RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, human

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPM1F-208	ENST00000496143	ADAMTS8	Q9UP79	889 aa		27.98	■■■□□ 2.07
PPM1F-208	ENST00000496143	ZBTB1	Q9Y2K1	713 aa		27.98	■■■□□ 2.07
PPM1F-208	ENST00000496143	USP42	Q9H9J4	1324 aa	Known RBP	27.97	■■■□□ 2.07
PPM1F-208	ENST00000496143	MMP10	P09238	476 aa		27.97	■■■□□ 2.07
PPM1F-208	ENST00000496143	GYS1	P13807	737 aa		27.97	■■■□□ 2.07
PPM1F-208	ENST00000496143	TMPO	P42166	694 aa	Known RBP	27.97	■■■□□ 2.07
PPM1F-208	ENST00000496143	CD2AP	Q9Y5K6	639 aa		27.97	■■■□□ 2.07
PPM1F-208	ENST00000496143	C4A	P0C0L4	1744 aa		27.96	■■■□□ 2.07
PPM1F-208	ENST00000496143	ZPR1	O75312	459 aa		27.96	■■■□□ 2.07
PPM1F-208	ENST00000496143	CCDC146	Q8IYE0	955 aa		27.96	■■■□□ 2.07
PPM1F-208	ENST00000496143	COL15A1	P39059	1388 aa		27.96	■■■□□ 2.07
PPM1F-208	ENST00000496143	SNRPA1	P09661	255 aa	Known RBP	27.95	■■■□□ 2.06
PPM1F-208	ENST00000496143	CANX	P27824	592 aa	Known RBP	27.95	■■■□□ 2.06
PPM1F-208	ENST00000496143	NPM2	Q86SE8	214 aa	Known RBP	27.95	■■■□□ 2.06
PPM1F-208	ENST00000496143		A0A087WZG4	1122 aa		27.94	■■■□□ 2.06
PPM1F-208	ENST00000496143	THUMPD2	Q9BTF0	503 aa	Known RBP	27.93	■■■□□ 2.06
PPM1F-208	ENST00000496143	SRP68	Q9UHB9	627 aa	Known RBP	27.93	■■■□□ 2.06
PPM1F-208	ENST00000496143	NLGN2	Q8NFZ4	835 aa		27.91	■■■□□ 2.06
PPM1F-208	ENST00000496143	NARF	Q9UHQ1	456 aa		27.91	■■■□□ 2.06
PPM1F-208	ENST00000496143	PARP3	Q9Y6F1	533 aa		27.91	■■■□□ 2.06
PPM1F-208	ENST00000496143	IL6ST	P40189	918 aa	Predicted RBP	27.9	■■■□□ 2.06
PPM1F-208	ENST00000496143	EIF5	P55010	431 aa	Known RBP	27.9	■■■□□ 2.06
PPM1F-208	ENST00000496143	NEUROD2	Q15784	382 aa		27.9	■■■□□ 2.06
PPM1F-208	ENST00000496143	USPL1	Q5W0Q7	1092 aa		27.9	■■■□□ 2.06
PPM1F-208	ENST00000496143	MIS18A	Q9NYP9	233 aa		27.9	■■■□□ 2.06
PPM1F-208	ENST00000496143	RRP7A	Q9Y3A4	280 aa	Known RBP	27.89	■■■□□ 2.06
PPM1F-208	ENST00000496143	FKBP8	Q14318	412 aa		27.88	■■■□□ 2.05
PPM1F-208	ENST00000496143	BABAM1	Q9NWV8	329 aa		27.88	■■■□□ 2.05
PPM1F-208	ENST00000496143	USP16	Q9Y5T5	823 aa		27.88	■■■□□ 2.05
PPM1F-208	ENST00000496143	A1BG	P04217	495 aa		27.87	■■■□□ 2.05
PPM1F-208	ENST00000496143	GPR162	Q16538	588 aa		27.87	■■■□□ 2.05
PPM1F-208	ENST00000496143	ZNF330	Q9Y3S2	320 aa	Predicted RBP	27.87	■■■□□ 2.05
PPM1F-208	ENST00000496143	TSPYL4	Q9UJ04	414 aa		27.86	■■■□□ 2.05
PPM1F-208	ENST00000496143	KDM3B	Q7LBC6	1761 aa		27.86	■■■□□ 2.05
PPM1F-208	ENST00000496143	PELP1	Q8IZL8	1130 aa	Known RBP	27.85	■■■□□ 2.05
PPM1F-208	ENST00000496143	PRAMEF22	A3QJZ6	481 aa		27.84	■■■□□ 2.05
PPM1F-208	ENST00000496143	EIF4A1	P60842	406 aa	Known RBP	27.84	■■■□□ 2.05
PPM1F-208	ENST00000496143	MRS2	Q9HD23	443 aa		27.82	■■■□□ 2.04
PPM1F-208	ENST00000496143	GIGYF1	O75420	1035 aa	Predicted RBP	27.81	■■■□□ 2.04
PPM1F-208	ENST00000496143	TM4SF1	P30408	202 aa		27.81	■■■□□ 2.04
PPM1F-208	ENST00000496143	C10orf71	Q711Q0	1435 aa		27.81	■■■□□ 2.04
PPM1F-208	ENST00000496143	TRIM35	Q9UPQ4	493 aa		27.8	■■■□□ 2.04
PPM1F-208	ENST00000496143	TGFB2	P61812	414 aa		27.79	■■■□□ 2.04
PPM1F-208	ENST00000496143	DDR1	Q08345	913 aa		27.79	■■■□□ 2.04
PPM1F-208	ENST00000496143	CCDC184	Q52MB2	194 aa		27.79	■■■□□ 2.04
PPM1F-208	ENST00000496143	TBC1D2B	Q9UPU7	963 aa		27.79	■■■□□ 2.04
PPM1F-208	ENST00000496143	LAMB4	A4D0S4	1761 aa		27.78	■■■□□ 2.04
PPM1F-208	ENST00000496143	POLRMT	O00411	1230 aa	Known RBP	27.78	■■■□□ 2.04
PPM1F-208	ENST00000496143	APAF1	O14727	1248 aa		27.78	■■■□□ 2.04
PPM1F-208	ENST00000496143	GRIN3B	O60391	1043 aa		27.78	■■■□□ 2.04
PPM1F-208	ENST00000496143	DZIP3	Q86Y13	1208 aa	Known RBP	27.78	■■■□□ 2.04
PPM1F-208	ENST00000496143	BCL2L12	Q9HB09	334 aa		27.78	■■■□□ 2.04
PPM1F-208	ENST00000496143	CALD1	Q05682	793 aa	Known RBP	27.77	■■■□□ 2.04
PPM1F-208	ENST00000496143	NFIX	Q14938	502 aa		27.77	■■■□□ 2.04
PPM1F-208	ENST00000496143	PIP4K2A	P48426	406 aa	Predicted RBP	27.76	■■■□□ 2.03
PPM1F-208	ENST00000496143	SCN7A	Q01118	1682 aa		27.75	■■■□□ 2.03
PPM1F-208	ENST00000496143	LAS1L	Q9Y4W2	734 aa	Known RBP	27.75	■■■□□ 2.03
PPM1F-208	ENST00000496143	KIF13B	Q9NQT8	1826 aa		27.75	■■■□□ 2.03
PPM1F-208	ENST00000496143	NBPF26	B4DH59	902 aa		27.74	■■■□□ 2.03
PPM1F-208	ENST00000496143	CHL1	O00533	1208 aa		27.74	■■■□□ 2.03
PPM1F-208	ENST00000496143	YY1	P25490	414 aa		27.74	■■■□□ 2.03
PPM1F-208	ENST00000496143	NBPF10	Q6P3W6	841 aa	Known RBP	27.74	■■■□□ 2.03
PPM1F-208	ENST00000496143	NBPF15	Q8N660	670 aa		27.74	■■■□□ 2.03
PPM1F-208	ENST00000496143	ZNF652	Q9Y2D9	606 aa		27.74	■■■□□ 2.03
PPM1F-208	ENST00000496143	ERBB4	Q15303	1308 aa		27.73	■■■□□ 2.03
PPM1F-208	ENST00000496143	PXDNL	A1KZ92	1463 aa		27.73	■■■□□ 2.03
PPM1F-208	ENST00000496143	CAMTA2	O94983	1202 aa		27.73	■■■□□ 2.03
PPM1F-208	ENST00000496143	RGL2	O15211	777 aa		27.72	■■■□□ 2.03
PPM1F-208	ENST00000496143	SERPINB2	P05120	415 aa		27.72	■■■□□ 2.03
PPM1F-208	ENST00000496143	BICDL1	Q6ZP65	573 aa		27.72	■■■□□ 2.03
PPM1F-208	ENST00000496143	YBX3	P16989	372 aa	Known RBP eCLIP	27.71	■■■□□ 2.03
PPM1F-208	ENST00000496143	CLEC4G	Q6UXB4	293 aa		27.71	■■■□□ 2.03
PPM1F-208	ENST00000496143	CFAP44	Q96MT7	982 aa		27.71	■■■□□ 2.03
PPM1F-208	ENST00000496143	TBC1D9B	Q66K14	1250 aa		27.7	■■■□□ 2.02
PPM1F-208	ENST00000496143	CARMIL3	Q8ND23	1372 aa		27.7	■■■□□ 2.02
PPM1F-208	ENST00000496143	SETDB2	Q96T68	719 aa		27.69	■■■□□ 2.02
PPM1F-208	ENST00000496143		A0A0G2JLW4	131 aa		27.68	■■■□□ 2.02
PPM1F-208	ENST00000496143	BCOR	Q6W2J9	1755 aa		27.68	■■■□□ 2.02
PPM1F-208	ENST00000496143	DPEP1	P16444	411 aa		27.67	■■■□□ 2.02
PPM1F-208	ENST00000496143	GNAI1	P63096	354 aa		27.67	■■■□□ 2.02
PPM1F-208	ENST00000496143	IFT57	Q9NWB7	429 aa		27.67	■■■□□ 2.02
PPM1F-208	ENST00000496143	MYL6B	P14649	208 aa		27.66	■■■□□ 2.02
PPM1F-208	ENST00000496143	EIF2S2	P20042	333 aa	Known RBP	27.66	■■■□□ 2.02
PPM1F-208	ENST00000496143	KIF6	Q6ZMV9	814 aa		27.66	■■■□□ 2.02
PPM1F-208	ENST00000496143	NRXN2	Q9P2S2	1712 aa		27.65	■■■□□ 2.02
PPM1F-208	ENST00000496143	NPHP1	O15259	732 aa		27.65	■■■□□ 2.02
PPM1F-208	ENST00000496143	WWC3	Q9ULE0	1092 aa		27.65	■■■□□ 2.02
PPM1F-208	ENST00000496143	HOXB7	P09629	217 aa		27.64	■■■□□ 2.02
PPM1F-208	ENST00000496143	NGEF	Q8N5V2	710 aa		27.64	■■■□□ 2.02
PPM1F-208	ENST00000496143	KIAA1551	Q9HCM1	1747 aa		27.64	■■■□□ 2.01
PPM1F-208	ENST00000496143	CCDC27	Q2M243	656 aa		27.63	■■■□□ 2.01
PPM1F-208	ENST00000496143	PIM2	Q9P1W9	311 aa		27.63	■■■□□ 2.01
PPM1F-208	ENST00000496143	N4BP2	Q86UW6	1770 aa	Predicted RBP	27.63	■■■□□ 2.01
PPM1F-208	ENST00000496143	AFDN	P55196	1824 aa	Known RBP	27.62	■■■□□ 2.01
PPM1F-208	ENST00000496143	ERVV-1	B6SEH8	477 aa		27.62	■■■□□ 2.01
PPM1F-208	ENST00000496143	ZNF853	P0CG23	659 aa		27.62	■■■□□ 2.01
PPM1F-208	ENST00000496143	NCBP3	Q53F19	620 aa	Known RBP	27.62	■■■□□ 2.01
PPM1F-208	ENST00000496143	MBIP	Q9NS73	344 aa		27.62	■■■□□ 2.01
PPM1F-208	ENST00000496143	BCS1L	Q9Y276	419 aa		27.62	■■■□□ 2.01
PPM1F-208	ENST00000496143	CHD4	Q14839	1912 aa		27.61	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms