RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 TAF7Q15545 349 aaPredicted RBP22.92■■□□□ 1.26
CTNS-207ENST00000495445 EIF5P55010 431 aaKnown RBP22.91■■□□□ 1.26
CTNS-207ENST00000495445 TM4SF1P30408 202 aa22.9■■□□□ 1.26
CTNS-207ENST00000495445 FKBP8Q14318 412 aa22.9■■□□□ 1.26
CTNS-207ENST00000495445 GPR162Q16538 588 aa22.9■■□□□ 1.26
CTNS-207ENST00000495445 NARFQ9UHQ1 456 aa22.9■■□□□ 1.26
CTNS-207ENST00000495445 DLG5Q8TDM6 1919 aa22.89■■□□□ 1.25
CTNS-207ENST00000495445 YY1P25490 414 aa22.88■■□□□ 1.25
CTNS-207ENST00000495445 ZPR1O75312 459 aa22.87■■□□□ 1.25
CTNS-207ENST00000495445 YBX3P16989 372 aaKnown RBP eCLIP22.87■■□□□ 1.25
CTNS-207ENST00000495445 CANXP27824 592 aaKnown RBP22.87■■□□□ 1.25
CTNS-207ENST00000495445 USPL1Q5W0Q7 1092 aa22.87■■□□□ 1.25
CTNS-207ENST00000495445 USP16Q9Y5T5 823 aa22.87■■□□□ 1.25
CTNS-207ENST00000495445 COL15A1P39059 1388 aa22.87■■□□□ 1.25
CTNS-207ENST00000495445 MAPK8IP3Q9UPT6 1336 aa22.86■■□□□ 1.25
CTNS-207ENST00000495445 BCL2L12Q9HB09 334 aa22.86■■□□□ 1.25
CTNS-207ENST00000495445 PARP3Q9Y6F1 533 aa22.86■■□□□ 1.25
CTNS-207ENST00000495445 A1BGP04217 495 aa22.85■■□□□ 1.25
CTNS-207ENST00000495445 SNRPA1P09661 255 aaKnown RBP22.85■■□□□ 1.25
CTNS-207ENST00000495445 IL6STP40189 918 aaPredicted RBP22.85■■□□□ 1.25
CTNS-207ENST00000495445 MIS18AQ9NYP9 233 aa22.85■■□□□ 1.25
CTNS-207ENST00000495445 KIF13BQ9NQT8 1826 aa22.85■■□□□ 1.25
CTNS-207ENST00000495445 PRAMEF22A3QJZ6 481 aa22.84■■□□□ 1.25
CTNS-207ENST00000495445 TMPOP42166 694 aaKnown RBP22.84■■□□□ 1.25
CTNS-207ENST00000495445 TGFB2P61812 414 aa22.84■■□□□ 1.25
CTNS-207ENST00000495445 DDR1Q08345 913 aa22.84■■□□□ 1.25
CTNS-207ENST00000495445 A0A087WZG4 1122 aa22.83■■□□□ 1.25
CTNS-207ENST00000495445 ZNF316A6NFI3 1004 aaPredicted RBP22.83■■□□□ 1.25
CTNS-207ENST00000495445 GRIN3BO60391 1043 aa22.83■■□□□ 1.25
CTNS-207ENST00000495445 RIPK4P57078 832 aa22.83■■□□□ 1.25
CTNS-207ENST00000495445 PNISRQ8TF01 805 aaKnown RBP22.83■■□□□ 1.25
CTNS-207ENST00000495445 ADAMTS8Q9UP79 889 aa22.83■■□□□ 1.25
CTNS-207ENST00000495445 C10orf71Q711Q0 1435 aa22.82■■□□□ 1.24
CTNS-207ENST00000495445 POLRMTO00411 1230 aaKnown RBP22.82■■□□□ 1.24
CTNS-207ENST00000495445 THUMPD2Q9BTF0 503 aaKnown RBP22.82■■□□□ 1.24
CTNS-207ENST00000495445 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
CTNS-207ENST00000495445 CHD4Q14839 1912 aa22.8■■□□□ 1.24
CTNS-207ENST00000495445 NFIXQ14938 502 aa22.8■■□□□ 1.24
CTNS-207ENST00000495445 RUNDC1Q96C34 613 aa22.8■■□□□ 1.24
CTNS-207ENST00000495445 EIF4A1P60842 406 aaKnown RBP22.79■■□□□ 1.24
CTNS-207ENST00000495445 WDR43Q15061 677 aaKnown RBP eCLIP22.79■■□□□ 1.24
CTNS-207ENST00000495445 KIAA1551Q9HCM1 1747 aa22.79■■□□□ 1.24
CTNS-207ENST00000495445 CCDC146Q8IYE0 955 aa22.78■■□□□ 1.24
CTNS-207ENST00000495445 BABAM1Q9NWV8 329 aa22.78■■□□□ 1.24
CTNS-207ENST00000495445 PXDNLA1KZ92 1463 aa22.78■■□□□ 1.24
CTNS-207ENST00000495445 A0A0G2JLW4 131 aa22.77■■□□□ 1.24
CTNS-207ENST00000495445 GIGYF1O75420 1035 aaPredicted RBP22.77■■□□□ 1.24
CTNS-207ENST00000495445 KCNA3P22001 575 aa22.77■■□□□ 1.24
CTNS-207ENST00000495445 TBC1D2BQ9UPU7 963 aa22.77■■□□□ 1.24
CTNS-207ENST00000495445 KDM3BQ7LBC6 1761 aa22.76■■□□□ 1.23
CTNS-207ENST00000495445 NBPF26B4DH59 902 aa22.76■■□□□ 1.23
CTNS-207ENST00000495445 NBPF10Q6P3W6 841 aaKnown RBP22.76■■□□□ 1.23
CTNS-207ENST00000495445 NBPF15Q8N660 670 aa22.76■■□□□ 1.23
CTNS-207ENST00000495445 CAMTA2O94983 1202 aa22.75■■□□□ 1.23
CTNS-207ENST00000495445 DPEP1P16444 411 aa22.75■■□□□ 1.23
CTNS-207ENST00000495445 LMOD3Q0VAK6 560 aa22.75■■□□□ 1.23
CTNS-207ENST00000495445 TRIM35Q9UPQ4 493 aa22.75■■□□□ 1.23
CTNS-207ENST00000495445 RRP7AQ9Y3A4 280 aaKnown RBP22.74■■□□□ 1.23
CTNS-207ENST00000495445 SERPINB2P05120 415 aa22.73■■□□□ 1.23
CTNS-207ENST00000495445 PIP4K2AP48426 406 aaPredicted RBP22.73■■□□□ 1.23
CTNS-207ENST00000495445 TBC1D9BQ66K14 1250 aa22.73■■□□□ 1.23
CTNS-207ENST00000495445 NRXN2Q9P2S2 1712 aa22.73■■□□□ 1.23
CTNS-207ENST00000495445 N4BP2Q86UW6 1770 aaPredicted RBP22.72■■□□□ 1.23
CTNS-207ENST00000495445 ZNF330Q9Y3S2 320 aaPredicted RBP22.72■■□□□ 1.23
CTNS-207ENST00000495445 RGL2O15211 777 aa22.71■■□□□ 1.23
CTNS-207ENST00000495445 NEUROD2Q15784 382 aa22.71■■□□□ 1.23
CTNS-207ENST00000495445 CLEC4GQ6UXB4 293 aa22.71■■□□□ 1.23
CTNS-207ENST00000495445 NPM2Q86SE8 214 aaKnown RBP22.71■■□□□ 1.23
CTNS-207ENST00000495445 DZIP3Q86Y13 1208 aaKnown RBP22.71■■□□□ 1.23
CTNS-207ENST00000495445 ZNF784Q8NCA9 323 aaPredicted RBP22.71■■□□□ 1.23
CTNS-207ENST00000495445 TSPYL4Q9UJ04 414 aa22.71■■□□□ 1.23
CTNS-207ENST00000495445 AFDNP55196 1824 aaKnown RBP22.71■■□□□ 1.23
CTNS-207ENST00000495445 CCDC184Q52MB2 194 aa22.7■■□□□ 1.22
CTNS-207ENST00000495445 CHL1O00533 1208 aa22.69■■□□□ 1.22
CTNS-207ENST00000495445 WWC3Q9ULE0 1092 aa22.69■■□□□ 1.22
CTNS-207ENST00000495445 SCN7AQ01118 1682 aa22.68■■□□□ 1.22
CTNS-207ENST00000495445 BICDL1Q6ZP65 573 aa22.68■■□□□ 1.22
CTNS-207ENST00000495445 PIM2Q9P1W9 311 aa22.68■■□□□ 1.22
CTNS-207ENST00000495445 BRCA1P38398 1863 aaKnown RBP22.67■■□□□ 1.22
CTNS-207ENST00000495445 CHRNA5P30532 468 aa22.66■■□□□ 1.22
CTNS-207ENST00000495445 SETDB2Q96T68 719 aa22.66■■□□□ 1.22
CTNS-207ENST00000495445 BCS1LQ9Y276 419 aa22.66■■□□□ 1.22
CTNS-207ENST00000495445 LAMB4A4D0S4 1761 aa22.66■■□□□ 1.22
CTNS-207ENST00000495445 BCORQ6W2J9 1755 aa22.65■■□□□ 1.22
CTNS-207ENST00000495445 CARMIL3Q8ND23 1372 aa22.64■■□□□ 1.22
CTNS-207ENST00000495445 APAF1O14727 1248 aa22.64■■□□□ 1.21
CTNS-207ENST00000495445 PRR5LQ6MZQ0 368 aa22.64■■□□□ 1.21
CTNS-207ENST00000495445 ERBB4Q15303 1308 aa22.63■■□□□ 1.21
CTNS-207ENST00000495445 ERVV-1B6SEH8 477 aa22.63■■□□□ 1.21
CTNS-207ENST00000495445 PDIA6Q15084 440 aa22.63■■□□□ 1.21
CTNS-207ENST00000495445 DALRD3Q5D0E6 543 aaKnown RBP22.63■■□□□ 1.21
CTNS-207ENST00000495445 LRP10Q7Z4F1 713 aa22.63■■□□□ 1.21
CTNS-207ENST00000495445 HLFQ16534 295 aa22.62■■□□□ 1.21
CTNS-207ENST00000495445 CFAP44Q96MT7 982 aa22.62■■□□□ 1.21
CTNS-207ENST00000495445 BRIP1Q9BX63 1249 aa22.62■■□□□ 1.21
CTNS-207ENST00000495445 ZNF652Q9Y2D9 606 aa22.62■■□□□ 1.21
CTNS-207ENST00000495445 ANP32CO43423 234 aa22.61■■□□□ 1.21
CTNS-207ENST00000495445 ZNF853P0CG23 659 aa22.61■■□□□ 1.21
CTNS-207ENST00000495445 TTLL7Q6ZT98 887 aa22.6■■□□□ 1.21
CTNS-207ENST00000495445 PDZRN3Q9UPQ7 1066 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms