RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CANXP27824 592 aaKnown RBP20.27■□□□□ 0.84
NUP50-219ENST00000497960 NFE2L2Q16236 605 aa20.27■□□□□ 0.84
NUP50-219ENST00000497960 KCNQ3O43525 872 aa20.26■□□□□ 0.83
NUP50-219ENST00000497960 SIPA1L3O60292 1781 aaPredicted RBP20.26■□□□□ 0.83
NUP50-219ENST00000497960 COL15A1P39059 1388 aa20.25■□□□□ 0.83
NUP50-219ENST00000497960 GRIN3BO60391 1043 aa20.25■□□□□ 0.83
NUP50-219ENST00000497960 FKBP8Q14318 412 aa20.25■□□□□ 0.83
NUP50-219ENST00000497960 TAF7Q15545 349 aaPredicted RBP20.25■□□□□ 0.83
NUP50-219ENST00000497960 A0A087WZG4 1122 aa20.24■□□□□ 0.83
NUP50-219ENST00000497960 USPL1Q5W0Q7 1092 aa20.24■□□□□ 0.83
NUP50-219ENST00000497960 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
NUP50-219ENST00000497960 NARFQ9UHQ1 456 aa20.24■□□□□ 0.83
NUP50-219ENST00000497960 C4AP0C0L4 1744 aa20.24■□□□□ 0.83
NUP50-219ENST00000497960 NPM2Q86SE8 214 aaKnown RBP20.23■□□□□ 0.83
NUP50-219ENST00000497960 ANP32CO43423 234 aa20.22■□□□□ 0.83
NUP50-219ENST00000497960 SNRPA1P09661 255 aaKnown RBP20.22■□□□□ 0.83
NUP50-219ENST00000497960 YBX3P16989 372 aaKnown RBP eCLIP20.22■□□□□ 0.83
NUP50-219ENST00000497960 EIF5P55010 431 aaKnown RBP20.22■□□□□ 0.83
NUP50-219ENST00000497960 WDR43Q15061 677 aaKnown RBP eCLIP20.22■□□□□ 0.83
NUP50-219ENST00000497960 PNISRQ8TF01 805 aaKnown RBP20.22■□□□□ 0.83
NUP50-219ENST00000497960 ZNF330Q9Y3S2 320 aaPredicted RBP20.21■□□□□ 0.83
NUP50-219ENST00000497960 A1BGP04217 495 aa20.2■□□□□ 0.82
NUP50-219ENST00000497960 IL6STP40189 918 aaPredicted RBP20.2■□□□□ 0.82
NUP50-219ENST00000497960 TGFB2P61812 414 aa20.2■□□□□ 0.82
NUP50-219ENST00000497960 TM4SF1P30408 202 aa20.19■□□□□ 0.82
NUP50-219ENST00000497960 RIPK4P57078 832 aa20.19■□□□□ 0.82
NUP50-219ENST00000497960 DDR1Q08345 913 aa20.19■□□□□ 0.82
NUP50-219ENST00000497960 MIS18AQ9NYP9 233 aa20.19■□□□□ 0.82
NUP50-219ENST00000497960 USP16Q9Y5T5 823 aa20.19■□□□□ 0.82
NUP50-219ENST00000497960 C10orf71Q711Q0 1435 aa20.19■□□□□ 0.82
NUP50-219ENST00000497960 CHD4Q14839 1912 aa20.18■□□□□ 0.82
NUP50-219ENST00000497960 THUMPD2Q9BTF0 503 aaKnown RBP20.18■□□□□ 0.82
NUP50-219ENST00000497960 WWC3Q9ULE0 1092 aa20.18■□□□□ 0.82
NUP50-219ENST00000497960 POLRMTO00411 1230 aaKnown RBP20.17■□□□□ 0.82
NUP50-219ENST00000497960 LMOD3Q0VAK6 560 aa20.17■□□□□ 0.82
NUP50-219ENST00000497960 DLG5Q8TDM6 1919 aa20.17■□□□□ 0.82
NUP50-219ENST00000497960 PRAMEF22A3QJZ6 481 aa20.16■□□□□ 0.82
NUP50-219ENST00000497960 TMPOP42166 694 aaKnown RBP20.16■□□□□ 0.82
NUP50-219ENST00000497960 NFIXQ14938 502 aa20.16■□□□□ 0.82
NUP50-219ENST00000497960 CCDC146Q8IYE0 955 aa20.16■□□□□ 0.82
NUP50-219ENST00000497960 TBC1D2BQ9UPU7 963 aa20.16■□□□□ 0.82
NUP50-219ENST00000497960 A0A0G2JLW4 131 aa20.15■□□□□ 0.82
NUP50-219ENST00000497960 RUNDC1Q96C34 613 aa20.15■□□□□ 0.82
NUP50-219ENST00000497960 BCL2L12Q9HB09 334 aa20.15■□□□□ 0.82
NUP50-219ENST00000497960 PXDNLA1KZ92 1463 aa20.15■□□□□ 0.82
NUP50-219ENST00000497960 DPEP1P16444 411 aa20.14■□□□□ 0.81
NUP50-219ENST00000497960 ADAMTS8Q9UP79 889 aa20.14■□□□□ 0.81
NUP50-219ENST00000497960 KIF13BQ9NQT8 1826 aa20.13■□□□□ 0.81
NUP50-219ENST00000497960 NEUROD2Q15784 382 aa20.13■□□□□ 0.81
NUP50-219ENST00000497960 DIEXFQ68CQ4 756 aaKnown RBP20.13■□□□□ 0.81
NUP50-219ENST00000497960 BICDL1Q6ZP65 573 aa20.13■□□□□ 0.81
NUP50-219ENST00000497960 UTRNP46939 3433 aa20.13■□□□□ 0.81
NUP50-219ENST00000497960 SERPINB2P05120 415 aa20.12■□□□□ 0.81
NUP50-219ENST00000497960 PIP4K2AP48426 406 aaPredicted RBP20.12■□□□□ 0.81
NUP50-219ENST00000497960 EIF4A1P60842 406 aaKnown RBP20.12■□□□□ 0.81
NUP50-219ENST00000497960 DZIP3Q86Y13 1208 aaKnown RBP20.12■□□□□ 0.81
NUP50-219ENST00000497960 BCS1LQ9Y276 419 aa20.12■□□□□ 0.81
NUP50-219ENST00000497960 RRP7AQ9Y3A4 280 aaKnown RBP20.12■□□□□ 0.81
NUP50-219ENST00000497960 ZNF784Q8NCA9 323 aaPredicted RBP20.11■□□□□ 0.81
NUP50-219ENST00000497960 TSPYL4Q9UJ04 414 aa20.11■□□□□ 0.81
NUP50-219ENST00000497960 GIGYF1O75420 1035 aaPredicted RBP20.1■□□□□ 0.81
NUP50-219ENST00000497960 CAMTA2O94983 1202 aa20.1■□□□□ 0.81
NUP50-219ENST00000497960 TBC1D9BQ66K14 1250 aa20.1■□□□□ 0.81
NUP50-219ENST00000497960 BABAM1Q9NWV8 329 aa20.1■□□□□ 0.81
NUP50-219ENST00000497960 PIM2Q9P1W9 311 aa20.09■□□□□ 0.81
NUP50-219ENST00000497960 GOLGB1Q14789 3259 aaKnown RBP20.08■□□□□ 0.81
NUP50-219ENST00000497960 NBPF26B4DH59 902 aa20.08■□□□□ 0.81
NUP50-219ENST00000497960 NBPF10Q6P3W6 841 aaKnown RBP20.08■□□□□ 0.81
NUP50-219ENST00000497960 NBPF15Q8N660 670 aa20.08■□□□□ 0.81
NUP50-219ENST00000497960 SETDB2Q96T68 719 aa20.08■□□□□ 0.81
NUP50-219ENST00000497960 ZNF652Q9Y2D9 606 aa20.08■□□□□ 0.81
NUP50-219ENST00000497960 N4BP2Q86UW6 1770 aaPredicted RBP20.08■□□□□ 0.8
NUP50-219ENST00000497960 KCNA3P22001 575 aa20.07■□□□□ 0.8
NUP50-219ENST00000497960 KDM3BQ7LBC6 1761 aa20.07■□□□□ 0.8
NUP50-219ENST00000497960 CHRNA5P30532 468 aa20.06■□□□□ 0.8
NUP50-219ENST00000497960 DALRD3Q5D0E6 543 aaKnown RBP20.06■□□□□ 0.8
NUP50-219ENST00000497960 CLEC4GQ6UXB4 293 aa20.06■□□□□ 0.8
NUP50-219ENST00000497960 CARMIL3Q8ND23 1372 aa20.06■□□□□ 0.8
NUP50-219ENST00000497960 KIAA1551Q9HCM1 1747 aa20.05■□□□□ 0.8
NUP50-219ENST00000497960 NPHP1O15259 732 aa20.05■□□□□ 0.8
NUP50-219ENST00000497960 SCN7AQ01118 1682 aa20.04■□□□□ 0.8
NUP50-219ENST00000497960 TRIM35Q9UPQ4 493 aa20.04■□□□□ 0.8
NUP50-219ENST00000497960 RGL2O15211 777 aa20.03■□□□□ 0.8
NUP50-219ENST00000497960 ARHGAP27Q6ZUM4 889 aa20.03■□□□□ 0.8
NUP50-219ENST00000497960 NGEFQ8N5V2 710 aa20.03■□□□□ 0.8
NUP50-219ENST00000497960 LAS1LQ9Y4W2 734 aaKnown RBP20.03■□□□□ 0.8
NUP50-219ENST00000497960 AFDNP55196 1824 aaKnown RBP20.03■□□□□ 0.8
NUP50-219ENST00000497960 NRXN2Q9P2S2 1712 aa20.02■□□□□ 0.8
NUP50-219ENST00000497960 H0YIN7 160 aa20.02■□□□□ 0.8
NUP50-219ENST00000497960 C2CD5Q86YS7 1000 aa20.02■□□□□ 0.8
NUP50-219ENST00000497960 CNBD1Q8NA66 436 aa20.02■□□□□ 0.8
NUP50-219ENST00000497960 ERBB4Q15303 1308 aa20.02■□□□□ 0.79
NUP50-219ENST00000497960 LAMB4A4D0S4 1761 aa20.01■□□□□ 0.79
NUP50-219ENST00000497960 CHL1O00533 1208 aa20.01■□□□□ 0.79
NUP50-219ENST00000497960 APAF1O14727 1248 aa20.01■□□□□ 0.79
NUP50-219ENST00000497960 MYL6BP14649 208 aa20.01■□□□□ 0.79
NUP50-219ENST00000497960 ST5P78524 1137 aa20.01■□□□□ 0.79
NUP50-219ENST00000497960 PRR5LQ6MZQ0 368 aa20.01■□□□□ 0.79
NUP50-219ENST00000497960 BRIP1Q9BX63 1249 aa20.01■□□□□ 0.79
NUP50-219ENST00000497960 MRS2Q9HD23 443 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms