RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 TNS4Q8IZW8 715 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 ZNF295-AS1Q8N0V1 137 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 RHBDD1Q8TEB9 315 aa7.58□□□□□ -1.2
SMC4-225ENST00000497203 NANOS1Q8WY41 292 aaKnown RBP7.58□□□□□ -1.2
SMC4-225ENST00000497203 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.57□□□□□ -1.2
SMC4-225ENST00000497203 FAM196BA6NMK8 535 aa7.57□□□□□ -1.2
SMC4-225ENST00000497203 ITGA6P23229 1130 aa7.57□□□□□ -1.2
SMC4-225ENST00000497203 GTF2E1P29083 439 aaPredicted RBP7.57□□□□□ -1.2
SMC4-225ENST00000497203 SRPK2P78362 688 aaKnown RBP7.57□□□□□ -1.2
SMC4-225ENST00000497203 WDR44Q5JSH3 913 aa7.57□□□□□ -1.2
SMC4-225ENST00000497203 LCE3BQ5TA77 95 aa7.57□□□□□ -1.2
SMC4-225ENST00000497203 COL25A1Q9BXS0 654 aaPredicted RBP7.57□□□□□ -1.2
SMC4-225ENST00000497203 TIMMDC1Q9NPL8 285 aa7.57□□□□□ -1.2
SMC4-225ENST00000497203 CUEDC1Q9NWM3 386 aaPredicted RBP7.57□□□□□ -1.2
SMC4-225ENST00000497203 SCHIP1Q9P0W5 487 aaPredicted RBP7.57□□□□□ -1.2
SMC4-225ENST00000497203 DYRK1BQ9Y463 629 aa7.57□□□□□ -1.2
SMC4-225ENST00000497203 CDK2AP1O14519 115 aa7.56□□□□□ -1.2
SMC4-225ENST00000497203 DPYDQ12882 1025 aa7.56□□□□□ -1.2
SMC4-225ENST00000497203 TSEN2Q8NCE0 465 aaKnown RBP7.56□□□□□ -1.2
SMC4-225ENST00000497203 ARHGEF15O94989 841 aa7.55□□□□□ -1.2
SMC4-225ENST00000497203 SLURP2P0DP57 97 aa7.55□□□□□ -1.2
SMC4-225ENST00000497203 PLA2G4AP47712 749 aa7.55□□□□□ -1.2
SMC4-225ENST00000497203 SEC13P55735 322 aa7.55□□□□□ -1.2
SMC4-225ENST00000497203 FOXK2Q01167 660 aa7.55□□□□□ -1.2
SMC4-225ENST00000497203 RNFT1Q5M7Z0 435 aa7.55□□□□□ -1.2
SMC4-225ENST00000497203 TBCELQ5QJ74 424 aa7.55□□□□□ -1.2
SMC4-225ENST00000497203 ANKMY2Q8IV38 441 aa7.55□□□□□ -1.2
SMC4-225ENST00000497203 SVOPQ8N4V2 548 aa7.55□□□□□ -1.2
SMC4-225ENST00000497203 GAS2L1Q99501 681 aaPredicted RBP7.55□□□□□ -1.2
SMC4-225ENST00000497203 NIFKQ9BYG3 293 aaKnown RBP7.55□□□□□ -1.2
SMC4-225ENST00000497203 RBM19Q9Y4C8 960 aaKnown RBP7.55□□□□□ -1.2
SMC4-225ENST00000497203 M0R2N6 131 aa7.54□□□□□ -1.2
SMC4-225ENST00000497203 RIPOR1Q6ZS17 1223 aa7.54□□□□□ -1.2
SMC4-225ENST00000497203 SLC9A9Q8IVB4 645 aa7.54□□□□□ -1.2
SMC4-225ENST00000497203 VWA5B2Q8N398 1253 aa7.54□□□□□ -1.2
SMC4-225ENST00000497203 A0A1B0GTH6 734 aa7.53□□□□□ -1.2
SMC4-225ENST00000497203 CDC14CA4D256 554 aa7.53□□□□□ -1.2
SMC4-225ENST00000497203 LGR5O75473 907 aa7.53□□□□□ -1.2
SMC4-225ENST00000497203 F11P03951 625 aa7.53□□□□□ -1.2
SMC4-225ENST00000497203 ZDHHC1Q8WTX9 485 aa7.53□□□□□ -1.2
SMC4-225ENST00000497203 TSPAN10Q9H1Z9 355 aaPredicted RBP7.53□□□□□ -1.2
SMC4-225ENST00000497203 GPAMQ9HCL2 828 aa7.53□□□□□ -1.2
SMC4-225ENST00000497203 CABP1Q9NZU7 370 aa7.53□□□□□ -1.2
SMC4-225ENST00000497203 PARP3Q9Y6F1 533 aa7.53□□□□□ -1.2
SMC4-225ENST00000497203 MSX1P28360 303 aa7.52□□□□□ -1.21
SMC4-225ENST00000497203 IRS1P35568 1242 aa7.52□□□□□ -1.21
SMC4-225ENST00000497203 DBN1Q16643 649 aa7.52□□□□□ -1.21
SMC4-225ENST00000497203 KANK3Q6NY19 840 aa7.52□□□□□ -1.21
SMC4-225ENST00000497203 WHAMMQ8TF30 809 aa7.52□□□□□ -1.21
SMC4-225ENST00000497203 PBXIP1Q96AQ6 731 aa7.52□□□□□ -1.21
SMC4-225ENST00000497203 KRTAP9-9Q9BYP9 154 aa7.52□□□□□ -1.21
SMC4-225ENST00000497203 KRTAP9-4Q9BYQ2 154 aa7.52□□□□□ -1.21
SMC4-225ENST00000497203 ZMIZ1Q9ULJ6 1067 aa7.52□□□□□ -1.21
SMC4-225ENST00000497203 NOVA2Q9UNW9 492 aaKnown RBP7.52□□□□□ -1.21
SMC4-225ENST00000497203 C21orf2O43822 256 aa7.51□□□□□ -1.21
SMC4-225ENST00000497203 TRIM22Q8IYM9 498 aa7.51□□□□□ -1.21
SMC4-225ENST00000497203 AIDAQ96BJ3 306 aa7.51□□□□□ -1.21
SMC4-225ENST00000497203 ZNF837Q96EG3 531 aaPredicted RBP7.51□□□□□ -1.21
SMC4-225ENST00000497203 ATG7O95352 703 aa7.5□□□□□ -1.21
SMC4-225ENST00000497203 THBS1P07996 1170 aa7.5□□□□□ -1.21
SMC4-225ENST00000497203 ATP4AP20648 1035 aa7.5□□□□□ -1.21
SMC4-225ENST00000497203 TEAD4Q15561 434 aa7.5□□□□□ -1.21
SMC4-225ENST00000497203 SH3PXD2AQ5TCZ1 1133 aa7.5□□□□□ -1.21
SMC4-225ENST00000497203 SV2AQ7L0J3 742 aa7.5□□□□□ -1.21
SMC4-225ENST00000497203 FAM200AQ8TCP9 573 aa7.5□□□□□ -1.21
SMC4-225ENST00000497203 STK32AQ8WU08 396 aa7.5□□□□□ -1.21
SMC4-225ENST00000497203 L3MBTL2Q969R5 705 aa7.5□□□□□ -1.21
SMC4-225ENST00000497203 KRTAP4-12Q9BQ66 201 aa7.5□□□□□ -1.21
SMC4-225ENST00000497203 HINFPQ9BQA5 517 aa7.5□□□□□ -1.21
SMC4-225ENST00000497203 RUBCNLQ9H714 662 aa7.5□□□□□ -1.21
SMC4-225ENST00000497203 NOS2P35228 1153 aa7.49□□□□□ -1.21
SMC4-225ENST00000497203 TXLNAP40222 546 aa7.49□□□□□ -1.21
SMC4-225ENST00000497203 GAS2L2Q8NHY3 880 aa7.49□□□□□ -1.21
SMC4-225ENST00000497203 H7C1W4 665 aa7.48□□□□□ -1.21
SMC4-225ENST00000497203 EML1O00423 815 aa7.48□□□□□ -1.21
SMC4-225ENST00000497203 PSMA6P60900 246 aaKnown RBP7.48□□□□□ -1.21
SMC4-225ENST00000497203 ELOAQ14241 798 aaKnown RBP7.48□□□□□ -1.21
SMC4-225ENST00000497203 Q8N3U1 123 aa7.48□□□□□ -1.21
SMC4-225ENST00000497203 SCG3Q8WXD2 468 aaKnown RBP7.48□□□□□ -1.21
SMC4-225ENST00000497203 GTPBP3Q969Y2 492 aaKnown RBP7.48□□□□□ -1.21
SMC4-225ENST00000497203 NUCKS1Q9H1E3 243 aaKnown RBP7.48□□□□□ -1.21
SMC4-225ENST00000497203 ZNF232Q9UNY5 417 aa7.48□□□□□ -1.21
SMC4-225ENST00000497203 ATAD2Q6PL18 1390 aa7.47□□□□□ -1.21
SMC4-225ENST00000497203 SERTM1A2A2V5 107 aa7.47□□□□□ -1.21
SMC4-225ENST00000497203 GPR25O00155 361 aa7.47□□□□□ -1.21
SMC4-225ENST00000497203 PPP1R12BO60237 982 aaPredicted RBP7.47□□□□□ -1.21
SMC4-225ENST00000497203 NBPF1Q3BBV0 1214 aa7.47□□□□□ -1.21
SMC4-225ENST00000497203 C1orf216Q8TAB5 229 aa7.47□□□□□ -1.21
SMC4-225ENST00000497203 SCARF2Q96GP6 870 aaPredicted RBP7.47□□□□□ -1.21
SMC4-225ENST00000497203 GMCL1Q96IK5 515 aa7.47□□□□□ -1.21
SMC4-225ENST00000497203 ZDHHC3Q9NYG2 299 aa7.47□□□□□ -1.21
SMC4-225ENST00000497203 KRTAP4-8A0A0G2JLE6 195 aa7.46□□□□□ -1.22
SMC4-225ENST00000497203 CSB-PGBD3P0DP91 1061 aa7.46□□□□□ -1.22
SMC4-225ENST00000497203 FAM69CQ0P6D2 419 aa7.46□□□□□ -1.22
SMC4-225ENST00000497203 UBAP2LQ14157 1087 aaKnown RBP7.46□□□□□ -1.22
SMC4-225ENST00000497203 TMEM164Q5U3C3 297 aa7.46□□□□□ -1.22
SMC4-225ENST00000497203 POTEAQ6S8J7 498 aa7.46□□□□□ -1.22
SMC4-225ENST00000497203 PGBD3Q8N328 593 aa7.46□□□□□ -1.22
SMC4-225ENST00000497203 CHMP7Q8WUX9 453 aaPredicted RBP7.46□□□□□ -1.22
SMC4-225ENST00000497203 CRISPLD1Q9H336 500 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms