RNA–Protein interactions for RNA: ENST00000497845.1

POLR2B-211, Transcript of RNA polymerase II subunit B, humanhuman

TSL 4

Gene POLR2B, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-211ENST00000497845 SMIM5Q71RC9 77 aa8.85□□□□□ -0.99
POLR2B-211ENST00000497845 FBXO22Q8NEZ5 403 aa8.85□□□□□ -0.99
POLR2B-211ENST00000497845 MCOLN1Q9GZU1 580 aa8.85□□□□□ -0.99
POLR2B-211ENST00000497845 CCNL1Q9UK58 526 aaPredicted RBP8.85□□□□□ -0.99
POLR2B-211ENST00000497845 MINK1Q8N4C8 1332 aaPredicted RBP8.84□□□□□ -0.99
POLR2B-211ENST00000497845 A0A0G2JLW4 131 aa8.84□□□□□ -0.99
POLR2B-211ENST00000497845 NLRP13Q86W25 1043 aa8.84□□□□□ -0.99
POLR2B-211ENST00000497845 PIK3C2AO00443 1686 aa8.84□□□□□ -0.99
POLR2B-211ENST00000497845 PKD1L3Q7Z443 1732 aa8.83□□□□□ -1
POLR2B-211ENST00000497845 WASLO00401 505 aaPredicted RBP8.83□□□□□ -1
POLR2B-211ENST00000497845 VASPP50552 380 aaPredicted RBP8.83□□□□□ -1
POLR2B-211ENST00000497845 ZBED2Q9BTP6 218 aa8.83□□□□□ -1
POLR2B-211ENST00000497845 ABCC6O95255 1503 aa8.83□□□□□ -1
POLR2B-211ENST00000497845 PIK3C2GO75747 1445 aa8.82□□□□□ -1
POLR2B-211ENST00000497845 PPIP5K1Q6PFW1 1433 aa8.82□□□□□ -1
POLR2B-211ENST00000497845 SOX10P56693 466 aa8.82□□□□□ -1
POLR2B-211ENST00000497845 FLAD1Q8NFF5 587 aa8.82□□□□□ -1
POLR2B-211ENST00000497845 SYTL4Q96C24 671 aaPredicted RBP8.82□□□□□ -1
POLR2B-211ENST00000497845 GCC1Q96CN9 775 aa8.82□□□□□ -1
POLR2B-211ENST00000497845 NBPF3Q9H094 633 aa8.82□□□□□ -1
POLR2B-211ENST00000497845 MAP2K1Q02750 393 aaPredicted RBP8.81□□□□□ -1
POLR2B-211ENST00000497845 RGL3Q3MIN7 710 aa8.81□□□□□ -1
POLR2B-211ENST00000497845 HABP4Q5JVS0 413 aaKnown RBP8.81□□□□□ -1
POLR2B-211ENST00000497845 STK17AQ9UEE5 414 aa8.81□□□□□ -1
POLR2B-211ENST00000497845 CCDC7Q96M83 1385 aa8.81□□□□□ -1
POLR2B-211ENST00000497845 ACEP12821 1306 aa8.8□□□□□ -1
POLR2B-211ENST00000497845 DPEP1P16444 411 aa8.8□□□□□ -1
POLR2B-211ENST00000497845 TGFB2P61812 414 aa8.8□□□□□ -1
POLR2B-211ENST00000497845 NUDT16Q96DE0 195 aaKnown RBP8.8□□□□□ -1
POLR2B-211ENST00000497845 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
POLR2B-211ENST00000497845 PDZRN3Q9UPQ7 1066 aa8.8□□□□□ -1
POLR2B-211ENST00000497845 ROCK1Q13464 1354 aa8.8□□□□□ -1
POLR2B-211ENST00000497845 COL18A1P39060 1754 aa8.8□□□□□ -1
POLR2B-211ENST00000497845 A0A0C4DFX4 3053 aa8.79□□□□□ -1
POLR2B-211ENST00000497845 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.79□□□□□ -1
POLR2B-211ENST00000497845 GLTPD2A6NH11 291 aa8.79□□□□□ -1
POLR2B-211ENST00000497845 POTECB2RU33 542 aa8.79□□□□□ -1
POLR2B-211ENST00000497845 PRIM1P49642 420 aaKnown RBP8.79□□□□□ -1
POLR2B-211ENST00000497845 BCAMP50895 628 aa8.79□□□□□ -1
POLR2B-211ENST00000497845 ANKK1Q8NFD2 765 aa8.79□□□□□ -1
POLR2B-211ENST00000497845 ZFP91Q96JP5 570 aaPredicted RBP8.79□□□□□ -1
POLR2B-211ENST00000497845 C14orf93Q9H972 538 aaKnown RBP8.79□□□□□ -1
POLR2B-211ENST00000497845 POLR3AO14802 1390 aaPredicted RBP8.78□□□□□ -1
POLR2B-211ENST00000497845 PHF14O94880 888 aa8.78□□□□□ -1
POLR2B-211ENST00000497845 CFAP70Q5T0N1 1121 aa8.78□□□□□ -1
POLR2B-211ENST00000497845 NYAP1Q6ZVC0 841 aa8.78□□□□□ -1
POLR2B-211ENST00000497845 AMIGO3Q86WK7 504 aa8.78□□□□□ -1
POLR2B-211ENST00000497845 TSKSQ9UJT2 592 aa8.78□□□□□ -1
POLR2B-211ENST00000497845 SPATA31E1Q6ZUB1 1445 aa8.78□□□□□ -1
POLR2B-211ENST00000497845 DGKZQ13574 1117 aa8.77□□□□□ -1.01
POLR2B-211ENST00000497845 SPOCK2Q92563 424 aa8.77□□□□□ -1.01
POLR2B-211ENST00000497845 QRICH2Q9H0J4 1663 aa8.77□□□□□ -1.01
POLR2B-211ENST00000497845 KIAA1551Q9HCM1 1747 aa8.77□□□□□ -1.01
POLR2B-211ENST00000497845 N4BP2Q86UW6 1770 aaPredicted RBP8.76□□□□□ -1.01
POLR2B-211ENST00000497845 NSD2O96028 1365 aa8.76□□□□□ -1.01
POLR2B-211ENST00000497845 TMEM88BA6NKF7 163 aa8.76□□□□□ -1.01
POLR2B-211ENST00000497845 IL2RBP14784 551 aa8.76□□□□□ -1.01
POLR2B-211ENST00000497845 DDX54Q8TDD1 881 aaKnown RBP8.76□□□□□ -1.01
POLR2B-211ENST00000497845 DCAF5Q96JK2 942 aa8.76□□□□□ -1.01
POLR2B-211ENST00000497845 BEGAINQ9BUH8 593 aa8.76□□□□□ -1.01
POLR2B-211ENST00000497845 TRAK1Q9UPV9 953 aa8.76□□□□□ -1.01
POLR2B-211ENST00000497845 V9GY48 417 aaPredicted RBP8.76□□□□□ -1.01
POLR2B-211ENST00000497845 WDR33Q9C0J8 1336 aaKnown RBP8.76□□□□□ -1.01
POLR2B-211ENST00000497845 ZC3H4Q9UPT8 1303 aaKnown RBP8.76□□□□□ -1.01
POLR2B-211ENST00000497845 VIRMAQ69YN4 1812 aaKnown RBP8.75□□□□□ -1.01
POLR2B-211ENST00000497845 USP54Q70EL1 1684 aa8.75□□□□□ -1.01
POLR2B-211ENST00000497845 LY75O60449 1722 aa8.75□□□□□ -1.01
POLR2B-211ENST00000497845 CPSF1Q10570 1443 aaKnown RBP8.75□□□□□ -1.01
POLR2B-211ENST00000497845 MMP10P09238 476 aa8.75□□□□□ -1.01
POLR2B-211ENST00000497845 DEFB115Q30KQ5 88 aa8.75□□□□□ -1.01
POLR2B-211ENST00000497845 AK7Q96M32 723 aa8.75□□□□□ -1.01
POLR2B-211ENST00000497845 PASKQ96RG2 1323 aa8.75□□□□□ -1.01
POLR2B-211ENST00000497845 PITPNM2Q9BZ72 1349 aa8.75□□□□□ -1.01
POLR2B-211ENST00000497845 ANKRD36BQ8N2N9 1353 aa8.74□□□□□ -1.01
POLR2B-211ENST00000497845 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.74□□□□□ -1.01
POLR2B-211ENST00000497845 RASSF10A6NK89 507 aa8.74□□□□□ -1.01
POLR2B-211ENST00000497845 KCNA3P22001 575 aa8.74□□□□□ -1.01
POLR2B-211ENST00000497845 PTPREP23469 700 aa8.74□□□□□ -1.01
POLR2B-211ENST00000497845 FXR1P51114 621 aaKnown RBP eCLIP8.74□□□□□ -1.01
POLR2B-211ENST00000497845 RASSF7Q02833 373 aa8.74□□□□□ -1.01
POLR2B-211ENST00000497845 FKBP8Q14318 412 aa8.74□□□□□ -1.01
POLR2B-211ENST00000497845 DALRD3Q5D0E6 543 aaKnown RBP8.74□□□□□ -1.01
POLR2B-211ENST00000497845 ARHGEF25Q86VW2 580 aa8.74□□□□□ -1.01
POLR2B-211ENST00000497845 SLC17A8Q8NDX2 589 aa8.74□□□□□ -1.01
POLR2B-211ENST00000497845 SLIT3O75094 1523 aa8.74□□□□□ -1.01
POLR2B-211ENST00000497845 USP47Q96K76 1375 aa8.73□□□□□ -1.01
POLR2B-211ENST00000497845 NBPF15Q8N660 670 aa8.73□□□□□ -1.01
POLR2B-211ENST00000497845 ZNF454Q8N9F8 522 aa8.73□□□□□ -1.01
POLR2B-211ENST00000497845 NLRP2Q9NX02 1062 aa8.73□□□□□ -1.01
POLR2B-211ENST00000497845 PIM2Q9P1W9 311 aa8.73□□□□□ -1.01
POLR2B-211ENST00000497845 ITSN1Q15811 1721 aa8.73□□□□□ -1.01
POLR2B-211ENST00000497845 PLEKHG3A1L390 1219 aa8.72□□□□□ -1.01
POLR2B-211ENST00000497845 SOWAHBA6NEL2 793 aa8.72□□□□□ -1.01
POLR2B-211ENST00000497845 TBC1D12O60347 775 aa8.72□□□□□ -1.01
POLR2B-211ENST00000497845 LMNB1P20700 586 aa8.71□□□□□ -1.02
POLR2B-211ENST00000497845 KAT6BQ8WYB5 2073 aa8.71□□□□□ -1.02
POLR2B-211ENST00000497845 KDM6AO15550 1401 aaPredicted RBP8.71□□□□□ -1.02
POLR2B-211ENST00000497845 C5P01031 1676 aa8.7□□□□□ -1.02
POLR2B-211ENST00000497845 RIOK3O14730 519 aaKnown RBP8.7□□□□□ -1.02
POLR2B-211ENST00000497845 ITGAEP38570 1179 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms