RNA–Protein interactions for RNA: ENST00000497739.1

PTPN3-206, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 3

Gene PTPN3, Length 781 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-206ENST00000497739 GPBP1L1Q9HC44 474 aaPredicted RBP12.96□□□□□ -0.33
PTPN3-206ENST00000497739 PALLDQ8WX93 1383 aa12.95□□□□□ -0.34
PTPN3-206ENST00000497739 KIF7Q2M1P5 1343 aa12.95□□□□□ -0.34
PTPN3-206ENST00000497739 KAT6BQ8WYB5 2073 aa12.95□□□□□ -0.34
PTPN3-206ENST00000497739 C4BP0C0L5 1744 aa12.94□□□□□ -0.34
PTPN3-206ENST00000497739 RRS1Q15050 365 aaKnown RBP12.94□□□□□ -0.34
PTPN3-206ENST00000497739 MICALL2Q8IY33 904 aa12.94□□□□□ -0.34
PTPN3-206ENST00000497739 USHBP1Q8N6Y0 703 aa12.94□□□□□ -0.34
PTPN3-206ENST00000497739 L3MBTL3Q96JM7 780 aaPredicted RBP12.94□□□□□ -0.34
PTPN3-206ENST00000497739 CARD14Q9BXL6 1004 aa12.94□□□□□ -0.34
PTPN3-206ENST00000497739 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
PTPN3-206ENST00000497739 TAF1LQ8IZX4 1826 aa12.94□□□□□ -0.34
PTPN3-206ENST00000497739 FLT4P35916 1363 aa12.94□□□□□ -0.34
PTPN3-206ENST00000497739 KIF3CO14782 793 aa12.93□□□□□ -0.34
PTPN3-206ENST00000497739 PRKCSHP14314 528 aaPredicted RBP12.93□□□□□ -0.34
PTPN3-206ENST00000497739 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
PTPN3-206ENST00000497739 MORC1Q86VD1 984 aa12.93□□□□□ -0.34
PTPN3-206ENST00000497739 TSHZ2Q9NRE2 1034 aa12.93□□□□□ -0.34
PTPN3-206ENST00000497739 NCAPD2Q15021 1401 aa12.93□□□□□ -0.34
PTPN3-206ENST00000497739 PCNTO95613 3336 aa12.93□□□□□ -0.34
PTPN3-206ENST00000497739 KIF24Q5T7B8 1368 aa12.93□□□□□ -0.34
PTPN3-206ENST00000497739 IGSF1Q8N6C5 1336 aa12.92□□□□□ -0.34
PTPN3-206ENST00000497739 CYP27B1O15528 508 aa12.92□□□□□ -0.34
PTPN3-206ENST00000497739 ZEB1P37275 1124 aaPredicted RBP12.92□□□□□ -0.34
PTPN3-206ENST00000497739 ZNF526Q8TF50 670 aaPredicted RBP12.92□□□□□ -0.34
PTPN3-206ENST00000497739 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
PTPN3-206ENST00000497739 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
PTPN3-206ENST00000497739 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
PTPN3-206ENST00000497739 SMIM5Q71RC9 77 aa12.91□□□□□ -0.34
PTPN3-206ENST00000497739 FLAD1Q8NFF5 587 aa12.91□□□□□ -0.34
PTPN3-206ENST00000497739 INSRP06213 1382 aa12.9□□□□□ -0.34
PTPN3-206ENST00000497739 PKD1L3Q7Z443 1732 aa12.9□□□□□ -0.34
PTPN3-206ENST00000497739 KIAA1551Q9HCM1 1747 aa12.9□□□□□ -0.34
PTPN3-206ENST00000497739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.89□□□□□ -0.35
PTPN3-206ENST00000497739 RAPGEF4Q8WZA2 1011 aa12.89□□□□□ -0.35
PTPN3-206ENST00000497739 PXDNLA1KZ92 1463 aa12.89□□□□□ -0.35
PTPN3-206ENST00000497739 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
PTPN3-206ENST00000497739 LINC00116Q8NCU8 138 aa12.88□□□□□ -0.35
PTPN3-206ENST00000497739 WWC3Q9ULE0 1092 aa12.88□□□□□ -0.35
PTPN3-206ENST00000497739 SSFA2P28290 1259 aa12.87□□□□□ -0.35
PTPN3-206ENST00000497739 HSP90AB2PQ58FF8 381 aa12.87□□□□□ -0.35
PTPN3-206ENST00000497739 MPRIPQ6WCQ1 1025 aa12.87□□□□□ -0.35
PTPN3-206ENST00000497739 DNAJC5GQ8N7S2 189 aa12.87□□□□□ -0.35
PTPN3-206ENST00000497739 PIGBQ92521 554 aa12.87□□□□□ -0.35
PTPN3-206ENST00000497739 AK7Q96M32 723 aa12.87□□□□□ -0.35
PTPN3-206ENST00000497739 EMILIN1Q9Y6C2 1016 aa12.87□□□□□ -0.35
PTPN3-206ENST00000497739 WASHC2AQ641Q2 1341 aa12.87□□□□□ -0.35
PTPN3-206ENST00000497739 PHF14O94880 888 aa12.86□□□□□ -0.35
PTPN3-206ENST00000497739 TATP17735 454 aaPredicted RBP12.86□□□□□ -0.35
PTPN3-206ENST00000497739 ITGB4P16144 1822 aa12.85□□□□□ -0.35
PTPN3-206ENST00000497739 KIF13BQ9NQT8 1826 aa12.85□□□□□ -0.35
PTPN3-206ENST00000497739 ITPK1Q13572 414 aa12.85□□□□□ -0.35
PTPN3-206ENST00000497739 CC2D1BQ5T0F9 858 aaKnown RBP12.85□□□□□ -0.35
PTPN3-206ENST00000497739 SMARCC1Q92922 1105 aaPredicted RBP12.85□□□□□ -0.35
PTPN3-206ENST00000497739 C10orf71Q711Q0 1435 aa12.85□□□□□ -0.35
PTPN3-206ENST00000497739 KDRP35968 1356 aa12.84□□□□□ -0.35
PTPN3-206ENST00000497739 LOC102724428A0A0B4J2F2 783 aa12.84□□□□□ -0.35
PTPN3-206ENST00000497739 SIK1P57059 783 aa12.84□□□□□ -0.35
PTPN3-206ENST00000497739 TMEM92Q6UXU6 159 aa12.84□□□□□ -0.35
PTPN3-206ENST00000497739 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.36
PTPN3-206ENST00000497739 APLP1P51693 650 aa12.83□□□□□ -0.36
PTPN3-206ENST00000497739 LHX8Q68G74 356 aa12.83□□□□□ -0.36
PTPN3-206ENST00000497739 POLKQ9UBT6 870 aa12.83□□□□□ -0.36
PTPN3-206ENST00000497739 TOMM70O94826 608 aa12.81□□□□□ -0.36
PTPN3-206ENST00000497739 MMP10P09238 476 aa12.81□□□□□ -0.36
PTPN3-206ENST00000497739 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
PTPN3-206ENST00000497739 G3V3G9 751 aa12.8□□□□□ -0.36
PTPN3-206ENST00000497739 GNPATO15228 680 aa12.8□□□□□ -0.36
PTPN3-206ENST00000497739 CFAP53Q96M91 514 aa12.8□□□□□ -0.36
PTPN3-206ENST00000497739 SLC4A9Q96Q91 983 aa12.8□□□□□ -0.36
PTPN3-206ENST00000497739 NMRK2Q9NPI5 230 aa12.8□□□□□ -0.36
PTPN3-206ENST00000497739 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
PTPN3-206ENST00000497739 OTUD5Q96G74 571 aa12.79□□□□□ -0.36
PTPN3-206ENST00000497739 CRISPLD2Q9H0B8 497 aa12.79□□□□□ -0.36
PTPN3-206ENST00000497739 NPC1L1Q9UHC9 1359 aa12.79□□□□□ -0.36
PTPN3-206ENST00000497739 ZNF831Q5JPB2 1677 aa12.78□□□□□ -0.36
PTPN3-206ENST00000497739 TGFB2P61812 414 aa12.78□□□□□ -0.36
PTPN3-206ENST00000497739 EIF4A2Q14240 407 aaKnown RBP12.78□□□□□ -0.36
PTPN3-206ENST00000497739 ATG3Q9NT62 314 aa12.78□□□□□ -0.36
PTPN3-206ENST00000497739 WDR90Q96KV7 1748 aa12.78□□□□□ -0.36
PTPN3-206ENST00000497739 N4BP2Q86UW6 1770 aaPredicted RBP12.78□□□□□ -0.36
PTPN3-206ENST00000497739 BRCA1P38398 1863 aaKnown RBP12.78□□□□□ -0.36
PTPN3-206ENST00000497739 C4AP0C0L4 1744 aa12.77□□□□□ -0.36
PTPN3-206ENST00000497739 A0A0G2JLW4 131 aa12.77□□□□□ -0.37
PTPN3-206ENST00000497739 PHKG2P15735 406 aa12.77□□□□□ -0.37
PTPN3-206ENST00000497739 KCNA3P22001 575 aa12.77□□□□□ -0.37
PTPN3-206ENST00000497739 TMOD3Q9NYL9 352 aa12.77□□□□□ -0.37
PTPN3-206ENST00000497739 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
PTPN3-206ENST00000497739 DPEP1P16444 411 aa12.76□□□□□ -0.37
PTPN3-206ENST00000497739 ATP6V1AP38606 617 aa12.76□□□□□ -0.37
PTPN3-206ENST00000497739 MTHFSP49914 203 aa12.76□□□□□ -0.37
PTPN3-206ENST00000497739 JMYQ8N9B5 988 aa12.76□□□□□ -0.37
PTPN3-206ENST00000497739 EYA1Q99502 592 aa12.76□□□□□ -0.37
PTPN3-206ENST00000497739 BCS1LQ9Y276 419 aa12.76□□□□□ -0.37
PTPN3-206ENST00000497739 PLEKHG2Q9H7P9 1386 aa12.76□□□□□ -0.37
PTPN3-206ENST00000497739 PER1O15534 1290 aaPredicted RBP12.75□□□□□ -0.37
PTPN3-206ENST00000497739 GYS1P13807 737 aa12.75□□□□□ -0.37
PTPN3-206ENST00000497739 HTRA3P83110 453 aa12.75□□□□□ -0.37
PTPN3-206ENST00000497739 MAMSTRQ6ZN01 415 aa12.75□□□□□ -0.37
PTPN3-206ENST00000497739 RBM46Q8TBY0 533 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms