RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 GOLGA6L9A6NEM1 432 aa17.58■□□□□ 0.41
C4A-259ENST00000498271 F6X3S4 739 aa17.58■□□□□ 0.41
C4A-259ENST00000498271 FBLN1P23142 703 aa17.58■□□□□ 0.41
C4A-259ENST00000498271 JAKMIP3Q5VZ66 844 aa17.58■□□□□ 0.4
C4A-259ENST00000498271 CWC27Q6UX04 472 aaKnown RBP17.58■□□□□ 0.4
C4A-259ENST00000498271 NUTM1Q86Y26 1132 aa17.58■□□□□ 0.4
C4A-259ENST00000498271 AMOTL2Q9Y2J4 779 aa17.58■□□□□ 0.4
C4A-259ENST00000498271 CASQ1P31415 396 aa17.58■□□□□ 0.4
C4A-259ENST00000498271 KCNH5Q8NCM2 988 aa17.58■□□□□ 0.4
C4A-259ENST00000498271 PPP1R1BQ9UD71 204 aaPredicted RBP17.58■□□□□ 0.4
C4A-259ENST00000498271 PCDHB15Q9Y5E8 787 aa17.58■□□□□ 0.4
C4A-259ENST00000498271 CDKL5O76039 1030 aa17.57■□□□□ 0.4
C4A-259ENST00000498271 CARD14Q9BXL6 1004 aa17.57■□□□□ 0.4
C4A-259ENST00000498271 DDX19AQ9NUU7 478 aaKnown RBP17.57■□□□□ 0.4
C4A-259ENST00000498271 GCC2Q8IWJ2 1684 aa17.57■□□□□ 0.4
C4A-259ENST00000498271 TAF7Q15545 349 aaPredicted RBP17.57■□□□□ 0.4
C4A-259ENST00000498271 FAM83GA6ND36 823 aa17.57■□□□□ 0.4
C4A-259ENST00000498271 USP25Q9UHP3 1055 aa17.57■□□□□ 0.4
C4A-259ENST00000498271 BAG4O95429 457 aaKnown RBP17.57■□□□□ 0.4
C4A-259ENST00000498271 KIF5CO60282 957 aa17.56■□□□□ 0.4
C4A-259ENST00000498271 PTPRCP08575 1304 aa17.56■□□□□ 0.4
C4A-259ENST00000498271 CCDC94Q9BW85 323 aaPredicted RBP17.56■□□□□ 0.4
C4A-259ENST00000498271 LRSAM1Q6UWE0 723 aa17.56■□□□□ 0.4
C4A-259ENST00000498271 KIF6Q6ZMV9 814 aa17.56■□□□□ 0.4
C4A-259ENST00000498271 CCDC171Q6TFL3 1326 aa17.56■□□□□ 0.4
C4A-259ENST00000498271 BMP2KLQ5H9B9 411 aa17.56■□□□□ 0.4
C4A-259ENST00000498271 CCAR1Q8IX12 1150 aaKnown RBP17.56■□□□□ 0.4
C4A-259ENST00000498271 TBC1D2BQ9UPU7 963 aa17.56■□□□□ 0.4
C4A-259ENST00000498271 ADCY5O95622 1261 aa17.55■□□□□ 0.4
C4A-259ENST00000498271 CFAP100Q494V2 611 aa17.55■□□□□ 0.4
C4A-259ENST00000498271 TRIM22Q8IYM9 498 aa17.55■□□□□ 0.4
C4A-259ENST00000498271 JAKMIP1Q96N16 626 aaKnown RBP17.55■□□□□ 0.4
C4A-259ENST00000498271 TTC21BQ7Z4L5 1316 aa17.55■□□□□ 0.4
C4A-259ENST00000498271 URI1O94763 535 aaPredicted RBP17.55■□□□□ 0.4
C4A-259ENST00000498271 TUBB4AP04350 444 aa17.55■□□□□ 0.4
C4A-259ENST00000498271 HDAC1Q13547 482 aaPredicted RBP17.55■□□□□ 0.4
C4A-259ENST00000498271 CCDC83Q8IWF9 413 aa17.55■□□□□ 0.4
C4A-259ENST00000498271 SMAP1Q8IYB5 467 aaPredicted RBP17.55■□□□□ 0.4
C4A-259ENST00000498271 USHBP1Q8N6Y0 703 aa17.55■□□□□ 0.4
C4A-259ENST00000498271 KIF1BPQ96EK5 621 aa17.55■□□□□ 0.4
C4A-259ENST00000498271 GTF2F1P35269 517 aaKnown RBP eCLIP17.55■□□□□ 0.4
C4A-259ENST00000498271 CENPHQ9H3R5 247 aa17.55■□□□□ 0.4
C4A-259ENST00000498271 STRN4Q9NRL3 753 aa17.55■□□□□ 0.4
C4A-259ENST00000498271 ANKRD18AQ8IVF6 992 aa17.55■□□□□ 0.4
C4A-259ENST00000498271 ZKSCAN5Q9Y2L8 839 aa17.55■□□□□ 0.4
C4A-259ENST00000498271 RBM42Q9BTD8 480 aaKnown RBP17.54■□□□□ 0.4
C4A-259ENST00000498271 PRDM11Q9NQV5 511 aa17.54■□□□□ 0.4
C4A-259ENST00000498271 FAM193AP78312 1265 aa17.54■□□□□ 0.4
C4A-259ENST00000498271 STK3Q13188 491 aa17.54■□□□□ 0.4
C4A-259ENST00000498271 TOM1L2Q6ZVM7 507 aa17.53■□□□□ 0.4
C4A-259ENST00000498271 RAB11FIP3O75154 756 aa17.53■□□□□ 0.4
C4A-259ENST00000498271 IVLP07476 585 aa17.53■□□□□ 0.4
C4A-259ENST00000498271 CCDC158Q5M9N0 1113 aa17.53■□□□□ 0.4
C4A-259ENST00000498271 IMMTQ16891 758 aaKnown RBP17.53■□□□□ 0.4
C4A-259ENST00000498271 ZSCAN23Q3MJ62 389 aa17.53■□□□□ 0.4
C4A-259ENST00000498271 ZC3H6P61129 1189 aaKnown RBP17.53■□□□□ 0.4
C4A-259ENST00000498271 DYDC1Q8WWB3 177 aa17.53■□□□□ 0.4
C4A-259ENST00000498271 C16orf45Q96MC5 204 aaPredicted RBP17.53■□□□□ 0.4
C4A-259ENST00000498271 ACEP12821 1306 aa17.53■□□□□ 0.4
C4A-259ENST00000498271 ABCC2Q92887 1545 aa17.52■□□□□ 0.4
C4A-259ENST00000498271 TBC1D9Q6ZT07 1266 aa17.52■□□□□ 0.4
C4A-259ENST00000498271 PUS7Q96PZ0 661 aaKnown RBP17.52■□□□□ 0.4
C4A-259ENST00000498271 TTC39AQ5SRH9 613 aa17.52■□□□□ 0.4
C4A-259ENST00000498271 ABCC10Q5T3U5 1492 aa17.52■□□□□ 0.4
C4A-259ENST00000498271 C8orf34Q49A92 452 aa17.52■□□□□ 0.4
C4A-259ENST00000498271 ARHGAP45Q92619 1136 aa17.52■□□□□ 0.4
C4A-259ENST00000498271 MAST1Q9Y2H9 1570 aa17.52■□□□□ 0.39
C4A-259ENST00000498271 NOL7Q9UMY1 257 aaKnown RBP17.52■□□□□ 0.39
C4A-259ENST00000498271 LRRFIP2Q9Y608 721 aaKnown RBP17.52■□□□□ 0.39
C4A-259ENST00000498271 CEBPAP49715 358 aaPredicted RBP17.51■□□□□ 0.39
C4A-259ENST00000498271 FLIIQ13045 1269 aa17.51■□□□□ 0.39
C4A-259ENST00000498271 NOLC1Q14978 699 aaKnown RBP eCLIP17.51■□□□□ 0.392e-7■■□□□ 13.7
C4A-259ENST00000498271 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
C4A-259ENST00000498271 CDK5RAP3Q96JB5 506 aa17.51■□□□□ 0.39
C4A-259ENST00000498271 POLR3GO15318 223 aaPredicted RBP17.51■□□□□ 0.39
C4A-259ENST00000498271 CEP135Q66GS9 1140 aa17.51■□□□□ 0.39
C4A-259ENST00000498271 CCDC43Q96MW1 224 aaKnown RBP17.51■□□□□ 0.39
C4A-259ENST00000498271 NUCB1Q02818 461 aa17.51■□□□□ 0.39
C4A-259ENST00000498271 CTR9Q6PD62 1173 aa17.51■□□□□ 0.39
C4A-259ENST00000498271 CTNNA3Q9UI47 895 aa17.51■□□□□ 0.39
C4A-259ENST00000498271 PHF8Q9UPP1 1060 aa17.51■□□□□ 0.39
C4A-259ENST00000498271 KIAA1328Q86T90 577 aa17.5■□□□□ 0.39
C4A-259ENST00000498271 GLRX3O76003 335 aaKnown RBP17.5■□□□□ 0.39
C4A-259ENST00000498271 TOP1P11387 765 aaKnown RBP17.5■□□□□ 0.39
C4A-259ENST00000498271 MAPK8IP2Q13387 824 aaPredicted RBP17.5■□□□□ 0.39
C4A-259ENST00000498271 CCDC150Q8NCX0 1101 aa17.5■□□□□ 0.39
C4A-259ENST00000498271 WASF1Q92558 559 aa17.5■□□□□ 0.39
C4A-259ENST00000498271 FAM177BA6PVY3 158 aa17.5■□□□□ 0.39
C4A-259ENST00000498271 RBM25P49756 843 aaKnown RBP17.5■□□□□ 0.39
C4A-259ENST00000498271 TNNQ9UQP3 1299 aa17.5■□□□□ 0.39
C4A-259ENST00000498271 UBE2HP62256 183 aa17.49■□□□□ 0.39
C4A-259ENST00000498271 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.49■□□□□ 0.39
C4A-259ENST00000498271 CNNM1Q9NRU3 951 aa17.49■□□□□ 0.39
C4A-259ENST00000498271 SEPT7Q16181 437 aaKnown RBP17.49■□□□□ 0.39
C4A-259ENST00000498271 CAMK4Q16566 473 aa17.49■□□□□ 0.39
C4A-259ENST00000498271 KIF4BQ2VIQ3 1234 aa17.49■□□□□ 0.39
C4A-259ENST00000498271 TAF4BQ92750 862 aa17.49■□□□□ 0.39
C4A-259ENST00000498271 SMARCC1Q92922 1105 aaPredicted RBP17.49■□□□□ 0.39
C4A-259ENST00000498271 FEZ1Q99689 392 aa17.49■□□□□ 0.39
C4A-259ENST00000498271 CASTP20810 708 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms