RNA–Protein interactions for RNA: ENST00000495888.1

SPOCK2-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, humanhuman

TSL 1 (best)

Gene SPOCK2, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK2-208ENST00000495888 TWISTNBQ3B726 338 aaPredicted RBP26.7■■□□□ 1.86
SPOCK2-208ENST00000495888 KRT24Q2M2I5 525 aa26.69■■□□□ 1.86
SPOCK2-208ENST00000495888 TTC5Q8N0Z6 440 aa26.69■■□□□ 1.86
SPOCK2-208ENST00000495888 KCNQ4P56696 695 aa26.68■■□□□ 1.86
SPOCK2-208ENST00000495888 UBR2Q8IWV8 1755 aa26.68■■□□□ 1.86
SPOCK2-208ENST00000495888 KCPQ6ZWJ8 1503 aa26.67■■□□□ 1.86
SPOCK2-208ENST00000495888 FMNL2Q96PY5 1086 aa26.67■■□□□ 1.86
SPOCK2-208ENST00000495888 ATG3Q9NT62 314 aa26.67■■□□□ 1.86
SPOCK2-208ENST00000495888 RARSP54136 660 aaKnown RBP26.66■■□□□ 1.86
SPOCK2-208ENST00000495888 ZNF496Q96IT1 587 aaPredicted RBP26.66■■□□□ 1.86
SPOCK2-208ENST00000495888 GIGYF1O75420 1035 aaPredicted RBP26.65■■□□□ 1.86
SPOCK2-208ENST00000495888 CHMP4AQ9BY43 222 aa26.65■■□□□ 1.86
SPOCK2-208ENST00000495888 ASAP1Q9ULH1 1129 aa26.65■■□□□ 1.86
SPOCK2-208ENST00000495888 ELL2O00472 640 aaPredicted RBP26.64■■□□□ 1.86
SPOCK2-208ENST00000495888 ALDH1L2Q3SY69 923 aa26.64■■□□□ 1.86
SPOCK2-208ENST00000495888 TFCP2L1Q9NZI6 479 aa26.64■■□□□ 1.86
SPOCK2-208ENST00000495888 CCNL1Q9UK58 526 aaPredicted RBP26.63■■□□□ 1.85
SPOCK2-208ENST00000495888 RNF123Q5XPI4 1314 aa26.63■■□□□ 1.85
SPOCK2-208ENST00000495888 SMARCC1Q92922 1105 aaPredicted RBP26.62■■□□□ 1.85
SPOCK2-208ENST00000495888 C5P01031 1676 aa26.61■■□□□ 1.85
SPOCK2-208ENST00000495888 SNRPA1P09661 255 aaKnown RBP26.61■■□□□ 1.85
SPOCK2-208ENST00000495888 BRPF1P55201 1214 aaPredicted RBP26.61■■□□□ 1.85
SPOCK2-208ENST00000495888 VSIG10Q8N0Z9 540 aa26.61■■□□□ 1.85
SPOCK2-208ENST00000495888 SSH1Q8WYL5 1049 aa26.6■■□□□ 1.85
SPOCK2-208ENST00000495888 POLD1P28340 1107 aa26.59■■□□□ 1.85
SPOCK2-208ENST00000495888 CHD4Q14839 1912 aa26.58■■□□□ 1.85
SPOCK2-208ENST00000495888 GOLGB1Q14789 3259 aaKnown RBP26.57■■□□□ 1.84
SPOCK2-208ENST00000495888 CCDC30Q5VVM6 783 aa26.57■■□□□ 1.84
SPOCK2-208ENST00000495888 ZNF784Q8NCA9 323 aaPredicted RBP26.57■■□□□ 1.84
SPOCK2-208ENST00000495888 SUPT16HQ9Y5B9 1047 aaKnown RBP26.57■■□□□ 1.84
SPOCK2-208ENST00000495888 PTCD1O75127 700 aaKnown RBP26.56■■□□□ 1.84
SPOCK2-208ENST00000495888 HDGFL1Q5TGJ6 251 aa26.56■■□□□ 1.84
SPOCK2-208ENST00000495888 PALLDQ8WX93 1383 aa26.56■■□□□ 1.84
SPOCK2-208ENST00000495888 TAF1LQ8IZX4 1826 aa26.55■■□□□ 1.84
SPOCK2-208ENST00000495888 BCAR3O75815 825 aa26.55■■□□□ 1.84
SPOCK2-208ENST00000495888 TEX13AQ9BXU3 409 aaPredicted RBP26.55■■□□□ 1.84
SPOCK2-208ENST00000495888 SMC4Q9NTJ3 1288 aa26.55■■□□□ 1.84
SPOCK2-208ENST00000495888 COL23A1Q86Y22 540 aaPredicted RBP26.54■■□□□ 1.84
SPOCK2-208ENST00000495888 MRPL50Q8N5N7 158 aaKnown RBP26.54■■□□□ 1.84
SPOCK2-208ENST00000495888 CICQ96RK0 1608 aaPredicted RBP26.54■■□□□ 1.84
SPOCK2-208ENST00000495888 PRAMEF22A3QJZ6 481 aa26.53■■□□□ 1.84
SPOCK2-208ENST00000495888 ZNF831Q5JPB2 1677 aa26.53■■□□□ 1.84
SPOCK2-208ENST00000495888 LAMB4A4D0S4 1761 aa26.52■■□□□ 1.84
SPOCK2-208ENST00000495888 RRP1P56182 461 aaKnown RBP26.52■■□□□ 1.84
SPOCK2-208ENST00000495888 SLC4A9Q96Q91 983 aa26.52■■□□□ 1.84
SPOCK2-208ENST00000495888 STK31Q9BXU1 1019 aa26.52■■□□□ 1.84
SPOCK2-208ENST00000495888 ERBB4Q15303 1308 aa26.51■■□□□ 1.83
SPOCK2-208ENST00000495888 KIF16BQ96L93 1317 aa26.51■■□□□ 1.83
SPOCK2-208ENST00000495888 LOC102724428A0A0B4J2F2 783 aa26.51■■□□□ 1.83
SPOCK2-208ENST00000495888 SIK1P57059 783 aa26.51■■□□□ 1.83
SPOCK2-208ENST00000495888 RBM42Q9BTD8 480 aaKnown RBP26.51■■□□□ 1.83
SPOCK2-208ENST00000495888 BCL2L13Q9BXK5 485 aa26.51■■□□□ 1.83
SPOCK2-208ENST00000495888 EIF2S2P20042 333 aaKnown RBP26.5■■□□□ 1.83
SPOCK2-208ENST00000495888 KLHL34Q8N239 644 aa26.5■■□□□ 1.83
SPOCK2-208ENST00000495888 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.5■■□□□ 1.83
SPOCK2-208ENST00000495888 NLGN2Q8NFZ4 835 aa26.5■■□□□ 1.83
SPOCK2-208ENST00000495888 USP16Q9Y5T5 823 aa26.5■■□□□ 1.83
SPOCK2-208ENST00000495888 C4BP0C0L5 1744 aa26.5■■□□□ 1.83
SPOCK2-208ENST00000495888 DBF4Q9UBU7 674 aaPredicted RBP26.49■■□□□ 1.83
SPOCK2-208ENST00000495888 GPR162Q16538 588 aa26.48■■□□□ 1.83
SPOCK2-208ENST00000495888 TCERG1O14776 1098 aaKnown RBP26.47■■□□□ 1.83
SPOCK2-208ENST00000495888 STARD3NLO95772 234 aa26.47■■□□□ 1.83
SPOCK2-208ENST00000495888 SLC4A2P04920 1241 aa26.47■■□□□ 1.83
SPOCK2-208ENST00000495888 HMGB2P26583 209 aaKnown RBP26.47■■□□□ 1.83
SPOCK2-208ENST00000495888 DNAJC10Q8IXB1 793 aa26.47■■□□□ 1.83
SPOCK2-208ENST00000495888 ARHGAP45Q92619 1136 aa26.47■■□□□ 1.83
SPOCK2-208ENST00000495888 DDX21Q9NR30 783 aaKnown RBP eCLIP26.47■■□□□ 1.83
SPOCK2-208ENST00000495888 CHPF2Q9P2E5 772 aa26.47■■□□□ 1.83
SPOCK2-208ENST00000495888 CACNA1FO60840 1977 aa26.47■■□□□ 1.83
SPOCK2-208ENST00000495888 TJP1Q07157 1748 aa26.47■■□□□ 1.83
SPOCK2-208ENST00000495888 NECTIN2Q92692 538 aa26.46■■□□□ 1.83
SPOCK2-208ENST00000495888 IPO8O15397 1037 aaKnown RBP26.45■■□□□ 1.82
SPOCK2-208ENST00000495888 MSH5O43196 834 aa26.45■■□□□ 1.82
SPOCK2-208ENST00000495888 PDIA6Q15084 440 aa26.45■■□□□ 1.82
SPOCK2-208ENST00000495888 FLAD1Q8NFF5 587 aa26.45■■□□□ 1.82
SPOCK2-208ENST00000495888 CYP19A1P11511 503 aaPredicted RBP26.44■■□□□ 1.82
SPOCK2-208ENST00000495888 ATP6V1AP38606 617 aa26.44■■□□□ 1.82
SPOCK2-208ENST00000495888 HYPKQ9NX55 129 aa26.44■■□□□ 1.82
SPOCK2-208ENST00000495888 NOB1Q9ULX3 412 aaKnown RBP26.44■■□□□ 1.82
SPOCK2-208ENST00000495888 UBR3Q6ZT12 1888 aa26.44■■□□□ 1.82
SPOCK2-208ENST00000495888 PTPRCP08575 1304 aa26.43■■□□□ 1.82
SPOCK2-208ENST00000495888 ZKSCAN2Q63HK3 967 aa26.43■■□□□ 1.82
SPOCK2-208ENST00000495888 MSL1Q68DK7 614 aa26.43■■□□□ 1.82
SPOCK2-208ENST00000495888 ITPK1Q13572 414 aa26.42■■□□□ 1.82
SPOCK2-208ENST00000495888 PLIN1O60240 522 aa26.41■■□□□ 1.82
SPOCK2-208ENST00000495888 PROSER3Q2NL68 480 aa26.41■■□□□ 1.82
SPOCK2-208ENST00000495888 ATF7IPQ6VMQ6 1270 aa26.41■■□□□ 1.82
SPOCK2-208ENST00000495888 LRP10Q7Z4F1 713 aa26.41■■□□□ 1.82
SPOCK2-208ENST00000495888 AMIGO3Q86WK7 504 aa26.41■■□□□ 1.82
SPOCK2-208ENST00000495888 FRAT1Q92837 279 aaPredicted RBP26.41■■□□□ 1.82
SPOCK2-208ENST00000495888 CANXP27824 592 aaKnown RBP26.4■■□□□ 1.82
SPOCK2-208ENST00000495888 FLIIQ13045 1269 aa26.4■■□□□ 1.82
SPOCK2-208ENST00000495888 PDE3AQ14432 1141 aa26.4■■□□□ 1.82
SPOCK2-208ENST00000495888 G2E3Q7L622 706 aa26.4■■□□□ 1.82
SPOCK2-208ENST00000495888 NBPF26B4DH59 902 aa26.39■■□□□ 1.82
SPOCK2-208ENST00000495888 A1BGP04217 495 aa26.39■■□□□ 1.82
SPOCK2-208ENST00000495888 MS4A1P11836 297 aa26.39■■□□□ 1.82
SPOCK2-208ENST00000495888 NBPF10Q6P3W6 841 aaKnown RBP26.39■■□□□ 1.82
SPOCK2-208ENST00000495888 NBPF15Q8N660 670 aa26.39■■□□□ 1.82
SPOCK2-208ENST00000495888 API5Q9BZZ5 524 aaKnown RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms