RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 UPF1Q92900 1129 aaKnown RBP eCLIP25.06■■□□□ 1.6
ATG3-208ENST00000495756 COL5A3P25940 1745 aaPredicted RBP25.06■■□□□ 1.6
ATG3-208ENST00000495756 EN1Q05925 392 aaPredicted RBP25.05■■□□□ 1.6
ATG3-208ENST00000495756 CCDC30Q5VVM6 783 aa25.05■■□□□ 1.6
ATG3-208ENST00000495756 CAMKK2Q96RR4 588 aa25.05■■□□□ 1.6
ATG3-208ENST00000495756 TAF1LQ8IZX4 1826 aa25.04■■□□□ 1.6
ATG3-208ENST00000495756 LINC00116Q8NCU8 138 aa25.04■■□□□ 1.6
ATG3-208ENST00000495756 RARSP54136 660 aaKnown RBP25.03■■□□□ 1.6
ATG3-208ENST00000495756 DEFB132Q7Z7B7 95 aa25.03■■□□□ 1.6
ATG3-208ENST00000495756 TCERG1O14776 1098 aaKnown RBP25.02■■□□□ 1.6
ATG3-208ENST00000495756 A1BGP04217 495 aa25.02■■□□□ 1.6
ATG3-208ENST00000495756 CENPBP07199 599 aaPredicted RBP25.02■■□□□ 1.6
ATG3-208ENST00000495756 EZH2Q15910 746 aaKnown RBP25.02■■□□□ 1.6
ATG3-208ENST00000495756 ALDH1L2Q3SY69 923 aa25.02■■□□□ 1.6
ATG3-208ENST00000495756 SSH1Q8WYL5 1049 aa25.02■■□□□ 1.6
ATG3-208ENST00000495756 CHPF2Q9P2E5 772 aa25.02■■□□□ 1.6
ATG3-208ENST00000495756 RCAN3Q9UKA8 241 aa25.02■■□□□ 1.6
ATG3-208ENST00000495756 ERBB4Q15303 1308 aa25.01■■□□□ 1.59
ATG3-208ENST00000495756 STK31Q9BXU1 1019 aa25.01■■□□□ 1.59
ATG3-208ENST00000495756 DBF4Q9UBU7 674 aaPredicted RBP25.01■■□□□ 1.59
ATG3-208ENST00000495756 HMGB2P26583 209 aaKnown RBP25■■□□□ 1.59
ATG3-208ENST00000495756 CRKLP46109 303 aaKnown RBP25■■□□□ 1.59
ATG3-208ENST00000495756 PDIA6Q15084 440 aa25■■□□□ 1.59
ATG3-208ENST00000495756 CCDC87Q9NVE4 849 aa25■■□□□ 1.59
ATG3-208ENST00000495756 CNTNAP4Q9C0A0 1308 aa25■■□□□ 1.59
ATG3-208ENST00000495756 RREB1Q92766 1687 aa24.99■■□□□ 1.59
ATG3-208ENST00000495756 NBPF26B4DH59 902 aa24.99■■□□□ 1.59
ATG3-208ENST00000495756 NBPF14Q5TI25 921 aa24.99■■□□□ 1.59
ATG3-208ENST00000495756 NBPF10Q6P3W6 841 aaKnown RBP24.99■■□□□ 1.59
ATG3-208ENST00000495756 INTS5Q6P9B9 1019 aaKnown RBP24.99■■□□□ 1.59
ATG3-208ENST00000495756 NBPF15Q8N660 670 aa24.99■■□□□ 1.59
ATG3-208ENST00000495756 BCL2L13Q9BXK5 485 aa24.99■■□□□ 1.59
ATG3-208ENST00000495756 DDX21Q9NR30 783 aaKnown RBP eCLIP24.99■■□□□ 1.59
ATG3-208ENST00000495756 SMC4Q9NTJ3 1288 aa24.99■■□□□ 1.59
ATG3-208ENST00000495756 MYH14Q7Z406 1995 aaKnown RBP24.99■■□□□ 1.59
ATG3-208ENST00000495756 C4BP0C0L5 1744 aa24.99■■□□□ 1.59
ATG3-208ENST00000495756 SLC4A2P04920 1241 aa24.98■■□□□ 1.59
ATG3-208ENST00000495756 PIP4K2AP48426 406 aaPredicted RBP24.98■■□□□ 1.59
ATG3-208ENST00000495756 PROSER3Q2NL68 480 aa24.98■■□□□ 1.59
ATG3-208ENST00000495756 RC3H1Q5TC82 1133 aaKnown RBP24.97■■□□□ 1.59
ATG3-208ENST00000495756 ZBTB1Q9Y2K1 713 aa24.97■■□□□ 1.59
ATG3-208ENST00000495756 CACNA1FO60840 1977 aa24.97■■□□□ 1.59
ATG3-208ENST00000495756 BCAR3O75815 825 aa24.96■■□□□ 1.59
ATG3-208ENST00000495756 ANXA1P04083 346 aa24.96■■□□□ 1.59
ATG3-208ENST00000495756 MRPL50Q8N5N7 158 aaKnown RBP24.96■■□□□ 1.59
ATG3-208ENST00000495756 MYL6BP14649 208 aa24.96■■□□□ 1.59
ATG3-208ENST00000495756 CANXP27824 592 aaKnown RBP24.96■■□□□ 1.59
ATG3-208ENST00000495756 LRP10Q7Z4F1 713 aa24.95■■□□□ 1.58
ATG3-208ENST00000495756 HYPKQ9NX55 129 aa24.95■■□□□ 1.58
ATG3-208ENST00000495756 BRPF1P55201 1214 aaPredicted RBP24.94■■□□□ 1.58
ATG3-208ENST00000495756 NUP188Q5SRE5 1749 aa24.93■■□□□ 1.58
ATG3-208ENST00000495756 IL6STP40189 918 aaPredicted RBP24.93■■□□□ 1.58
ATG3-208ENST00000495756 G2E3Q7L622 706 aa24.92■■□□□ 1.58
ATG3-208ENST00000495756 AK7Q96M32 723 aa24.92■■□□□ 1.58
ATG3-208ENST00000495756 GNPATO15228 680 aa24.91■■□□□ 1.58
ATG3-208ENST00000495756 EIF5P55010 431 aaKnown RBP24.91■■□□□ 1.58
ATG3-208ENST00000495756 PHAXQ9H814 394 aaKnown RBP24.91■■□□□ 1.58
ATG3-208ENST00000495756 RPS6KA4O75676 772 aa24.9■■□□□ 1.58
ATG3-208ENST00000495756 AKT1S1Q96B36 256 aa24.9■■□□□ 1.58
ATG3-208ENST00000495756 ZNF330Q9Y3S2 320 aaPredicted RBP24.89■■□□□ 1.58
ATG3-208ENST00000495756 KIF16BQ96L93 1317 aa24.89■■□□□ 1.57
ATG3-208ENST00000495756 FLIIQ13045 1269 aa24.89■■□□□ 1.57
ATG3-208ENST00000495756 ZNF827Q17R98 1081 aa24.89■■□□□ 1.57
ATG3-208ENST00000495756 XAGE3Q8WTP9 111 aa24.89■■□□□ 1.57
ATG3-208ENST00000495756 RTCBQ9Y3I0 505 aaKnown RBP24.89■■□□□ 1.57
ATG3-208ENST00000495756 UBR3Q6ZT12 1888 aa24.88■■□□□ 1.57
ATG3-208ENST00000495756 COPS6Q7L5N1 327 aa24.88■■□□□ 1.57
ATG3-208ENST00000495756 NOB1Q9ULX3 412 aaKnown RBP24.88■■□□□ 1.57
ATG3-208ENST00000495756 AIMP1Q12904 312 aaKnown RBP24.87■■□□□ 1.57
ATG3-208ENST00000495756 NPM2Q86SE8 214 aaKnown RBP24.87■■□□□ 1.57
ATG3-208ENST00000495756 AMIGO3Q86WK7 504 aa24.87■■□□□ 1.57
ATG3-208ENST00000495756 COL15A1P39059 1388 aa24.86■■□□□ 1.57
ATG3-208ENST00000495756 FRAT1Q92837 279 aaPredicted RBP24.86■■□□□ 1.57
ATG3-208ENST00000495756 ANO8Q9HCE9 1232 aaPredicted RBP24.86■■□□□ 1.57
ATG3-208ENST00000495756 PTPRCP08575 1304 aa24.85■■□□□ 1.57
ATG3-208ENST00000495756 TTLL7Q6ZT98 887 aa24.85■■□□□ 1.57
ATG3-208ENST00000495756 SMIM5Q71RC9 77 aa24.85■■□□□ 1.57
ATG3-208ENST00000495756 FKBP5Q13451 457 aaPredicted RBP24.84■■□□□ 1.57
ATG3-208ENST00000495756 STK32BQ9NY57 414 aa24.84■■□□□ 1.57
ATG3-208ENST00000495756 TFCP2L1Q9NZI6 479 aa24.84■■□□□ 1.57
ATG3-208ENST00000495756 A0A087WZG4 1122 aa24.83■■□□□ 1.57
ATG3-208ENST00000495756 IPO8O15397 1037 aaKnown RBP24.83■■□□□ 1.57
ATG3-208ENST00000495756 ADRA2BP18089 450 aa24.83■■□□□ 1.57
ATG3-208ENST00000495756 SSFA2P28290 1259 aa24.83■■□□□ 1.57
ATG3-208ENST00000495756 SLC15A2Q16348 729 aa24.83■■□□□ 1.57
ATG3-208ENST00000495756 ARHGAP45Q92619 1136 aa24.83■■□□□ 1.57
ATG3-208ENST00000495756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.83■■□□□ 1.56
ATG3-208ENST00000495756 PHF14O94880 888 aa24.83■■□□□ 1.56
ATG3-208ENST00000495756 DDX58O95786 925 aaKnown RBP24.83■■□□□ 1.56
ATG3-208ENST00000495756 TRAPPC3LQ5T215 181 aa24.83■■□□□ 1.56
ATG3-208ENST00000495756 ZKSCAN2Q63HK3 967 aa24.83■■□□□ 1.56
ATG3-208ENST00000495756 KIF6Q6ZMV9 814 aa24.83■■□□□ 1.56
ATG3-208ENST00000495756 ARXQ96QS3 562 aa24.83■■□□□ 1.56
ATG3-208ENST00000495756 SUPT16HQ9Y5B9 1047 aaKnown RBP24.83■■□□□ 1.56
ATG3-208ENST00000495756 TUBGCP6Q96RT7 1819 aa24.82■■□□□ 1.56
ATG3-208ENST00000495756 DZIP3Q86Y13 1208 aaKnown RBP24.82■■□□□ 1.56
ATG3-208ENST00000495756 TBC1D2BQ9UPU7 963 aa24.82■■□□□ 1.56
ATG3-208ENST00000495756 RRP1P56182 461 aaKnown RBP24.81■■□□□ 1.56
ATG3-208ENST00000495756 ATF7IPQ6VMQ6 1270 aa24.81■■□□□ 1.56
ATG3-208ENST00000495756 ANKRD13DQ6ZTN6 518 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms