RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 C4orf17Q53FE4 359 aa8.93□□□□□ -0.98
TRIM4-205ENST00000496896 ZMYND15Q9H091 742 aa8.93□□□□□ -0.98
TRIM4-205ENST00000496896 MKRN1Q9UHC7 482 aaKnown RBP8.93□□□□□ -0.98
TRIM4-205ENST00000496896 M0R2N6 131 aa8.92□□□□□ -0.98
TRIM4-205ENST00000496896 ZBTB7BO15156 539 aaPredicted RBP8.92□□□□□ -0.98
TRIM4-205ENST00000496896 FURINP09958 794 aa8.92□□□□□ -0.98
TRIM4-205ENST00000496896 CLDN10P78369 228 aa8.92□□□□□ -0.98
TRIM4-205ENST00000496896 PSME1Q06323 249 aa8.92□□□□□ -0.98
TRIM4-205ENST00000496896 LBRQ14739 615 aaKnown RBP8.92□□□□□ -0.98
TRIM4-205ENST00000496896 ZNF295-AS1Q8N0V1 137 aa8.92□□□□□ -0.98
TRIM4-205ENST00000496896 SIX5Q8N196 739 aa8.92□□□□□ -0.98
TRIM4-205ENST00000496896 NIFKQ9BYG3 293 aaKnown RBP8.92□□□□□ -0.98
TRIM4-205ENST00000496896 DNAAF2Q9NVR5 837 aaKnown RBP8.92□□□□□ -0.98
TRIM4-205ENST00000496896 IQSEC3Q9UPP2 1182 aaPredicted RBP8.92□□□□□ -0.98
TRIM4-205ENST00000496896 KRBA1A5PL33 1030 aa8.91□□□□□ -0.98
TRIM4-205ENST00000496896 OGFOD1Q8N543 542 aa8.91□□□□□ -0.98
TRIM4-205ENST00000496896 C1orf216Q8TAB5 229 aa8.91□□□□□ -0.98
TRIM4-205ENST00000496896 ZNF358Q9NW07 568 aa8.91□□□□□ -0.98
TRIM4-205ENST00000496896 EPHA4P54764 986 aa8.9□□□□□ -0.98
TRIM4-205ENST00000496896 DBN1Q16643 649 aa8.9□□□□□ -0.98
TRIM4-205ENST00000496896 CCDC102BQ68D86 513 aa8.9□□□□□ -0.98
TRIM4-205ENST00000496896 ALYREFQ86V81 257 aaKnown RBP8.9□□□□□ -0.98
TRIM4-205ENST00000496896 GAS2L1Q99501 681 aaPredicted RBP8.9□□□□□ -0.98
TRIM4-205ENST00000496896 SCHIP1Q9P0W5 487 aaPredicted RBP8.9□□□□□ -0.98
TRIM4-205ENST00000496896 SERTAD1Q9UHV2 236 aa8.9□□□□□ -0.98
TRIM4-205ENST00000496896 ZNF777Q9ULD5 760 aaPredicted RBP8.9□□□□□ -0.98
TRIM4-205ENST00000496896 RIPOR1Q6ZS17 1223 aa8.89□□□□□ -0.99
TRIM4-205ENST00000496896 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.89□□□□□ -0.99
TRIM4-205ENST00000496896 TPCN2Q8NHX9 752 aa8.89□□□□□ -0.99
TRIM4-205ENST00000496896 TRERF1Q96PN7 1200 aa8.89□□□□□ -0.99
TRIM4-205ENST00000496896 NSFL1CQ9UNZ2 370 aaKnown RBP8.89□□□□□ -0.99
TRIM4-205ENST00000496896 KIAA1024Q9UPX6 916 aa8.89□□□□□ -0.99
TRIM4-205ENST00000496896 OIP5O43482 229 aa8.88□□□□□ -0.99
TRIM4-205ENST00000496896 DKK1O94907 266 aa8.88□□□□□ -0.99
TRIM4-205ENST00000496896 PHKA2P46019 1235 aa8.88□□□□□ -0.99
TRIM4-205ENST00000496896 KANK4Q5T7N3 995 aaPredicted RBP8.88□□□□□ -0.99
TRIM4-205ENST00000496896 CRISPLD1Q9H336 500 aa8.88□□□□□ -0.99
TRIM4-205ENST00000496896 MX2P20592 715 aa8.87□□□□□ -0.99
TRIM4-205ENST00000496896 MSX1P28360 303 aa8.87□□□□□ -0.99
TRIM4-205ENST00000496896 KRTAP1-3Q8IUG1 177 aa8.87□□□□□ -0.99
TRIM4-205ENST00000496896 GTPBP3Q969Y2 492 aaKnown RBP8.87□□□□□ -0.99
TRIM4-205ENST00000496896 NUCKS1Q9H1E3 243 aaKnown RBP8.87□□□□□ -0.99
TRIM4-205ENST00000496896 MKL2Q9ULH7 1088 aa8.87□□□□□ -0.99
TRIM4-205ENST00000496896 FAM196BA6NMK8 535 aa8.86□□□□□ -0.99
TRIM4-205ENST00000496896 RASA1P20936 1047 aa8.86□□□□□ -0.99
TRIM4-205ENST00000496896 PLA2G4AP47712 749 aa8.86□□□□□ -0.99
TRIM4-205ENST00000496896 SNRPNP63162 240 aaKnown RBP8.86□□□□□ -0.99
TRIM4-205ENST00000496896 CFAP70Q5T0N1 1121 aa8.86□□□□□ -0.99
TRIM4-205ENST00000496896 ZDHHC3Q9NYG2 299 aa8.86□□□□□ -0.99
TRIM4-205ENST00000496896 RBM19Q9Y4C8 960 aaKnown RBP8.86□□□□□ -0.99
TRIM4-205ENST00000496896 CSB-PGBD3P0DP91 1061 aa8.85□□□□□ -0.99
TRIM4-205ENST00000496896 LMOD1P29536 600 aaPredicted RBP8.85□□□□□ -0.99
TRIM4-205ENST00000496896 NBPF1Q3BBV0 1214 aa8.85□□□□□ -0.99
TRIM4-205ENST00000496896 LARP1Q6PKG0 1096 aaKnown RBP8.85□□□□□ -0.99
TRIM4-205ENST00000496896 PGBD3Q8N328 593 aa8.85□□□□□ -0.99
TRIM4-205ENST00000496896 VRTNQ9H8Y1 702 aa8.85□□□□□ -0.99
TRIM4-205ENST00000496896 ATP4AP20648 1035 aa8.84□□□□□ -0.99
TRIM4-205ENST00000496896 PTK7Q13308 1070 aa8.84□□□□□ -0.99
TRIM4-205ENST00000496896 TEAD4Q15561 434 aa8.84□□□□□ -0.99
TRIM4-205ENST00000496896 EFHC2Q5JST6 749 aa8.84□□□□□ -0.99
TRIM4-205ENST00000496896 POTEAQ6S8J7 498 aa8.84□□□□□ -0.99
TRIM4-205ENST00000496896 CFHR5Q9BXR6 569 aa8.84□□□□□ -0.99
TRIM4-205ENST00000496896 GPAMQ9HCL2 828 aa8.84□□□□□ -0.99
TRIM4-205ENST00000496896 USP3Q9Y6I4 520 aa8.84□□□□□ -0.99
TRIM4-205ENST00000496896 THBS1P07996 1170 aa8.83□□□□□ -1
TRIM4-205ENST00000496896 SEC13P55735 322 aa8.83□□□□□ -1
TRIM4-205ENST00000496896 UBAP2LQ14157 1087 aaKnown RBP8.83□□□□□ -1
TRIM4-205ENST00000496896 NLRP8Q86W28 1048 aa8.83□□□□□ -1
TRIM4-205ENST00000496896 TNS4Q8IZW8 715 aa8.83□□□□□ -1
TRIM4-205ENST00000496896 ZNF594Q96JF6 807 aaPredicted RBP8.83□□□□□ -1
TRIM4-205ENST00000496896 OXCT2Q9BYC2 517 aaPredicted RBP8.83□□□□□ -1
TRIM4-205ENST00000496896 CABP1Q9NZU7 370 aa8.83□□□□□ -1
TRIM4-205ENST00000496896 TATP17735 454 aaPredicted RBP8.82□□□□□ -1
TRIM4-205ENST00000496896 COL8A1P27658 744 aa8.82□□□□□ -1
TRIM4-205ENST00000496896 HIRAP54198 1017 aaPredicted RBP8.82□□□□□ -1
TRIM4-205ENST00000496896 CRTC2Q53ET0 693 aaPredicted RBP8.82□□□□□ -1
TRIM4-205ENST00000496896 SLC9A9Q8IVB4 645 aa8.82□□□□□ -1
TRIM4-205ENST00000496896 PHF24Q9UPV7 400 aa8.82□□□□□ -1
TRIM4-205ENST00000496896 GPC6Q9Y625 555 aaPredicted RBP8.82□□□□□ -1
TRIM4-205ENST00000496896 USP17L15C9J2P7 530 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 USP17L10C9JJH3 530 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 USP17L13C9JLJ4 530 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 USP17L12C9JPN9 530 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 USP17L11C9JVI0 530 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 USP17L21D6R901 530 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 USP17L18D6R9N7 530 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 USP17L22D6RA61 530 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 USP17L17D6RBQ6 530 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 USP17L19D6RCP7 530 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 USP17L20D6RJB6 530 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 MAP2K3P46734 347 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 PSMA6P60900 246 aaKnown RBP8.81□□□□□ -1
TRIM4-205ENST00000496896 USP17L24Q0WX57 530 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 FIGNL1Q6PIW4 674 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 STAG2Q8N3U4 1231 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 GAS2L2Q8NHY3 880 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 ZDHHC1Q8WTX9 485 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 RUBCNLQ9H714 662 aa8.81□□□□□ -1
TRIM4-205ENST00000496896 NOS2P35228 1153 aa8.8□□□□□ -1
TRIM4-205ENST00000496896 ANKMY2Q8IV38 441 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms