RNA–Protein interactions for RNA: ENST00000495198.6

SREK1IP1-201, Transcript of SREK1 interacting protein 1, humanhuman

TSL 3

Gene SREK1IP1, Length 816 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1-201ENST00000495198 ZCCHC2Q9C0B9 1178 aaKnown RBP11.52□□□□□ -0.57
SREK1IP1-201ENST00000495198 NDUFB9Q9Y6M9 179 aa11.52□□□□□ -0.57
SREK1IP1-201ENST00000495198 MYCP01106 439 aaPredicted RBP11.51□□□□□ -0.57
SREK1IP1-201ENST00000495198 PLA2G4AP47712 749 aa11.51□□□□□ -0.57
SREK1IP1-201ENST00000495198 SCNN1DP51172 638 aa11.51□□□□□ -0.57
SREK1IP1-201ENST00000495198 BRPF1P55201 1214 aaPredicted RBP11.51□□□□□ -0.57
SREK1IP1-201ENST00000495198 ESF1Q9H501 851 aaKnown RBP11.51□□□□□ -0.57
SREK1IP1-201ENST00000495198 TLR1Q15399 786 aa11.5□□□□□ -0.57
SREK1IP1-201ENST00000495198 TMEM132AQ24JP5 1023 aa11.5□□□□□ -0.57
SREK1IP1-201ENST00000495198 CHSY3Q70JA7 882 aa11.5□□□□□ -0.57
SREK1IP1-201ENST00000495198 TRIM11Q96F44 468 aa11.5□□□□□ -0.57
SREK1IP1-201ENST00000495198 IL27Q8NEV9 243 aa11.49□□□□□ -0.57
SREK1IP1-201ENST00000495198 ZNF330Q9Y3S2 320 aaPredicted RBP11.49□□□□□ -0.57
SREK1IP1-201ENST00000495198 NCAPD3P42695 1498 aa11.49□□□□□ -0.57
SREK1IP1-201ENST00000495198 DOC2BQ14184 412 aa11.48□□□□□ -0.57
SREK1IP1-201ENST00000495198 FOXD4L6Q3SYB3 417 aaPredicted RBP11.48□□□□□ -0.57
SREK1IP1-201ENST00000495198 ESCO1Q5FWF5 840 aa11.48□□□□□ -0.57
SREK1IP1-201ENST00000495198 FOXD4L3Q6VB84 417 aaPredicted RBP11.48□□□□□ -0.57
SREK1IP1-201ENST00000495198 BANK1Q8NDB2 785 aa11.48□□□□□ -0.57
SREK1IP1-201ENST00000495198 ZNF592Q92610 1267 aa11.48□□□□□ -0.57
SREK1IP1-201ENST00000495198 CHIC2Q9UKJ5 165 aa11.47□□□□□ -0.57
SREK1IP1-201ENST00000495198 PCDHGC4Q9Y5F7 938 aa11.47□□□□□ -0.57
SREK1IP1-201ENST00000495198 USP3Q9Y6I4 520 aa11.47□□□□□ -0.57
SREK1IP1-201ENST00000495198 CD33P20138 364 aa11.46□□□□□ -0.57
SREK1IP1-201ENST00000495198 TNP2Q05952 138 aa11.46□□□□□ -0.57
SREK1IP1-201ENST00000495198 SEMA6BQ9H3T3 888 aa11.46□□□□□ -0.57
SREK1IP1-201ENST00000495198 DCDC2BA2VCK2 349 aa11.45□□□□□ -0.58
SREK1IP1-201ENST00000495198 MAPTP10636 758 aaKnown RBP11.45□□□□□ -0.58
SREK1IP1-201ENST00000495198 TBC1D9Q6ZT07 1266 aa11.45□□□□□ -0.58
SREK1IP1-201ENST00000495198 DOLKQ9UPQ8 538 aa11.45□□□□□ -0.58
SREK1IP1-201ENST00000495198 NESP48681 1621 aa11.45□□□□□ -0.58
SREK1IP1-201ENST00000495198 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
SREK1IP1-201ENST00000495198 SMARCA2P51531 1590 aa11.43□□□□□ -0.58
SREK1IP1-201ENST00000495198 ATXN7O15265 892 aaPredicted RBP11.43□□□□□ -0.58
SREK1IP1-201ENST00000495198 GTF2E1P29083 439 aaPredicted RBP11.43□□□□□ -0.58
SREK1IP1-201ENST00000495198 IRF5Q13568 498 aa11.43□□□□□ -0.58
SREK1IP1-201ENST00000495198 FAM182BQ5T319 152 aa11.42□□□□□ -0.58
SREK1IP1-201ENST00000495198 FIGNL1Q6PIW4 674 aa11.42□□□□□ -0.58
SREK1IP1-201ENST00000495198 NLRP8Q86W28 1048 aa11.42□□□□□ -0.58
SREK1IP1-201ENST00000495198 MDFIQ99750 246 aa11.42□□□□□ -0.58
SREK1IP1-201ENST00000495198 STRN4Q9NRL3 753 aa11.42□□□□□ -0.58
SREK1IP1-201ENST00000495198 NOP53Q9NZM5 478 aaKnown RBP11.42□□□□□ -0.58
SREK1IP1-201ENST00000495198 TBC1D2BQ9UPU7 963 aa11.42□□□□□ -0.58
SREK1IP1-201ENST00000495198 INHAP05111 366 aa11.41□□□□□ -0.58
SREK1IP1-201ENST00000495198 ADH6P28332 368 aa11.41□□□□□ -0.58
SREK1IP1-201ENST00000495198 GDF10P55107 478 aa11.41□□□□□ -0.58
SREK1IP1-201ENST00000495198 OXLD1Q5BKU9 147 aa11.41□□□□□ -0.58
SREK1IP1-201ENST00000495198 IQSEC3Q9UPP2 1182 aaPredicted RBP11.41□□□□□ -0.58
SREK1IP1-201ENST00000495198 A0A1W2PNR3 127 aa11.4□□□□□ -0.58
SREK1IP1-201ENST00000495198 RSPO4Q2I0M5 234 aaPredicted RBP11.4□□□□□ -0.58
SREK1IP1-201ENST00000495198 PCBP4P57723 403 aaKnown RBP11.39□□□□□ -0.59
SREK1IP1-201ENST00000495198 USP4Q13107 963 aa11.39□□□□□ -0.59
SREK1IP1-201ENST00000495198 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
SREK1IP1-201ENST00000495198 BAZ1BQ9UIG0 1483 aaKnown RBP11.38□□□□□ -0.59
SREK1IP1-201ENST00000495198 PIK3R2O00459 728 aa11.38□□□□□ -0.59
SREK1IP1-201ENST00000495198 C1orf216Q8TAB5 229 aa11.38□□□□□ -0.59
SREK1IP1-201ENST00000495198 PLVAPQ9BX97 442 aa11.38□□□□□ -0.59
SREK1IP1-201ENST00000495198 HMGXB3Q12766 1538 aa11.38□□□□□ -0.59
SREK1IP1-201ENST00000495198 TMEM229AB2RXF0 380 aa11.37□□□□□ -0.59
SREK1IP1-201ENST00000495198 SMTNP53814 917 aa11.37□□□□□ -0.59
SREK1IP1-201ENST00000495198 NKAPLQ5M9Q1 402 aa11.37□□□□□ -0.59
SREK1IP1-201ENST00000495198 ZMYM1Q5SVZ6 1142 aa11.37□□□□□ -0.59
SREK1IP1-201ENST00000495198 ZNF468Q5VIY5 522 aaPredicted RBP11.37□□□□□ -0.59
SREK1IP1-201ENST00000495198 ZIC5Q96T25 663 aa11.37□□□□□ -0.59
SREK1IP1-201ENST00000495198 AVENQ9NQS1 362 aaPredicted RBP11.37□□□□□ -0.59
SREK1IP1-201ENST00000495198 SMARCA4P51532 1647 aa11.37□□□□□ -0.59
SREK1IP1-201ENST00000495198 KHNYNO15037 678 aaKnown RBP11.36□□□□□ -0.59
SREK1IP1-201ENST00000495198 COL9A3Q14050 684 aaPredicted RBP11.36□□□□□ -0.59
SREK1IP1-201ENST00000495198 NIFKQ9BYG3 293 aaKnown RBP11.36□□□□□ -0.59
SREK1IP1-201ENST00000495198 EFSO43281 561 aa11.35□□□□□ -0.59
SREK1IP1-201ENST00000495198 FAM157BP0CG42 384 aa11.35□□□□□ -0.59
SREK1IP1-201ENST00000495198 KRTAP1-3Q8IUG1 177 aa11.35□□□□□ -0.59
SREK1IP1-201ENST00000495198 AIDAQ96BJ3 306 aa11.35□□□□□ -0.59
SREK1IP1-201ENST00000495198 GATA4P43694 442 aa11.34□□□□□ -0.59
SREK1IP1-201ENST00000495198 MTFR1Q15390 333 aa11.34□□□□□ -0.59
SREK1IP1-201ENST00000495198 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
SREK1IP1-201ENST00000495198 SPATA31C1P0DKV0 1188 aa11.33□□□□□ -0.6
SREK1IP1-201ENST00000495198 TPSG1Q9NRR2 321 aa11.33□□□□□ -0.6
SREK1IP1-201ENST00000495198 SERTAD1Q9UHV2 236 aa11.33□□□□□ -0.6
SREK1IP1-201ENST00000495198 SLFNL1Q499Z3 407 aa11.32□□□□□ -0.6
SREK1IP1-201ENST00000495198 SLC4A9Q96Q91 983 aa11.32□□□□□ -0.6
SREK1IP1-201ENST00000495198 KRTAP4-12Q9BQ66 201 aa11.32□□□□□ -0.6
SREK1IP1-201ENST00000495198 THOC2Q8NI27 1593 aaKnown RBP11.32□□□□□ -0.6
SREK1IP1-201ENST00000495198 ARSJQ5FYB0 599 aaPredicted RBP11.31□□□□□ -0.6
SREK1IP1-201ENST00000495198 PDS5BQ9NTI5 1447 aa11.31□□□□□ -0.6
SREK1IP1-201ENST00000495198 LAMC3Q9Y6N6 1575 aa11.31□□□□□ -0.6
SREK1IP1-201ENST00000495198 BAZ1AQ9NRL2 1556 aaPredicted RBP11.3□□□□□ -0.6
SREK1IP1-201ENST00000495198 TXLNAP40222 546 aa11.3□□□□□ -0.6
SREK1IP1-201ENST00000495198 VAC14Q08AM6 782 aa11.3□□□□□ -0.6
SREK1IP1-201ENST00000495198 SAMD5Q5TGI4 173 aa11.3□□□□□ -0.6
SREK1IP1-201ENST00000495198 ZDHHC1Q8WTX9 485 aa11.3□□□□□ -0.6
SREK1IP1-201ENST00000495198 ZDHHC3Q9NYG2 299 aa11.3□□□□□ -0.6
SREK1IP1-201ENST00000495198 PARP3Q9Y6F1 533 aa11.3□□□□□ -0.6
SREK1IP1-201ENST00000495198 FAM229AH3BQW9 127 aa11.29□□□□□ -0.6
SREK1IP1-201ENST00000495198 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.6
SREK1IP1-201ENST00000495198 STARD13Q9Y3M8 1113 aa11.29□□□□□ -0.6
SREK1IP1-201ENST00000495198 KIF21AQ7Z4S6 1674 aa11.29□□□□□ -0.6
SREK1IP1-201ENST00000495198 PLPP7Q8NBV4 271 aa11.28□□□□□ -0.6
SREK1IP1-201ENST00000495198 ELOA3CA0A087WX78 387 aaPredicted RBP11.27□□□□□ -0.61
SREK1IP1-201ENST00000495198 A6NJY4 79 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms