RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 TEAD4Q15561 434 aa10.47□□□□□ -0.73
NCKAP1-208ENST00000495619 CCDC82Q8N4S0 544 aa10.47□□□□□ -0.73
NCKAP1-208ENST00000495619 TSEN2Q8NCE0 465 aaKnown RBP10.47□□□□□ -0.73
NCKAP1-208ENST00000495619 NUCKS1Q9H1E3 243 aaKnown RBP10.47□□□□□ -0.73
NCKAP1-208ENST00000495619 GPAMQ9HCL2 828 aa10.47□□□□□ -0.73
NCKAP1-208ENST00000495619 SERTM1A2A2V5 107 aa10.46□□□□□ -0.73
NCKAP1-208ENST00000495619 EPHA4P54764 986 aa10.46□□□□□ -0.73
NCKAP1-208ENST00000495619 PSMA6P60900 246 aaKnown RBP10.46□□□□□ -0.73
NCKAP1-208ENST00000495619 FOXK2Q01167 660 aa10.46□□□□□ -0.73
NCKAP1-208ENST00000495619 ZDHHC3Q9NYG2 299 aa10.46□□□□□ -0.73
NCKAP1-208ENST00000495619 NOVA2Q9UNW9 492 aaKnown RBP10.46□□□□□ -0.73
NCKAP1-208ENST00000495619 ERBB4Q15303 1308 aa10.46□□□□□ -0.73
NCKAP1-208ENST00000495619 DKK1O94907 266 aa10.45□□□□□ -0.74
NCKAP1-208ENST00000495619 GMPRP36959 345 aa10.45□□□□□ -0.74
NCKAP1-208ENST00000495619 ARSJQ5FYB0 599 aaPredicted RBP10.45□□□□□ -0.74
NCKAP1-208ENST00000495619 LCE2AQ5TA79 106 aaPredicted RBP10.45□□□□□ -0.74
NCKAP1-208ENST00000495619 L3MBTL2Q969R5 705 aa10.45□□□□□ -0.74
NCKAP1-208ENST00000495619 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.44□□□□□ -0.74
NCKAP1-208ENST00000495619 WIPF1O43516 503 aa10.44□□□□□ -0.74
NCKAP1-208ENST00000495619 PPP1R12BO60237 982 aaPredicted RBP10.44□□□□□ -0.74
NCKAP1-208ENST00000495619 NOS2P35228 1153 aa10.44□□□□□ -0.74
NCKAP1-208ENST00000495619 ELOAQ14241 798 aaKnown RBP10.44□□□□□ -0.74
NCKAP1-208ENST00000495619 DBN1Q16643 649 aa10.44□□□□□ -0.74
NCKAP1-208ENST00000495619 BICDL1Q6ZP65 573 aa10.44□□□□□ -0.74
NCKAP1-208ENST00000495619 TSPAN10Q9H1Z9 355 aaPredicted RBP10.44□□□□□ -0.74
NCKAP1-208ENST00000495619 PHF24Q9UPV7 400 aa10.44□□□□□ -0.74
NCKAP1-208ENST00000495619 GJA3Q9Y6H8 435 aa10.44□□□□□ -0.74
NCKAP1-208ENST00000495619 ACIN1Q9UKV3 1341 aaKnown RBP10.43□□□□□ -0.74
NCKAP1-208ENST00000495619 PPP1R15AO75807 674 aaPredicted RBP10.43□□□□□ -0.74
NCKAP1-208ENST00000495619 INSM1Q01101 510 aaPredicted RBP10.43□□□□□ -0.74
NCKAP1-208ENST00000495619 FIGNL1Q6PIW4 674 aa10.43□□□□□ -0.74
NCKAP1-208ENST00000495619 ZNF837Q96EG3 531 aaPredicted RBP10.43□□□□□ -0.74
NCKAP1-208ENST00000495619 NEUROD4Q9HD90 331 aa10.43□□□□□ -0.74
NCKAP1-208ENST00000495619 TIMELESSQ9UNS1 1208 aa10.43□□□□□ -0.74
NCKAP1-208ENST00000495619 ATAD2Q6PL18 1390 aa10.42□□□□□ -0.74
NCKAP1-208ENST00000495619 ATG7O95352 703 aa10.42□□□□□ -0.74
NCKAP1-208ENST00000495619 TBCELQ5QJ74 424 aa10.42□□□□□ -0.74
NCKAP1-208ENST00000495619 CRISPLD1Q9H336 500 aa10.42□□□□□ -0.74
NCKAP1-208ENST00000495619 RUBCNLQ9H714 662 aa10.42□□□□□ -0.74
NCKAP1-208ENST00000495619 CUEDC1Q9NWM3 386 aaPredicted RBP10.42□□□□□ -0.74
NCKAP1-208ENST00000495619 USP3Q9Y6I4 520 aa10.42□□□□□ -0.74
NCKAP1-208ENST00000495619 SCG3Q8WXD2 468 aaKnown RBP10.41□□□□□ -0.74
NCKAP1-208ENST00000495619 GTPBP3Q969Y2 492 aaKnown RBP10.41□□□□□ -0.74
NCKAP1-208ENST00000495619 ARXQ96QS3 562 aa10.41□□□□□ -0.74
NCKAP1-208ENST00000495619 GPC6Q9Y625 555 aaPredicted RBP10.41□□□□□ -0.74
NCKAP1-208ENST00000495619 PARP3Q9Y6F1 533 aa10.41□□□□□ -0.74
NCKAP1-208ENST00000495619 SWI5Q1ZZU3 235 aa10.4□□□□□ -0.74
NCKAP1-208ENST00000495619 NLRP8Q86W28 1048 aa10.4□□□□□ -0.74
NCKAP1-208ENST00000495619 ZNF295-AS1Q8N0V1 137 aa10.4□□□□□ -0.74
NCKAP1-208ENST00000495619 STAG2Q8N3U4 1231 aa10.4□□□□□ -0.74
NCKAP1-208ENST00000495619 CHMP7Q8WUX9 453 aaPredicted RBP10.4□□□□□ -0.74
NCKAP1-208ENST00000495619 VTI1AQ96AJ9 217 aa10.4□□□□□ -0.74
NCKAP1-208ENST00000495619 COL25A1Q9BXS0 654 aaPredicted RBP10.4□□□□□ -0.74
NCKAP1-208ENST00000495619 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.4□□□□□ -0.74
NCKAP1-208ENST00000495619 NSFL1CQ9UNZ2 370 aaKnown RBP10.4□□□□□ -0.74
NCKAP1-208ENST00000495619 SUPT5HO00267 1087 aaKnown RBP10.39□□□□□ -0.75
NCKAP1-208ENST00000495619 IGFBP4P22692 258 aa10.39□□□□□ -0.75
NCKAP1-208ENST00000495619 SRPK2P78362 688 aaKnown RBP10.39□□□□□ -0.75
NCKAP1-208ENST00000495619 C1orf53Q5VUE5 145 aa10.39□□□□□ -0.75
NCKAP1-208ENST00000495619 CFHR5Q9BXR6 569 aa10.39□□□□□ -0.75
NCKAP1-208ENST00000495619 HIRAP54198 1017 aaPredicted RBP10.38□□□□□ -0.75
NCKAP1-208ENST00000495619 GPR161Q8N6U8 529 aaKnown RBP10.38□□□□□ -0.75
NCKAP1-208ENST00000495619 C1orf115Q9H7X2 142 aa10.38□□□□□ -0.75
NCKAP1-208ENST00000495619 A0A1W2PNR3 127 aa10.37□□□□□ -0.75
NCKAP1-208ENST00000495619 EML1O00423 815 aa10.37□□□□□ -0.75
NCKAP1-208ENST00000495619 ATP4AP20648 1035 aa10.37□□□□□ -0.75
NCKAP1-208ENST00000495619 HIF1AQ16665 826 aa10.37□□□□□ -0.75
NCKAP1-208ENST00000495619 ZDHHC1Q8WTX9 485 aa10.37□□□□□ -0.75
NCKAP1-208ENST00000495619 CNTNAP3BQ96NU0 1288 aa10.37□□□□□ -0.75
NCKAP1-208ENST00000495619 CNTNAP3Q9BZ76 1288 aa10.37□□□□□ -0.75
NCKAP1-208ENST00000495619 ANKIB1Q9P2G1 1089 aa10.37□□□□□ -0.75
NCKAP1-208ENST00000495619 RHPN1Q8TCX5 695 aa10.36□□□□□ -0.75
NCKAP1-208ENST00000495619 HCN4Q9Y3Q4 1203 aa10.36□□□□□ -0.75
NCKAP1-208ENST00000495619 FOXO3O43524 673 aa10.35□□□□□ -0.75
NCKAP1-208ENST00000495619 TXLNAP40222 546 aa10.35□□□□□ -0.75
NCKAP1-208ENST00000495619 LCE2CQ5TA81 110 aa10.35□□□□□ -0.75
NCKAP1-208ENST00000495619 ZIC5Q96T25 663 aa10.35□□□□□ -0.75
NCKAP1-208ENST00000495619 C2orf49Q9BVC5 232 aaPredicted RBP10.35□□□□□ -0.75
NCKAP1-208ENST00000495619 MBIPQ9NS73 344 aa10.35□□□□□ -0.75
NCKAP1-208ENST00000495619 ATXN7L1Q9ULK2 861 aaPredicted RBP10.35□□□□□ -0.75
NCKAP1-208ENST00000495619 PCDHGC4Q9Y5F7 938 aa10.35□□□□□ -0.75
NCKAP1-208ENST00000495619 FAM181BA6NEQ2 426 aa10.34□□□□□ -0.75
NCKAP1-208ENST00000495619 GPR25O00155 361 aa10.34□□□□□ -0.75
NCKAP1-208ENST00000495619 C21orf2O43822 256 aa10.34□□□□□ -0.75
NCKAP1-208ENST00000495619 PHACTR1Q9C0D0 580 aa10.34□□□□□ -0.75
NCKAP1-208ENST00000495619 ATXN7O15265 892 aaPredicted RBP10.33□□□□□ -0.76
NCKAP1-208ENST00000495619 MX2P20592 715 aa10.33□□□□□ -0.76
NCKAP1-208ENST00000495619 WEE1P30291 646 aa10.33□□□□□ -0.76
NCKAP1-208ENST00000495619 ZCCHC2Q9C0B9 1178 aaKnown RBP10.33□□□□□ -0.76
NCKAP1-208ENST00000495619 ZMIZ1Q9ULJ6 1067 aa10.33□□□□□ -0.76
NCKAP1-208ENST00000495619 SRSF11Q05519 484 aaKnown RBP10.32□□□□□ -0.76
NCKAP1-208ENST00000495619 POTEAQ6S8J7 498 aa10.32□□□□□ -0.76
NCKAP1-208ENST00000495619 ALDH16A1Q8IZ83 802 aa10.32□□□□□ -0.76
NCKAP1-208ENST00000495619 ZSCAN1Q8NBB4 408 aa10.32□□□□□ -0.76
NCKAP1-208ENST00000495619 STK32AQ8WU08 396 aa10.32□□□□□ -0.76
NCKAP1-208ENST00000495619 ARID3AQ99856 593 aa10.32□□□□□ -0.76
NCKAP1-208ENST00000495619 LGR5O75473 907 aa10.31□□□□□ -0.76
NCKAP1-208ENST00000495619 RNFT1Q5M7Z0 435 aa10.31□□□□□ -0.76
NCKAP1-208ENST00000495619 NGLY1Q96IV0 654 aa10.31□□□□□ -0.76
NCKAP1-208ENST00000495619 MAP2K3P46734 347 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms