RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 UBR2Q8IWV8 1755 aa15.71■□□□□ 0.11
THBS3-208ENST00000496332 SIPA1L3O60292 1781 aaPredicted RBP15.7■□□□□ 0.1
THBS3-208ENST00000496332 GRIN3BO60391 1043 aa15.7■□□□□ 0.1
THBS3-208ENST00000496332 ZEB1P37275 1124 aaPredicted RBP15.7■□□□□ 0.1
THBS3-208ENST00000496332 USPL1Q5W0Q7 1092 aa15.7■□□□□ 0.1
THBS3-208ENST00000496332 PNNQ9H307 717 aaKnown RBP15.7■□□□□ 0.1
THBS3-208ENST00000496332 C4AP0C0L4 1744 aa15.7■□□□□ 0.1
THBS3-208ENST00000496332 MYBBP1AQ9BQG0 1328 aaKnown RBP15.69■□□□□ 0.1
THBS3-208ENST00000496332 NARFQ9UHQ1 456 aa15.69■□□□□ 0.1
THBS3-208ENST00000496332 WWC3Q9ULE0 1092 aa15.69■□□□□ 0.1
THBS3-208ENST00000496332 COL15A1P39059 1388 aa15.69■□□□□ 0.1
THBS3-208ENST00000496332 MAPK8IP3Q9UPT6 1336 aa15.68■□□□□ 0.1
THBS3-208ENST00000496332 NFE2L2Q16236 605 aa15.68■□□□□ 0.1
THBS3-208ENST00000496332 TM4SF1P30408 202 aa15.67■□□□□ 0.1
THBS3-208ENST00000496332 EIF5P55010 431 aaKnown RBP15.67■□□□□ 0.1
THBS3-208ENST00000496332 TGFB2P61812 414 aa15.67■□□□□ 0.1
THBS3-208ENST00000496332 DDR1Q08345 913 aa15.67■□□□□ 0.1
THBS3-208ENST00000496332 TAF7Q15545 349 aaPredicted RBP15.67■□□□□ 0.1
THBS3-208ENST00000496332 C10orf71Q711Q0 1435 aa15.67■□□□□ 0.1
THBS3-208ENST00000496332 A0A087WZG4 1122 aa15.66■□□□□ 0.1
THBS3-208ENST00000496332 A1BGP04217 495 aa15.66■□□□□ 0.1
THBS3-208ENST00000496332 MIS18AQ9NYP9 233 aa15.66■□□□□ 0.1
THBS3-208ENST00000496332 A0A0G2JLW4 131 aa15.65■□□□□ 0.1
THBS3-208ENST00000496332 PRAMEF22A3QJZ6 481 aa15.65■□□□□ 0.1
THBS3-208ENST00000496332 POLRMTO00411 1230 aaKnown RBP15.65■□□□□ 0.1
THBS3-208ENST00000496332 SNRPA1P09661 255 aaKnown RBP15.65■□□□□ 0.1
THBS3-208ENST00000496332 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
THBS3-208ENST00000496332 ZNF330Q9Y3S2 320 aaPredicted RBP15.65■□□□□ 0.1
THBS3-208ENST00000496332 USP16Q9Y5T5 823 aa15.65■□□□□ 0.1
THBS3-208ENST00000496332 PXDNLA1KZ92 1463 aa15.65■□□□□ 0.1
THBS3-208ENST00000496332 IL6STP40189 918 aaPredicted RBP15.64■□□□□ 0.09
THBS3-208ENST00000496332 NFIXQ14938 502 aa15.64■□□□□ 0.09
THBS3-208ENST00000496332 ZNF784Q8NCA9 323 aaPredicted RBP15.64■□□□□ 0.09
THBS3-208ENST00000496332 THUMPD2Q9BTF0 503 aaKnown RBP15.64■□□□□ 0.09
THBS3-208ENST00000496332 PRKRIP1Q9H875 184 aaPredicted RBP15.64■□□□□ 0.09
THBS3-208ENST00000496332 DPEP1P16444 411 aa15.63■□□□□ 0.09
THBS3-208ENST00000496332 NPM2Q86SE8 214 aaKnown RBP15.63■□□□□ 0.09
THBS3-208ENST00000496332 PNISRQ8TF01 805 aaKnown RBP15.63■□□□□ 0.09
THBS3-208ENST00000496332 TBC1D2BQ9UPU7 963 aa15.63■□□□□ 0.09
THBS3-208ENST00000496332 RIPK4P57078 832 aa15.62■□□□□ 0.09
THBS3-208ENST00000496332 CHD4Q14839 1912 aa15.62■□□□□ 0.09
THBS3-208ENST00000496332 KIF13BQ9NQT8 1826 aa15.61■□□□□ 0.09
THBS3-208ENST00000496332 PIP4K2AP48426 406 aaPredicted RBP15.61■□□□□ 0.09
THBS3-208ENST00000496332 WDR43Q15061 677 aaKnown RBP eCLIP15.61■□□□□ 0.09
THBS3-208ENST00000496332 SERPINB2P05120 415 aa15.6■□□□□ 0.09
THBS3-208ENST00000496332 KCNA3P22001 575 aa15.6■□□□□ 0.09
THBS3-208ENST00000496332 TMPOP42166 694 aaKnown RBP15.6■□□□□ 0.09
THBS3-208ENST00000496332 BICDL1Q6ZP65 573 aa15.6■□□□□ 0.09
THBS3-208ENST00000496332 CCDC146Q8IYE0 955 aa15.6■□□□□ 0.09
THBS3-208ENST00000496332 BCS1LQ9Y276 419 aa15.6■□□□□ 0.09
THBS3-208ENST00000496332 KIAA1551Q9HCM1 1747 aa15.6■□□□□ 0.09
THBS3-208ENST00000496332 DLG5Q8TDM6 1919 aa15.59■□□□□ 0.09
THBS3-208ENST00000496332 TBC1D9BQ66K14 1250 aa15.59■□□□□ 0.09
THBS3-208ENST00000496332 DZIP3Q86Y13 1208 aaKnown RBP15.59■□□□□ 0.09
THBS3-208ENST00000496332 ADAMTS8Q9UP79 889 aa15.59■□□□□ 0.09
THBS3-208ENST00000496332 N4BP2Q86UW6 1770 aaPredicted RBP15.59■□□□□ 0.09
THBS3-208ENST00000496332 NBPF26B4DH59 902 aa15.58■□□□□ 0.08
THBS3-208ENST00000496332 CAMTA2O94983 1202 aa15.58■□□□□ 0.08
THBS3-208ENST00000496332 CHRNA5P30532 468 aa15.58■□□□□ 0.08
THBS3-208ENST00000496332 EIF4A1P60842 406 aaKnown RBP15.58■□□□□ 0.08
THBS3-208ENST00000496332 NBPF10Q6P3W6 841 aaKnown RBP15.58■□□□□ 0.08
THBS3-208ENST00000496332 NBPF15Q8N660 670 aa15.58■□□□□ 0.08
THBS3-208ENST00000496332 RUNDC1Q96C34 613 aa15.58■□□□□ 0.08
THBS3-208ENST00000496332 PIM2Q9P1W9 311 aa15.58■□□□□ 0.08
THBS3-208ENST00000496332 RRP7AQ9Y3A4 280 aaKnown RBP15.58■□□□□ 0.08
THBS3-208ENST00000496332 GIGYF1O75420 1035 aaPredicted RBP15.57■□□□□ 0.08
THBS3-208ENST00000496332 LMOD3Q0VAK6 560 aa15.57■□□□□ 0.08
THBS3-208ENST00000496332 NEUROD2Q15784 382 aa15.57■□□□□ 0.08
THBS3-208ENST00000496332 TSPYL4Q9UJ04 414 aa15.56■□□□□ 0.08
THBS3-208ENST00000496332 DALRD3Q5D0E6 543 aaKnown RBP15.55■□□□□ 0.08
THBS3-208ENST00000496332 ARHGAP27Q6ZUM4 889 aa15.55■□□□□ 0.08
THBS3-208ENST00000496332 SETDB2Q96T68 719 aa15.55■□□□□ 0.08
THBS3-208ENST00000496332 KDM3BQ7LBC6 1761 aa15.54■□□□□ 0.08
THBS3-208ENST00000496332 CARMIL3Q8ND23 1372 aa15.54■□□□□ 0.08
THBS3-208ENST00000496332 ZNF316A6NFI3 1004 aaPredicted RBP15.54■□□□□ 0.08
THBS3-208ENST00000496332 SCN7AQ01118 1682 aa15.54■□□□□ 0.08
THBS3-208ENST00000496332 AFDNP55196 1824 aaKnown RBP15.53■□□□□ 0.08
THBS3-208ENST00000496332 PRR5LQ6MZQ0 368 aa15.53■□□□□ 0.08
THBS3-208ENST00000496332 CLEC4GQ6UXB4 293 aa15.53■□□□□ 0.08
THBS3-208ENST00000496332 C2CD5Q86YS7 1000 aa15.53■□□□□ 0.08
THBS3-208ENST00000496332 BABAM1Q9NWV8 329 aa15.53■□□□□ 0.08
THBS3-208ENST00000496332 TRIM35Q9UPQ4 493 aa15.53■□□□□ 0.08
THBS3-208ENST00000496332 ZNF652Q9Y2D9 606 aa15.53■□□□□ 0.08
THBS3-208ENST00000496332 NRXN2Q9P2S2 1712 aa15.53■□□□□ 0.08
THBS3-208ENST00000496332 ATP10DQ9P241 1426 aa15.52■□□□□ 0.08
THBS3-208ENST00000496332 CCDC24Q8N4L8 307 aa15.52■□□□□ 0.08
THBS3-208ENST00000496332 NGEFQ8N5V2 710 aa15.52■□□□□ 0.08
THBS3-208ENST00000496332 H0YIN7 160 aa15.51■□□□□ 0.07
THBS3-208ENST00000496332 NPHP1O15259 732 aa15.51■□□□□ 0.07
THBS3-208ENST00000496332 MYL6BP14649 208 aa15.51■□□□□ 0.07
THBS3-208ENST00000496332 CNBD1Q8NA66 436 aa15.51■□□□□ 0.07
THBS3-208ENST00000496332 BRIP1Q9BX63 1249 aa15.51■□□□□ 0.07
THBS3-208ENST00000496332 ADCY9O60503 1353 aa15.5■□□□□ 0.07
THBS3-208ENST00000496332 RGL2O15211 777 aa15.5■□□□□ 0.07
THBS3-208ENST00000496332 PDE6BP35913 854 aa15.5■□□□□ 0.07
THBS3-208ENST00000496332 LAS1LQ9Y4W2 734 aaKnown RBP15.5■□□□□ 0.07
THBS3-208ENST00000496332 BRCA1P38398 1863 aaKnown RBP15.5■□□□□ 0.07
THBS3-208ENST00000496332 LAMB4A4D0S4 1761 aa15.49■□□□□ 0.07
THBS3-208ENST00000496332 CHL1O00533 1208 aa15.49■□□□□ 0.07
THBS3-208ENST00000496332 ST5P78524 1137 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms