449 SLC27A3Q5K4L6 730 aa17.46■□□□□ 0.39
SYNPR-215ENST00000498449 PI4KAP1Q8N8J0 262 aa17.46■□□□□ 0.39
SYNPR-215ENST00000498449 EXOC6Q8TAG9 804 aa17.46■□□□□ 0.39
SYNPR-215ENST00000498449 LRRC4BQ9NT99 713 aa17.46■□□□□ 0.39
SYNPR-215ENST00000498449 NUP98P52948 1817 aa17.46■□□□□ 0.39
SYNPR-215ENST00000498449 MVPQ14764 893 aaKnown RBP17.45■□□□□ 0.38
SYNPR-215ENST00000498449 TXNRD1Q16881 649 aa17.45■□□□□ 0.38
SYNPR-215ENST00000498449 RC3H1Q5TC82 1133 aaKnown RBP17.45■□□□□ 0.38
SYNPR-215ENST00000498449 KSR2Q6VAB6 950 aa17.45■□□□□ 0.38
SYNPR-215ENST00000498449 TTLL7Q6ZT98 887 aa17.45■□□□□ 0.38
SYNPR-215ENST00000498449 ANKRD36CQ5JPF3 1778 aa17.45■□□□□ 0.38
SYNPR-215ENST00000498449 BCORQ6W2J9 1755 aa17.45■□□□□ 0.38
SYNPR-215ENST00000498449 EIF5P55010 431 aaKnown RBP17.44■□□□□ 0.38
SYNPR-215ENST00000498449 ERICH6BQ5W0A0 696 aa17.44■□□□□ 0.38
SYNPR-215ENST00000498449 INTS3Q68E01 1043 aaKnown RBP17.44■□□□□ 0.38
SYNPR-215ENST00000498449 SLC4A10Q6U841 1118 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms