RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 LINC00116Q8NCU8 138 aa13.16□□□□□ -0.3
TSPAN1-209ENST00000498443 GAS2L2Q8NHY3 880 aa13.16□□□□□ -0.3
TSPAN1-209ENST00000498443 SCN11AQ9UI33 1791 aa13.15□□□□□ -0.3
TSPAN1-209ENST00000498443 LOC102724428A0A0B4J2F2 783 aa13.15□□□□□ -0.3
TSPAN1-209ENST00000498443 PRAMEF22A3QJZ6 481 aa13.15□□□□□ -0.3
TSPAN1-209ENST00000498443 HSP90AB1P08238 724 aaKnown RBP13.15□□□□□ -0.3
TSPAN1-209ENST00000498443 SIK1P57059 783 aa13.15□□□□□ -0.3
TSPAN1-209ENST00000498443 IRX6P78412 446 aaPredicted RBP13.15□□□□□ -0.3
TSPAN1-209ENST00000498443 WDR43Q15061 677 aaKnown RBP eCLIP13.15□□□□□ -0.3
TSPAN1-209ENST00000498443 NFE2L2Q16236 605 aa13.15□□□□□ -0.3
TSPAN1-209ENST00000498443 NGEFQ8N5V2 710 aa13.15□□□□□ -0.3
TSPAN1-209ENST00000498443 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.31
TSPAN1-209ENST00000498443 FANCIQ9NVI1 1328 aa13.14□□□□□ -0.31
TSPAN1-209ENST00000498443 VIRMAQ69YN4 1812 aaKnown RBP13.14□□□□□ -0.31
TSPAN1-209ENST00000498443 A0A0G2JLW4 131 aa13.14□□□□□ -0.31
TSPAN1-209ENST00000498443 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
TSPAN1-209ENST00000498443 APAF1O14727 1248 aa13.13□□□□□ -0.31
TSPAN1-209ENST00000498443 ATP6V1AP38606 617 aa13.13□□□□□ -0.31
TSPAN1-209ENST00000498443 RIPK4P57078 832 aa13.13□□□□□ -0.31
TSPAN1-209ENST00000498443 TRIM35Q9UPQ4 493 aa13.13□□□□□ -0.31
TSPAN1-209ENST00000498443 SALL2Q9Y467 1007 aaPredicted RBP13.13□□□□□ -0.31
TSPAN1-209ENST00000498443 DLG5Q8TDM6 1919 aa13.13□□□□□ -0.31
TSPAN1-209ENST00000498443 UBR3Q6ZT12 1888 aa13.12□□□□□ -0.31
TSPAN1-209ENST00000498443 GNPATO15228 680 aa13.12□□□□□ -0.31
TSPAN1-209ENST00000498443 MMP10P09238 476 aa13.12□□□□□ -0.31
TSPAN1-209ENST00000498443 DNAJC10Q8IXB1 793 aa13.12□□□□□ -0.31
TSPAN1-209ENST00000498443 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
TSPAN1-209ENST00000498443 RUNDC1Q96C34 613 aa13.12□□□□□ -0.31
TSPAN1-209ENST00000498443 CCDC136Q96JN2 1154 aa13.12□□□□□ -0.31
TSPAN1-209ENST00000498443 CICQ96RK0 1608 aaPredicted RBP13.12□□□□□ -0.31
TSPAN1-209ENST00000498443 ADAMTS7Q9UKP4 1686 aa13.12□□□□□ -0.31
TSPAN1-209ENST00000498443 CEMIPQ8WUJ3 1361 aa13.11□□□□□ -0.31
TSPAN1-209ENST00000498443 PIP4K2AP48426 406 aaPredicted RBP13.11□□□□□ -0.31
TSPAN1-209ENST00000498443 C9orf131Q5VYM1 1079 aa13.11□□□□□ -0.31
TSPAN1-209ENST00000498443 JMYQ8N9B5 988 aa13.11□□□□□ -0.31
TSPAN1-209ENST00000498443 SMARCC1Q92922 1105 aaPredicted RBP13.11□□□□□ -0.31
TSPAN1-209ENST00000498443 ZNF496Q96IT1 587 aaPredicted RBP13.11□□□□□ -0.31
TSPAN1-209ENST00000498443 RCAN3Q9UKA8 241 aa13.11□□□□□ -0.31
TSPAN1-209ENST00000498443 MAPK8IP3Q9UPT6 1336 aa13.11□□□□□ -0.31
TSPAN1-209ENST00000498443 PXDNLA1KZ92 1463 aa13.1□□□□□ -0.31
TSPAN1-209ENST00000498443 KCPQ6ZWJ8 1503 aa13.1□□□□□ -0.31
TSPAN1-209ENST00000498443 TEFQ10587 303 aa13.1□□□□□ -0.31
TSPAN1-209ENST00000498443 RRAGCQ9HB90 399 aa13.1□□□□□ -0.31
TSPAN1-209ENST00000498443 PLEKHG2Q9H7P9 1386 aa13.09□□□□□ -0.31
TSPAN1-209ENST00000498443 BTBD11A6QL63 1104 aa13.09□□□□□ -0.31
TSPAN1-209ENST00000498443 DPEP1P16444 411 aa13.09□□□□□ -0.31
TSPAN1-209ENST00000498443 HMGB2P26583 209 aaKnown RBP13.09□□□□□ -0.31
TSPAN1-209ENST00000498443 SSFA2P28290 1259 aa13.09□□□□□ -0.31
TSPAN1-209ENST00000498443 RRP1P56182 461 aaKnown RBP13.09□□□□□ -0.31
TSPAN1-209ENST00000498443 RTF1Q92541 710 aaKnown RBP13.09□□□□□ -0.31
TSPAN1-209ENST00000498443 MRC1P22897 1456 aa13.09□□□□□ -0.31
TSPAN1-209ENST00000498443 HSPA1AP0DMV8 641 aaKnown RBP13.08□□□□□ -0.32
TSPAN1-209ENST00000498443 HSPA1BP0DMV9 641 aaKnown RBP13.08□□□□□ -0.32
TSPAN1-209ENST00000498443 FSTL1Q12841 308 aa13.08□□□□□ -0.32
TSPAN1-209ENST00000498443 KRT24Q2M2I5 525 aa13.08□□□□□ -0.32
TSPAN1-209ENST00000498443 B4GALNT3Q6L9W6 998 aa13.08□□□□□ -0.32
TSPAN1-209ENST00000498443 ANP32EQ9BTT0 268 aa13.08□□□□□ -0.32
TSPAN1-209ENST00000498443 SIPA1L3O60292 1781 aaPredicted RBP13.07□□□□□ -0.32
TSPAN1-209ENST00000498443 INTS5Q6P9B9 1019 aaKnown RBP13.07□□□□□ -0.32
TSPAN1-209ENST00000498443 ZNF790Q6PG37 636 aa13.07□□□□□ -0.32
TSPAN1-209ENST00000498443 RNF181Q9P0P0 153 aa13.07□□□□□ -0.32
TSPAN1-209ENST00000498443 LAS1LQ9Y4W2 734 aaKnown RBP13.07□□□□□ -0.32
TSPAN1-209ENST00000498443 USP16Q9Y5T5 823 aa13.07□□□□□ -0.32
TSPAN1-209ENST00000498443 KDM2BQ8NHM5 1336 aa13.07□□□□□ -0.32
TSPAN1-209ENST00000498443 PCNTO95613 3336 aa13.06□□□□□ -0.32
TSPAN1-209ENST00000498443 KIAA1551Q9HCM1 1747 aa13.06□□□□□ -0.32
TSPAN1-209ENST00000498443 NEFMP07197 916 aa13.06□□□□□ -0.32
TSPAN1-209ENST00000498443 TGFB2P61812 414 aa13.06□□□□□ -0.32
TSPAN1-209ENST00000498443 TAF7Q15545 349 aaPredicted RBP13.06□□□□□ -0.32
TSPAN1-209ENST00000498443 MYH14Q7Z406 1995 aaKnown RBP13.06□□□□□ -0.32
TSPAN1-209ENST00000498443 HTATSF1O43719 755 aaKnown RBP13.05□□□□□ -0.32
TSPAN1-209ENST00000498443 A1BGP04217 495 aa13.05□□□□□ -0.32
TSPAN1-209ENST00000498443 CYP19A1P11511 503 aaPredicted RBP13.05□□□□□ -0.32
TSPAN1-209ENST00000498443 CRKLP46109 303 aaKnown RBP13.05□□□□□ -0.32
TSPAN1-209ENST00000498443 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.05□□□□□ -0.32
TSPAN1-209ENST00000498443 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
TSPAN1-209ENST00000498443 TJP1Q07157 1748 aa13.05□□□□□ -0.32
TSPAN1-209ENST00000498443 SMC1BQ8NDV3 1235 aa13.04□□□□□ -0.32
TSPAN1-209ENST00000498443 PNNQ9H307 717 aaKnown RBP13.04□□□□□ -0.32
TSPAN1-209ENST00000498443 SRP68Q9UHB9 627 aaKnown RBP13.04□□□□□ -0.32
TSPAN1-209ENST00000498443 CANXP27824 592 aaKnown RBP13.03□□□□□ -0.32
TSPAN1-209ENST00000498443 TRAPPC3LQ5T215 181 aa13.03□□□□□ -0.32
TSPAN1-209ENST00000498443 TTC5Q8N0Z6 440 aa13.03□□□□□ -0.32
TSPAN1-209ENST00000498443 ZBTB1Q9Y2K1 713 aa13.03□□□□□ -0.32
TSPAN1-209ENST00000498443 PARP3Q9Y6F1 533 aa13.03□□□□□ -0.32
TSPAN1-209ENST00000498443 KIF13BQ9NQT8 1826 aa13.03□□□□□ -0.32
TSPAN1-209ENST00000498443 C10orf71Q711Q0 1435 aa13.03□□□□□ -0.32
TSPAN1-209ENST00000498443 EIF4A1P60842 406 aaKnown RBP13.02□□□□□ -0.33
TSPAN1-209ENST00000498443 ERICH6Q7L0X2 663 aa13.02□□□□□ -0.33
TSPAN1-209ENST00000498443 NECTIN2Q92692 538 aa13.02□□□□□ -0.33
TSPAN1-209ENST00000498443 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
TSPAN1-209ENST00000498443 SPINK5Q9NQ38 1064 aaPredicted RBP13.02□□□□□ -0.33
TSPAN1-209ENST00000498443 RTCBQ9Y3I0 505 aaKnown RBP13.02□□□□□ -0.33
TSPAN1-209ENST00000498443 HEG1Q9ULI3 1381 aa13.02□□□□□ -0.33
TSPAN1-209ENST00000498443 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
TSPAN1-209ENST00000498443 NBPF10Q6P3W6 841 aaKnown RBP13.01□□□□□ -0.33
TSPAN1-209ENST00000498443 NLGN1Q8N2Q7 840 aa13.01□□□□□ -0.33
TSPAN1-209ENST00000498443 NBPF15Q8N660 670 aa13.01□□□□□ -0.33
TSPAN1-209ENST00000498443 PIM2Q9P1W9 311 aa13.01□□□□□ -0.33
TSPAN1-209ENST00000498443 TSPYL4Q9UJ04 414 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms