RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SBF1O95248 1867 aa13.7□□□□□ -0.22
SMARCAL1-213ENST00000496037 RFC4P35249 363 aa13.69□□□□□ -0.22
SMARCAL1-213ENST00000496037 ITPK1Q13572 414 aa13.69□□□□□ -0.22
SMARCAL1-213ENST00000496037 WBP1LQ9NX94 342 aa13.69□□□□□ -0.22
SMARCAL1-213ENST00000496037 RTL1A6NKG5 1358 aa13.69□□□□□ -0.22
SMARCAL1-213ENST00000496037 MAP2P11137 1827 aaKnown RBP13.69□□□□□ -0.22
SMARCAL1-213ENST00000496037 TIAM2Q8IVF5 1701 aa13.68□□□□□ -0.22
SMARCAL1-213ENST00000496037 HSPA8P11142 646 aaKnown RBP13.68□□□□□ -0.22
SMARCAL1-213ENST00000496037 GYS1P13807 737 aa13.68□□□□□ -0.22
SMARCAL1-213ENST00000496037 DPY19L2Q6NUT2 758 aa13.68□□□□□ -0.22
SMARCAL1-213ENST00000496037 CFAP44Q96MT7 982 aa13.68□□□□□ -0.22
SMARCAL1-213ENST00000496037 ITGB4P16144 1822 aa13.68□□□□□ -0.22
SMARCAL1-213ENST00000496037 CYP27B1O15528 508 aa13.67□□□□□ -0.22
SMARCAL1-213ENST00000496037 CHRNA5P30532 468 aa13.67□□□□□ -0.22
SMARCAL1-213ENST00000496037 VEGFBP49765 207 aa13.67□□□□□ -0.22
SMARCAL1-213ENST00000496037 COG3Q96JB2 828 aa13.67□□□□□ -0.22
SMARCAL1-213ENST00000496037 TMOD3Q9NYL9 352 aa13.67□□□□□ -0.22
SMARCAL1-213ENST00000496037 ARHGEF1Q92888 912 aaKnown RBP13.66□□□□□ -0.22
SMARCAL1-213ENST00000496037 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
SMARCAL1-213ENST00000496037 A0A1W2PP64 1363 aa13.64□□□□□ -0.23
SMARCAL1-213ENST00000496037 TMEM88BA6NKF7 163 aa13.64□□□□□ -0.23
SMARCAL1-213ENST00000496037 POTECB2RU33 542 aa13.64□□□□□ -0.23
SMARCAL1-213ENST00000496037 MAP2K1Q02750 393 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-213ENST00000496037 ASAP1Q9ULH1 1129 aa13.64□□□□□ -0.23
SMARCAL1-213ENST00000496037 TNRC18O15417 2968 aaPredicted RBP13.63□□□□□ -0.23
SMARCAL1-213ENST00000496037 ROCK2O75116 1388 aaKnown RBP13.62□□□□□ -0.23
SMARCAL1-213ENST00000496037 PASKQ96RG2 1323 aa13.62□□□□□ -0.23
SMARCAL1-213ENST00000496037 CNTNAP4Q9C0A0 1308 aa13.62□□□□□ -0.23
SMARCAL1-213ENST00000496037 CLCN6P51797 869 aa13.61□□□□□ -0.23
SMARCAL1-213ENST00000496037 NKX1-1Q15270 411 aaPredicted RBP13.61□□□□□ -0.23
SMARCAL1-213ENST00000496037 RC3H1Q5TC82 1133 aaKnown RBP13.61□□□□□ -0.23
SMARCAL1-213ENST00000496037 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
SMARCAL1-213ENST00000496037 BEGAINQ9BUH8 593 aa13.61□□□□□ -0.23
SMARCAL1-213ENST00000496037 SLC12A5Q9H2X9 1139 aa13.61□□□□□ -0.23
SMARCAL1-213ENST00000496037 KDRP35968 1356 aa13.6□□□□□ -0.23
SMARCAL1-213ENST00000496037 VIRMAQ69YN4 1812 aaKnown RBP13.6□□□□□ -0.23
SMARCAL1-213ENST00000496037 RPS6KA4O75676 772 aa13.6□□□□□ -0.23
SMARCAL1-213ENST00000496037 POTEIP0CG38 1075 aa13.6□□□□□ -0.23
SMARCAL1-213ENST00000496037 POTEJP0CG39 1038 aa13.6□□□□□ -0.23
SMARCAL1-213ENST00000496037 FBLN1P23142 703 aa13.6□□□□□ -0.23
SMARCAL1-213ENST00000496037 DDR1Q08345 913 aa13.6□□□□□ -0.23
SMARCAL1-213ENST00000496037 RRS1Q15050 365 aaKnown RBP13.6□□□□□ -0.23
SMARCAL1-213ENST00000496037 LDHDQ86WU2 507 aa13.6□□□□□ -0.23
SMARCAL1-213ENST00000496037 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.6□□□□□ -0.23
SMARCAL1-213ENST00000496037 SPG7Q9UQ90 795 aa13.6□□□□□ -0.23
SMARCAL1-213ENST00000496037 ERFEQ4G0M1 354 aa13.59□□□□□ -0.23
SMARCAL1-213ENST00000496037 TSPYL2Q9H2G4 693 aaPredicted RBP13.59□□□□□ -0.23
SMARCAL1-213ENST00000496037 ATG3Q9NT62 314 aa13.59□□□□□ -0.23
SMARCAL1-213ENST00000496037 IQCA1LA6NCM1 817 aa13.58□□□□□ -0.24
SMARCAL1-213ENST00000496037 DEFB115Q30KQ5 88 aa13.58□□□□□ -0.24
SMARCAL1-213ENST00000496037 TTLL6Q8N841 843 aa13.58□□□□□ -0.24
SMARCAL1-213ENST00000496037 WDR33Q9C0J8 1336 aaKnown RBP13.58□□□□□ -0.24
SMARCAL1-213ENST00000496037 RASSF10A6NK89 507 aa13.57□□□□□ -0.24
SMARCAL1-213ENST00000496037 NFKBIEO00221 500 aa13.57□□□□□ -0.24
SMARCAL1-213ENST00000496037 RASEFQ8IZ41 740 aa13.57□□□□□ -0.24
SMARCAL1-213ENST00000496037 USP42Q9H9J4 1324 aaKnown RBP13.57□□□□□ -0.24
SMARCAL1-213ENST00000496037 INSRP06213 1382 aa13.57□□□□□ -0.24
SMARCAL1-213ENST00000496037 POLRMTO00411 1230 aaKnown RBP13.56□□□□□ -0.24
SMARCAL1-213ENST00000496037 GABBR2O75899 941 aa13.56□□□□□ -0.24
SMARCAL1-213ENST00000496037 NUBP1P53384 320 aa13.56□□□□□ -0.24
SMARCAL1-213ENST00000496037 SRP68Q9UHB9 627 aaKnown RBP13.56□□□□□ -0.24
SMARCAL1-213ENST00000496037 ZNF831Q5JPB2 1677 aa13.56□□□□□ -0.24
SMARCAL1-213ENST00000496037 COL5A3P25940 1745 aaPredicted RBP13.56□□□□□ -0.24
SMARCAL1-213ENST00000496037 HSP90AB2PQ58FF8 381 aa13.55□□□□□ -0.24
SMARCAL1-213ENST00000496037 ABT1Q9ULW3 272 aaKnown RBP13.55□□□□□ -0.24
SMARCAL1-213ENST00000496037 FLT4P35916 1363 aa13.55□□□□□ -0.24
SMARCAL1-213ENST00000496037 DDNO94850 711 aaPredicted RBP13.54□□□□□ -0.24
SMARCAL1-213ENST00000496037 IFNL2Q8IZJ0 200 aa13.54□□□□□ -0.24
SMARCAL1-213ENST00000496037 SLC4A9Q96Q91 983 aa13.54□□□□□ -0.24
SMARCAL1-213ENST00000496037 CCDC88AQ3V6T2 1871 aa13.53□□□□□ -0.24
SMARCAL1-213ENST00000496037 PRPF38BQ5VTL8 546 aaKnown RBP13.53□□□□□ -0.24
SMARCAL1-213ENST00000496037 PAXIP1Q6ZW49 1069 aaPredicted RBP13.53□□□□□ -0.24
SMARCAL1-213ENST00000496037 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
SMARCAL1-213ENST00000496037 MCOLN1Q9GZU1 580 aa13.53□□□□□ -0.24
SMARCAL1-213ENST00000496037 PDE4DIPQ5VU43 2346 aa13.53□□□□□ -0.24
SMARCAL1-213ENST00000496037 DLEC1Q9Y238 1755 aa13.53□□□□□ -0.24
SMARCAL1-213ENST00000496037 ITGBL1O95965 494 aaPredicted RBP13.52□□□□□ -0.25
SMARCAL1-213ENST00000496037 PHKG2P15735 406 aa13.52□□□□□ -0.25
SMARCAL1-213ENST00000496037 EAPPQ56P03 285 aaPredicted RBP13.52□□□□□ -0.25
SMARCAL1-213ENST00000496037 C2CD5Q86YS7 1000 aa13.52□□□□□ -0.25
SMARCAL1-213ENST00000496037 TAF1DQ9H5J8 278 aaPredicted RBP13.52□□□□□ -0.25
SMARCAL1-213ENST00000496037 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
SMARCAL1-213ENST00000496037 H0YIN7 160 aa13.51□□□□□ -0.25
SMARCAL1-213ENST00000496037 ZPR1O75312 459 aa13.51□□□□□ -0.25
SMARCAL1-213ENST00000496037 TM4SF1P30408 202 aa13.51□□□□□ -0.25
SMARCAL1-213ENST00000496037 ECE1P42892 770 aa13.51□□□□□ -0.25
SMARCAL1-213ENST00000496037 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
SMARCAL1-213ENST00000496037 TAOK3Q9H2K8 898 aa13.51□□□□□ -0.25
SMARCAL1-213ENST00000496037 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMARCAL1-213ENST00000496037 THSD7BQ9C0I4 1608 aa13.5□□□□□ -0.25
SMARCAL1-213ENST00000496037 CRKLP46109 303 aaKnown RBP13.5□□□□□ -0.25
SMARCAL1-213ENST00000496037 GRM1Q13255 1194 aa13.5□□□□□ -0.25
SMARCAL1-213ENST00000496037 PHF12Q96QT6 1004 aa13.5□□□□□ -0.25
SMARCAL1-213ENST00000496037 L3MBTL2Q969R5 705 aa13.49□□□□□ -0.25
SMARCAL1-213ENST00000496037 L3MBTL3Q96JM7 780 aaPredicted RBP13.49□□□□□ -0.25
SMARCAL1-213ENST00000496037 CAPNS2Q96L46 248 aa13.49□□□□□ -0.25
SMARCAL1-213ENST00000496037 TSKSQ9UJT2 592 aa13.49□□□□□ -0.25
SMARCAL1-213ENST00000496037 DICER1Q9UPY3 1922 aaKnown RBP13.49□□□□□ -0.25
SMARCAL1-213ENST00000496037 NCAPD2Q15021 1401 aa13.48□□□□□ -0.25
SMARCAL1-213ENST00000496037 SCN4AP35499 1836 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms