RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 CNTROBQ8N137 903 aa20.39■□□□□ 0.85
RNF220-218ENST00000497469 TMC1Q8TDI8 760 aa20.39■□□□□ 0.85
RNF220-218ENST00000497469 HABP4Q5JVS0 413 aaKnown RBP20.38■□□□□ 0.85
RNF220-218ENST00000497469 RC3H1Q5TC82 1133 aaKnown RBP20.38■□□□□ 0.85
RNF220-218ENST00000497469 ADAMTSL1Q8N6G6 1762 aa20.37■□□□□ 0.85
RNF220-218ENST00000497469 ECE1P42892 770 aa20.37■□□□□ 0.85
RNF220-218ENST00000497469 RRS1Q15050 365 aaKnown RBP20.37■□□□□ 0.85
RNF220-218ENST00000497469 C2CD5Q86YS7 1000 aa20.37■□□□□ 0.85
RNF220-218ENST00000497469 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
RNF220-218ENST00000497469 C21orf2O43822 256 aa20.36■□□□□ 0.85
RNF220-218ENST00000497469 NKX1-1Q15270 411 aaPredicted RBP20.36■□□□□ 0.85
RNF220-218ENST00000497469 HDGFL2Q7Z4V5 671 aaPredicted RBP20.36■□□□□ 0.85
RNF220-218ENST00000497469 MYH14Q7Z406 1995 aaKnown RBP20.35■□□□□ 0.85
RNF220-218ENST00000497469 SCN4AP35499 1836 aa20.34■□□□□ 0.85
RNF220-218ENST00000497469 TM4SF1P30408 202 aa20.34■□□□□ 0.85
RNF220-218ENST00000497469 GCC1Q96CN9 775 aa20.34■□□□□ 0.85
RNF220-218ENST00000497469 L3MBTL3Q96JM7 780 aaPredicted RBP20.34■□□□□ 0.85
RNF220-218ENST00000497469 SLC12A5Q9H2X9 1139 aa20.34■□□□□ 0.85
RNF220-218ENST00000497469 CARMIL3Q8ND23 1372 aa20.34■□□□□ 0.85
RNF220-218ENST00000497469 DDX21Q9NR30 783 aaKnown RBP eCLIP20.33■□□□□ 0.85
RNF220-218ENST00000497469 A0A1W2PP64 1363 aa20.33■□□□□ 0.84
RNF220-218ENST00000497469 RTL1A6NKG5 1358 aa20.33■□□□□ 0.84
RNF220-218ENST00000497469 AFDNP55196 1824 aaKnown RBP20.32■□□□□ 0.84
RNF220-218ENST00000497469 EPHX2P34913 555 aa20.32■□□□□ 0.84
RNF220-218ENST00000497469 FER1L6Q2WGJ9 1857 aa20.31■□□□□ 0.84
RNF220-218ENST00000497469 DLL1O00548 723 aa20.31■□□□□ 0.84
RNF220-218ENST00000497469 COG3Q96JB2 828 aa20.31■□□□□ 0.84
RNF220-218ENST00000497469 TAOK3Q9H2K8 898 aa20.31■□□□□ 0.84
RNF220-218ENST00000497469 HACL1Q9UJ83 578 aa20.31■□□□□ 0.84
RNF220-218ENST00000497469 ZNF541Q9H0D2 1346 aa20.29■□□□□ 0.84
RNF220-218ENST00000497469 H0YIN7 160 aa20.29■□□□□ 0.84
RNF220-218ENST00000497469 CA12O43570 354 aa20.29■□□□□ 0.84
RNF220-218ENST00000497469 CRKLP46109 303 aaKnown RBP20.29■□□□□ 0.84
RNF220-218ENST00000497469 USPL1Q5W0Q7 1092 aa20.29■□□□□ 0.84
RNF220-218ENST00000497469 ZNF622Q969S3 477 aaKnown RBP eCLIP20.29■□□□□ 0.849e-6■■□□□ 12.8
RNF220-218ENST00000497469 RNF123Q5XPI4 1314 aa20.28■□□□□ 0.84
RNF220-218ENST00000497469 HSP90AB2PQ58FF8 381 aa20.28■□□□□ 0.84
RNF220-218ENST00000497469 ZNF831Q5JPB2 1677 aa20.27■□□□□ 0.84
RNF220-218ENST00000497469 RAB3GAP2Q9H2M9 1393 aa20.27■□□□□ 0.84
RNF220-218ENST00000497469 MAP2K2P36507 400 aa20.27■□□□□ 0.84
RNF220-218ENST00000497469 NFIXQ14938 502 aa20.27■□□□□ 0.84
RNF220-218ENST00000497469 NBPF15Q8N660 670 aa20.27■□□□□ 0.84
RNF220-218ENST00000497469 SPG7Q9UQ90 795 aa20.26■□□□□ 0.83
RNF220-218ENST00000497469 NRXN2Q9P2S2 1712 aa20.25■□□□□ 0.83
RNF220-218ENST00000497469 CIAPIN1Q6FI81 312 aa20.25■□□□□ 0.83
RNF220-218ENST00000497469 ADAMTS7Q9UKP4 1686 aa20.25■□□□□ 0.83
RNF220-218ENST00000497469 LTBP3Q9NS15 1303 aa20.25■□□□□ 0.83
RNF220-218ENST00000497469 TRAF5O00463 557 aa20.24■□□□□ 0.83
RNF220-218ENST00000497469 SERPINB2P05120 415 aa20.24■□□□□ 0.83
RNF220-218ENST00000497469 FXR1P51114 621 aaKnown RBP eCLIP20.24■□□□□ 0.83
RNF220-218ENST00000497469 CST9Q5W186 159 aa20.24■□□□□ 0.83
RNF220-218ENST00000497469 TLL2Q9Y6L7 1015 aa20.24■□□□□ 0.83
RNF220-218ENST00000497469 ZPR1O75312 459 aa20.23■□□□□ 0.83
RNF220-218ENST00000497469 PHKG2P15735 406 aa20.23■□□□□ 0.83
RNF220-218ENST00000497469 PNMA8AQ86V59 439 aaPredicted RBP20.23■□□□□ 0.83
RNF220-218ENST00000497469 BRPF1P55201 1214 aaPredicted RBP20.22■□□□□ 0.83
RNF220-218ENST00000497469 TERF2IPQ9NYB0 399 aa20.22■□□□□ 0.83
RNF220-218ENST00000497469 COL11A2P13942 1736 aaPredicted RBP20.22■□□□□ 0.83
RNF220-218ENST00000497469 PTCD1O75127 700 aaKnown RBP20.21■□□□□ 0.83
RNF220-218ENST00000497469 INSRP06213 1382 aa20.21■□□□□ 0.83
RNF220-218ENST00000497469 CCDC24Q8N4L8 307 aa20.2■□□□□ 0.82
RNF220-218ENST00000497469 IFNL2Q8IZJ0 200 aa20.19■□□□□ 0.82
RNF220-218ENST00000497469 ZIC5Q96T25 663 aa20.19■□□□□ 0.82
RNF220-218ENST00000497469 INTS5Q6P9B9 1019 aaKnown RBP20.17■□□□□ 0.82
RNF220-218ENST00000497469 ANKRD31Q8N7Z5 1873 aa20.17■□□□□ 0.82
RNF220-218ENST00000497469 TJP1Q07157 1748 aa20.16■□□□□ 0.82
RNF220-218ENST00000497469 CACNA1SQ13698 1873 aa20.16■□□□□ 0.82
RNF220-218ENST00000497469 BICDL1Q6ZP65 573 aa20.16■□□□□ 0.82
RNF220-218ENST00000497469 TRPM7Q96QT4 1865 aa20.14■□□□□ 0.81
RNF220-218ENST00000497469 SLX4Q8IY92 1834 aa20.14■□□□□ 0.81
RNF220-218ENST00000497469 FLT4P35916 1363 aa20.14■□□□□ 0.81
RNF220-218ENST00000497469 SAPCD2Q86UD0 394 aa20.14■□□□□ 0.81
RNF220-218ENST00000497469 BCL2L12Q9HB09 334 aa20.14■□□□□ 0.81
RNF220-218ENST00000497469 ZNF277Q9NRM2 450 aaPredicted RBP20.14■□□□□ 0.81
RNF220-218ENST00000497469 ROCK2O75116 1388 aaKnown RBP20.13■□□□□ 0.81
RNF220-218ENST00000497469 PRPF40BQ6NWY9 871 aaKnown RBP20.13■□□□□ 0.81
RNF220-218ENST00000497469 GGNBP2Q9H3C7 697 aa20.13■□□□□ 0.81
RNF220-218ENST00000497469 HPS5Q9UPZ3 1129 aa20.13■□□□□ 0.81
RNF220-218ENST00000497469 NCAPD2Q15021 1401 aa20.12■□□□□ 0.81
RNF220-218ENST00000497469 SOS1Q07889 1333 aaPredicted RBP20.11■□□□□ 0.81
RNF220-218ENST00000497469 CELF2O95319 508 aaKnown RBP20.1■□□□□ 0.81
RNF220-218ENST00000497469 SLC17A8Q8NDX2 589 aa20.1■□□□□ 0.81
RNF220-218ENST00000497469 NARFQ9UHQ1 456 aa20.1■□□□□ 0.81
RNF220-218ENST00000497469 ERVV-2B6SEH9 535 aa20.09■□□□□ 0.81
RNF220-218ENST00000497469 PDE6BP35913 854 aa20.08■□□□□ 0.81
RNF220-218ENST00000497469 CTU1Q7Z7A3 348 aaKnown RBP20.08■□□□□ 0.81
RNF220-218ENST00000497469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.08■□□□□ 0.81
RNF220-218ENST00000497469 GJA3Q9Y6H8 435 aa20.08■□□□□ 0.81
RNF220-218ENST00000497469 COL15A1P39059 1388 aa20.08■□□□□ 0.8
RNF220-218ENST00000497469 CABP4P57796 275 aa20.07■□□□□ 0.8
RNF220-218ENST00000497469 OLFM4Q6UX06 510 aa20.07■□□□□ 0.8
RNF220-218ENST00000497469 ZNF408Q9H9D4 720 aa20.07■□□□□ 0.8
RNF220-218ENST00000497469 EPS15P42566 896 aa20.06■□□□□ 0.8
RNF220-218ENST00000497469 DNAJC10Q8IXB1 793 aa20.06■□□□□ 0.8
RNF220-218ENST00000497469 BRIP1Q9BX63 1249 aa20.06■□□□□ 0.8
RNF220-218ENST00000497469 EMILIN1Q9Y6C2 1016 aa20.06■□□□□ 0.8
RNF220-218ENST00000497469 TONSLQ96HA7 1378 aa20.06■□□□□ 0.8
RNF220-218ENST00000497469 SZT2Q5T011 3432 aa20.05■□□□□ 0.8
RNF220-218ENST00000497469 SOGA3Q5TF21 947 aa20.05■□□□□ 0.8
RNF220-218ENST00000497469 GPC2Q8N158 579 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms