RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
FAM3D-205ENST00000498347 PHKG2P15735 406 aa12.66□□□□□ -0.38
FAM3D-205ENST00000498347 VIRMAQ69YN4 1812 aaKnown RBP12.66□□□□□ -0.38
FAM3D-205ENST00000498347 ROCK2O75116 1388 aaKnown RBP12.66□□□□□ -0.38
FAM3D-205ENST00000498347 CCDC88AQ3V6T2 1871 aa12.65□□□□□ -0.38
FAM3D-205ENST00000498347 CRKLP46109 303 aaKnown RBP12.65□□□□□ -0.38
FAM3D-205ENST00000498347 CNTROBQ8N137 903 aa12.65□□□□□ -0.38
FAM3D-205ENST00000498347 GPR101Q96P66 508 aaPredicted RBP12.65□□□□□ -0.38
FAM3D-205ENST00000498347 ABT1Q9ULW3 272 aaKnown RBP12.65□□□□□ -0.38
FAM3D-205ENST00000498347 FYB1O15117 783 aa12.64□□□□□ -0.39
FAM3D-205ENST00000498347 ECE1P42892 770 aa12.64□□□□□ -0.39
FAM3D-205ENST00000498347 EAPPQ56P03 285 aaPredicted RBP12.64□□□□□ -0.39
FAM3D-205ENST00000498347 L3MBTL3Q96JM7 780 aaPredicted RBP12.64□□□□□ -0.39
FAM3D-205ENST00000498347 KDRP35968 1356 aa12.64□□□□□ -0.39
FAM3D-205ENST00000498347 C21orf2O43822 256 aa12.63□□□□□ -0.39
FAM3D-205ENST00000498347 SERPINB2P05120 415 aa12.63□□□□□ -0.39
FAM3D-205ENST00000498347 PRPF38BQ5VTL8 546 aaKnown RBP12.63□□□□□ -0.39
FAM3D-205ENST00000498347 USPL1Q5W0Q7 1092 aa12.63□□□□□ -0.39
FAM3D-205ENST00000498347 PDZRN3Q9UPQ7 1066 aa12.63□□□□□ -0.39
FAM3D-205ENST00000498347 MAP2K2P36507 400 aa12.62□□□□□ -0.39
FAM3D-205ENST00000498347 PNMA8AQ86V59 439 aaPredicted RBP12.62□□□□□ -0.39
FAM3D-205ENST00000498347 ZNF622Q969S3 477 aaKnown RBP eCLIP12.62□□□□□ -0.39
FAM3D-205ENST00000498347 CAPNS2Q96L46 248 aa12.62□□□□□ -0.39
FAM3D-205ENST00000498347 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
FAM3D-205ENST00000498347 FLT4P35916 1363 aa12.61□□□□□ -0.39
FAM3D-205ENST00000498347 KIF24Q5T7B8 1368 aa12.61□□□□□ -0.39
FAM3D-205ENST00000498347 CA12O43570 354 aa12.61□□□□□ -0.39
FAM3D-205ENST00000498347 PTCD1O75127 700 aaKnown RBP12.61□□□□□ -0.39
FAM3D-205ENST00000498347 HSP90AB1P08238 724 aaKnown RBP12.61□□□□□ -0.39
FAM3D-205ENST00000498347 DGKZQ13574 1117 aa12.61□□□□□ -0.39
FAM3D-205ENST00000498347 NFIXQ14938 502 aa12.61□□□□□ -0.39
FAM3D-205ENST00000498347 TAOK3Q9H2K8 898 aa12.61□□□□□ -0.39
FAM3D-205ENST00000498347 GGNBP2Q9H3C7 697 aa12.61□□□□□ -0.39
FAM3D-205ENST00000498347 ZNF219Q9P2Y4 722 aaPredicted RBP12.61□□□□□ -0.39
FAM3D-205ENST00000498347 HACL1Q9UJ83 578 aa12.61□□□□□ -0.39
FAM3D-205ENST00000498347 TONSLQ96HA7 1378 aa12.6□□□□□ -0.39
FAM3D-205ENST00000498347 CABP4P57796 275 aa12.6□□□□□ -0.39
FAM3D-205ENST00000498347 INTS5Q6P9B9 1019 aaKnown RBP12.6□□□□□ -0.39
FAM3D-205ENST00000498347 TSKSQ9UJT2 592 aa12.6□□□□□ -0.39
FAM3D-205ENST00000498347 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
FAM3D-205ENST00000498347 EPHX2P34913 555 aa12.59□□□□□ -0.39
FAM3D-205ENST00000498347 MAP1SQ66K74 1059 aaPredicted RBP12.59□□□□□ -0.39
FAM3D-205ENST00000498347 PAXIP1Q6ZW49 1069 aaPredicted RBP12.59□□□□□ -0.39
FAM3D-205ENST00000498347 EYA1Q99502 592 aa12.59□□□□□ -0.39
FAM3D-205ENST00000498347 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
FAM3D-205ENST00000498347 PDE6BP35913 854 aa12.58□□□□□ -0.4
FAM3D-205ENST00000498347 CYP4F22Q6NT55 531 aa12.58□□□□□ -0.4
FAM3D-205ENST00000498347 DDX21Q9NR30 783 aaKnown RBP eCLIP12.58□□□□□ -0.4
FAM3D-205ENST00000498347 ZNF831Q5JPB2 1677 aa12.57□□□□□ -0.4
FAM3D-205ENST00000498347 TNRC18O15417 2968 aaPredicted RBP12.57□□□□□ -0.4
FAM3D-205ENST00000498347 GRM1Q13255 1194 aa12.57□□□□□ -0.4
FAM3D-205ENST00000498347 SOGA3Q5TF21 947 aa12.57□□□□□ -0.4
FAM3D-205ENST00000498347 BRIP1Q9BX63 1249 aa12.57□□□□□ -0.4
FAM3D-205ENST00000498347 CARD11Q9BXL7 1154 aa12.57□□□□□ -0.4
FAM3D-205ENST00000498347 TIAM2Q8IVF5 1701 aa12.57□□□□□ -0.4
FAM3D-205ENST00000498347 DICER1Q9UPY3 1922 aaKnown RBP12.56□□□□□ -0.4
FAM3D-205ENST00000498347 PPM1GO15355 546 aaPredicted RBP12.56□□□□□ -0.4
FAM3D-205ENST00000498347 SLC24A1O60721 1099 aa12.56□□□□□ -0.4
FAM3D-205ENST00000498347 CNKSR1Q969H4 720 aa12.56□□□□□ -0.4
FAM3D-205ENST00000498347 CCER1Q8TC90 406 aaPredicted RBP12.55□□□□□ -0.4
FAM3D-205ENST00000498347 GCC1Q96CN9 775 aa12.55□□□□□ -0.4
FAM3D-205ENST00000498347 EMILIN1Q9Y6C2 1016 aa12.55□□□□□ -0.4
FAM3D-205ENST00000498347 SCN4AP35499 1836 aa12.55□□□□□ -0.4
FAM3D-205ENST00000498347 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
FAM3D-205ENST00000498347 CASP8AP2Q9UKL3 1982 aa12.54□□□□□ -0.4
FAM3D-205ENST00000498347 AOC2O75106 756 aa12.54□□□□□ -0.4
FAM3D-205ENST00000498347 NFATC2IPQ8NCF5 419 aa12.54□□□□□ -0.4
FAM3D-205ENST00000498347 BCL2L12Q9HB09 334 aa12.54□□□□□ -0.4
FAM3D-205ENST00000498347 WASHC2AQ641Q2 1341 aa12.54□□□□□ -0.4
FAM3D-205ENST00000498347 ST20-MTHFSA0A0A6YYL1 179 aa12.53□□□□□ -0.4
FAM3D-205ENST00000498347 MTHFSP49914 203 aa12.53□□□□□ -0.4
FAM3D-205ENST00000498347 SOX10P56693 466 aa12.53□□□□□ -0.4
FAM3D-205ENST00000498347 PLEKHO1Q53GL0 409 aaPredicted RBP12.53□□□□□ -0.4
FAM3D-205ENST00000498347 CST9Q5W186 159 aa12.53□□□□□ -0.4
FAM3D-205ENST00000498347 TLL2Q9Y6L7 1015 aa12.53□□□□□ -0.4
FAM3D-205ENST00000498347 SOS1Q07889 1333 aaPredicted RBP12.53□□□□□ -0.4
FAM3D-205ENST00000498347 COL5A3P25940 1745 aaPredicted RBP12.52□□□□□ -0.41
FAM3D-205ENST00000498347 BRPF1P55201 1214 aaPredicted RBP12.52□□□□□ -0.41
FAM3D-205ENST00000498347 STYK1Q6J9G0 422 aa12.52□□□□□ -0.41
FAM3D-205ENST00000498347 BICDL1Q6ZP65 573 aa12.52□□□□□ -0.41
FAM3D-205ENST00000498347 FER1L6Q2WGJ9 1857 aa12.51□□□□□ -0.41
FAM3D-205ENST00000498347 DNAJC10Q8IXB1 793 aa12.51□□□□□ -0.41
FAM3D-205ENST00000498347 CYP19A1P11511 503 aaPredicted RBP12.5□□□□□ -0.41
FAM3D-205ENST00000498347 FMR1Q06787 632 aaKnown RBP eCLIP12.5□□□□□ -0.41
FAM3D-205ENST00000498347 AMOTQ4VCS5 1084 aa12.5□□□□□ -0.41
FAM3D-205ENST00000498347 GPC2Q8N158 579 aa12.5□□□□□ -0.41
FAM3D-205ENST00000498347 AFDNP55196 1824 aaKnown RBP12.5□□□□□ -0.41
FAM3D-205ENST00000498347 RNF123Q5XPI4 1314 aa12.49□□□□□ -0.41
FAM3D-205ENST00000498347 ZNF541Q9H0D2 1346 aa12.49□□□□□ -0.41
FAM3D-205ENST00000498347 FZD9O00144 591 aa12.49□□□□□ -0.41
FAM3D-205ENST00000498347 SRGNP10124 158 aa12.49□□□□□ -0.41
FAM3D-205ENST00000498347 PRPF40BQ6NWY9 871 aaKnown RBP12.49□□□□□ -0.41
FAM3D-205ENST00000498347 C7orf43Q8WVR3 580 aa12.49□□□□□ -0.41
FAM3D-205ENST00000498347 MASTLQ96GX5 879 aa12.49□□□□□ -0.41
FAM3D-205ENST00000498347 HHIPL1Q96JK4 782 aa12.49□□□□□ -0.41
FAM3D-205ENST00000498347 SIN3AQ96ST3 1273 aa12.49□□□□□ -0.41
FAM3D-205ENST00000498347 DLEC1Q9Y238 1755 aa12.48□□□□□ -0.41
FAM3D-205ENST00000498347 CARMIL3Q8ND23 1372 aa12.48□□□□□ -0.41
FAM3D-205ENST00000498347 FKBP4Q02790 459 aaKnown RBP eCLIP12.48□□□□□ -0.41
FAM3D-205ENST00000498347 NEUROD1Q13562 356 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms