RNA–Protein interactions for RNA: ENST00000495399.1

C9orf135-204, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 2

Gene C9orf135, Length 502 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-204ENST00000495399 CCDC85CA6NKD9 419 aa10.77□□□□□ -0.69
C9orf135-204ENST00000495399 VEGFBP49765 207 aa10.77□□□□□ -0.69
C9orf135-204ENST00000495399 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
C9orf135-204ENST00000495399 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
C9orf135-204ENST00000495399 C4AP0C0L4 1744 aa10.77□□□□□ -0.69
C9orf135-204ENST00000495399 LINC00116Q8NCU8 138 aa10.76□□□□□ -0.69
C9orf135-204ENST00000495399 ZCRB1Q8TBF4 217 aaKnown RBP10.76□□□□□ -0.69
C9orf135-204ENST00000495399 AK7Q96M32 723 aa10.76□□□□□ -0.69
C9orf135-204ENST00000495399 ITGB4P16144 1822 aa10.76□□□□□ -0.69
C9orf135-204ENST00000495399 ZC3H4Q9UPT8 1303 aaKnown RBP10.76□□□□□ -0.69
C9orf135-204ENST00000495399 STAC3Q96MF2 364 aa10.75□□□□□ -0.69
C9orf135-204ENST00000495399 MON2Q7Z3U7 1717 aa10.75□□□□□ -0.69
C9orf135-204ENST00000495399 CCDC88AQ3V6T2 1871 aa10.74□□□□□ -0.69
C9orf135-204ENST00000495399 NBPF1Q3BBV0 1214 aa10.74□□□□□ -0.69
C9orf135-204ENST00000495399 PASKQ96RG2 1323 aa10.74□□□□□ -0.69
C9orf135-204ENST00000495399 TIAM2Q8IVF5 1701 aa10.73□□□□□ -0.69
C9orf135-204ENST00000495399 AIDAQ96BJ3 306 aa10.73□□□□□ -0.69
C9orf135-204ENST00000495399 PIM2Q9P1W9 311 aa10.73□□□□□ -0.69
C9orf135-204ENST00000495399 HMGB2P26583 209 aaKnown RBP10.72□□□□□ -0.69
C9orf135-204ENST00000495399 RASSF7Q02833 373 aa10.72□□□□□ -0.69
C9orf135-204ENST00000495399 ITPK1Q13572 414 aa10.72□□□□□ -0.69
C9orf135-204ENST00000495399 IP6K1Q92551 441 aa10.72□□□□□ -0.69
C9orf135-204ENST00000495399 CENPJQ9HC77 1338 aaPredicted RBP10.72□□□□□ -0.69
C9orf135-204ENST00000495399 POTEB3A0JP26 581 aa10.71□□□□□ -0.69
C9orf135-204ENST00000495399 DALRD3Q5D0E6 543 aaKnown RBP10.71□□□□□ -0.69
C9orf135-204ENST00000495399 POTEBQ6S5H4 581 aa10.71□□□□□ -0.69
C9orf135-204ENST00000495399 THSD7BQ9C0I4 1608 aa10.7□□□□□ -0.7
C9orf135-204ENST00000495399 NME9Q86XW9 330 aa10.7□□□□□ -0.7
C9orf135-204ENST00000495399 L3MBTL3Q96JM7 780 aaPredicted RBP10.7□□□□□ -0.7
C9orf135-204ENST00000495399 CCDC87Q9NVE4 849 aa10.7□□□□□ -0.7
C9orf135-204ENST00000495399 SBNO2Q9Y2G9 1366 aa10.69□□□□□ -0.7
C9orf135-204ENST00000495399 PYGBP11216 843 aa10.69□□□□□ -0.7
C9orf135-204ENST00000495399 GYS1P13807 737 aa10.69□□□□□ -0.7
C9orf135-204ENST00000495399 GOLGA2Q08379 1002 aa10.69□□□□□ -0.7
C9orf135-204ENST00000495399 MPRIPQ6WCQ1 1025 aa10.69□□□□□ -0.7
C9orf135-204ENST00000495399 NLGN1Q8N2Q7 840 aa10.69□□□□□ -0.7
C9orf135-204ENST00000495399 CD163L1Q9NR16 1453 aa10.68□□□□□ -0.7
C9orf135-204ENST00000495399 KTN1Q86UP2 1357 aaKnown RBP10.68□□□□□ -0.7
C9orf135-204ENST00000495399 GNPATO15228 680 aa10.68□□□□□ -0.7
C9orf135-204ENST00000495399 ITGBL1O95965 494 aaPredicted RBP10.68□□□□□ -0.7
C9orf135-204ENST00000495399 CHRNA5P30532 468 aa10.68□□□□□ -0.7
C9orf135-204ENST00000495399 TMF1P82094 1093 aa10.68□□□□□ -0.7
C9orf135-204ENST00000495399 PIGBQ92521 554 aa10.68□□□□□ -0.7
C9orf135-204ENST00000495399 SMARCC1Q92922 1105 aaPredicted RBP10.68□□□□□ -0.7
C9orf135-204ENST00000495399 LTV1Q96GA3 475 aaPredicted RBP10.68□□□□□ -0.7
C9orf135-204ENST00000495399 DICER1Q9UPY3 1922 aaKnown RBP10.67□□□□□ -0.7
C9orf135-204ENST00000495399 LOC102724428A0A0B4J2F2 783 aa10.67□□□□□ -0.7
C9orf135-204ENST00000495399 RASSF10A6NK89 507 aa10.67□□□□□ -0.7
C9orf135-204ENST00000495399 LMNB1P20700 586 aa10.67□□□□□ -0.7
C9orf135-204ENST00000495399 SIK1P57059 783 aa10.67□□□□□ -0.7
C9orf135-204ENST00000495399 DCAF8Q5TAQ9 597 aa10.67□□□□□ -0.7
C9orf135-204ENST00000495399 PCDHB8Q9UN66 801 aa10.67□□□□□ -0.7
C9orf135-204ENST00000495399 CYP27B1O15528 508 aa10.66□□□□□ -0.7
C9orf135-204ENST00000495399 LTBP1Q14766 1721 aa10.66□□□□□ -0.7
C9orf135-204ENST00000495399 ADAMTSL1Q8N6G6 1762 aa10.65□□□□□ -0.7
C9orf135-204ENST00000495399 NFKBIEO00221 500 aa10.65□□□□□ -0.7
C9orf135-204ENST00000495399 DDR1Q08345 913 aa10.65□□□□□ -0.7
C9orf135-204ENST00000495399 MKRN3Q13064 507 aaKnown RBP10.65□□□□□ -0.7
C9orf135-204ENST00000495399 PRPF38BQ5VTL8 546 aaKnown RBP10.65□□□□□ -0.7
C9orf135-204ENST00000495399 NBPF6Q5VWK0 638 aa10.65□□□□□ -0.7
C9orf135-204ENST00000495399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.65□□□□□ -0.7
C9orf135-204ENST00000495399 PDCD7Q8N8D1 485 aaKnown RBP10.65□□□□□ -0.7
C9orf135-204ENST00000495399 ARHGEF1Q92888 912 aaKnown RBP10.65□□□□□ -0.7
C9orf135-204ENST00000495399 NBPF4Q96M43 638 aa10.65□□□□□ -0.7
C9orf135-204ENST00000495399 MCOLN1Q9GZU1 580 aa10.65□□□□□ -0.7
C9orf135-204ENST00000495399 MYH14Q7Z406 1995 aaKnown RBP10.65□□□□□ -0.71
C9orf135-204ENST00000495399 DLEC1Q9Y238 1755 aa10.65□□□□□ -0.71
C9orf135-204ENST00000495399 COL5A3P25940 1745 aaPredicted RBP10.64□□□□□ -0.71
C9orf135-204ENST00000495399 TMEM88BA6NKF7 163 aa10.64□□□□□ -0.71
C9orf135-204ENST00000495399 HOXC9P31274 260 aa10.64□□□□□ -0.71
C9orf135-204ENST00000495399 TRAPPC3LQ5T215 181 aa10.64□□□□□ -0.71
C9orf135-204ENST00000495399 SLC4A9Q96Q91 983 aa10.64□□□□□ -0.71
C9orf135-204ENST00000495399 SIN3AQ96ST3 1273 aa10.64□□□□□ -0.71
C9orf135-204ENST00000495399 PARP3Q9Y6F1 533 aa10.64□□□□□ -0.71
C9orf135-204ENST00000495399 ZNF831Q5JPB2 1677 aa10.63□□□□□ -0.71
C9orf135-204ENST00000495399 CGNL1Q0VF96 1302 aa10.63□□□□□ -0.71
C9orf135-204ENST00000495399 WDR33Q9C0J8 1336 aaKnown RBP10.63□□□□□ -0.71
C9orf135-204ENST00000495399 MAP2K1Q02750 393 aaPredicted RBP10.63□□□□□ -0.71
C9orf135-204ENST00000495399 KDRP35968 1356 aa10.63□□□□□ -0.71
C9orf135-204ENST00000495399 CASP8AP2Q9UKL3 1982 aa10.63□□□□□ -0.71
C9orf135-204ENST00000495399 MAP3K19Q56UN5 1328 aa10.62□□□□□ -0.71
C9orf135-204ENST00000495399 EVC2Q86UK5 1308 aa10.62□□□□□ -0.71
C9orf135-204ENST00000495399 FBLN1P23142 703 aa10.62□□□□□ -0.71
C9orf135-204ENST00000495399 NKX1-1Q15270 411 aaPredicted RBP10.62□□□□□ -0.71
C9orf135-204ENST00000495399 DEFB115Q30KQ5 88 aa10.62□□□□□ -0.71
C9orf135-204ENST00000495399 USHBP1Q8N6Y0 703 aa10.62□□□□□ -0.71
C9orf135-204ENST00000495399 ASAP1Q9ULH1 1129 aa10.62□□□□□ -0.71
C9orf135-204ENST00000495399 ADAMTS7Q9UKP4 1686 aa10.62□□□□□ -0.71
C9orf135-204ENST00000495399 RNF166Q96A37 237 aaPredicted RBP10.61□□□□□ -0.71
C9orf135-204ENST00000495399 FER1L6Q2WGJ9 1857 aa10.61□□□□□ -0.71
C9orf135-204ENST00000495399 PCDH11XQ9BZA7 1347 aa10.6□□□□□ -0.71
C9orf135-204ENST00000495399 PCDH11YQ9BZA8 1340 aa10.6□□□□□ -0.71
C9orf135-204ENST00000495399 ATP6V1AP38606 617 aa10.6□□□□□ -0.71
C9orf135-204ENST00000495399 FKBP8Q14318 412 aa10.6□□□□□ -0.71
C9orf135-204ENST00000495399 RC3H1Q5TC82 1133 aaKnown RBP10.6□□□□□ -0.71
C9orf135-204ENST00000495399 LDHDQ86WU2 507 aa10.6□□□□□ -0.71
C9orf135-204ENST00000495399 TSKSQ9UJT2 592 aa10.6□□□□□ -0.71
C9orf135-204ENST00000495399 RTCBQ9Y3I0 505 aaKnown RBP10.6□□□□□ -0.71
C9orf135-204ENST00000495399 NRXN2Q9P2S2 1712 aa10.6□□□□□ -0.71
C9orf135-204ENST00000495399 SCN4AP35499 1836 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms