RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 A0A0G2JLW4 131 aa15.67■□□□□ 0.1
VTI1A-208ENST00000494728 SBF1O95248 1867 aa15.66■□□□□ 0.1
VTI1A-208ENST00000494728 GNAT3A8MTJ3 354 aa15.66■□□□□ 0.1
VTI1A-208ENST00000494728 DPEP1P16444 411 aa15.66■□□□□ 0.1
VTI1A-208ENST00000494728 GAS2L2Q8NHY3 880 aa15.66■□□□□ 0.1
VTI1A-208ENST00000494728 ZNF496Q96IT1 587 aaPredicted RBP15.66■□□□□ 0.1
VTI1A-208ENST00000494728 LAMB4A4D0S4 1761 aa15.66■□□□□ 0.1
VTI1A-208ENST00000494728 KDM3BQ7LBC6 1761 aa15.66■□□□□ 0.1
VTI1A-208ENST00000494728 USPL1Q5W0Q7 1092 aa15.65■□□□□ 0.1
VTI1A-208ENST00000494728 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
VTI1A-208ENST00000494728 PARP3Q9Y6F1 533 aa15.65■□□□□ 0.1
VTI1A-208ENST00000494728 HEG1Q9ULI3 1381 aa15.64■□□□□ 0.09
VTI1A-208ENST00000494728 POLRMTO00411 1230 aaKnown RBP15.64■□□□□ 0.09
VTI1A-208ENST00000494728 KCNQ3O43525 872 aa15.64■□□□□ 0.09
VTI1A-208ENST00000494728 KCNA3P22001 575 aa15.64■□□□□ 0.09
VTI1A-208ENST00000494728 CACNA1SQ13698 1873 aa15.64■□□□□ 0.09
VTI1A-208ENST00000494728 CARMIL3Q8ND23 1372 aa15.63■□□□□ 0.09
VTI1A-208ENST00000494728 TM4SF1P30408 202 aa15.63■□□□□ 0.09
VTI1A-208ENST00000494728 C1QTNF8P60827 252 aa15.63■□□□□ 0.09
VTI1A-208ENST00000494728 TGFB2P61812 414 aa15.63■□□□□ 0.09
VTI1A-208ENST00000494728 TEFQ10587 303 aa15.63■□□□□ 0.09
VTI1A-208ENST00000494728 ZNF790Q6PG37 636 aa15.63■□□□□ 0.09
VTI1A-208ENST00000494728 VSIG10Q8N0Z9 540 aa15.63■□□□□ 0.09
VTI1A-208ENST00000494728 CFAP53Q96M91 514 aa15.63■□□□□ 0.09
VTI1A-208ENST00000494728 GIGYF1O75420 1035 aaPredicted RBP15.62■□□□□ 0.09
VTI1A-208ENST00000494728 U2AF1L5P0DN76 240 aaPredicted RBP15.62■□□□□ 0.09
VTI1A-208ENST00000494728 CANXP27824 592 aaKnown RBP15.62■□□□□ 0.09
VTI1A-208ENST00000494728 U2AF1Q01081 240 aaKnown RBP eCLIP15.62■□□□□ 0.09
VTI1A-208ENST00000494728 TTC5Q8N0Z6 440 aa15.62■□□□□ 0.09
VTI1A-208ENST00000494728 NARFQ9UHQ1 456 aa15.62■□□□□ 0.09
VTI1A-208ENST00000494728 BCS1LQ9Y276 419 aa15.62■□□□□ 0.09
VTI1A-208ENST00000494728 CCDC88AQ3V6T2 1871 aa15.61■□□□□ 0.09
VTI1A-208ENST00000494728 CHRNA5P30532 468 aa15.61■□□□□ 0.09
VTI1A-208ENST00000494728 NFIXQ14938 502 aa15.61■□□□□ 0.09
VTI1A-208ENST00000494728 ZNF526Q8TF50 670 aaPredicted RBP15.61■□□□□ 0.09
VTI1A-208ENST00000494728 PRAMEF22A3QJZ6 481 aa15.6■□□□□ 0.09
VTI1A-208ENST00000494728 EIF5P55010 431 aaKnown RBP15.6■□□□□ 0.09
VTI1A-208ENST00000494728 DCTN1Q14203 1278 aa15.6■□□□□ 0.09
VTI1A-208ENST00000494728 MCM10Q7L590 875 aa15.6■□□□□ 0.09
VTI1A-208ENST00000494728 ZPR1O75312 459 aa15.59■□□□□ 0.09
VTI1A-208ENST00000494728 TIAM2Q8IVF5 1701 aa15.59■□□□□ 0.09
VTI1A-208ENST00000494728 FCHSD2O94868 740 aa15.58■□□□□ 0.08
VTI1A-208ENST00000494728 NUDCQ9Y266 331 aa15.58■□□□□ 0.08
VTI1A-208ENST00000494728 ARFGEF2Q9Y6D5 1785 aa15.57■□□□□ 0.08
VTI1A-208ENST00000494728 SENP3-EIF4A1A0A087X0R7 540 aa15.57■□□□□ 0.08
VTI1A-208ENST00000494728 BTBD11A6QL63 1104 aa15.57■□□□□ 0.08
VTI1A-208ENST00000494728 A1BGP04217 495 aa15.57■□□□□ 0.08
VTI1A-208ENST00000494728 PIP4K2AP48426 406 aaPredicted RBP15.57■□□□□ 0.08
VTI1A-208ENST00000494728 FMNL2Q96PY5 1086 aa15.57■□□□□ 0.08
VTI1A-208ENST00000494728 STARD3NLO95772 234 aa15.56■□□□□ 0.08
VTI1A-208ENST00000494728 GPBP1L1Q9HC44 474 aaPredicted RBP15.56■□□□□ 0.08
VTI1A-208ENST00000494728 TBC1D9BQ66K14 1250 aa15.55■□□□□ 0.08
VTI1A-208ENST00000494728 BICDL1Q6ZP65 573 aa15.55■□□□□ 0.08
VTI1A-208ENST00000494728 TBC1D2BQ9UPU7 963 aa15.55■□□□□ 0.08
VTI1A-208ENST00000494728 ZNF330Q9Y3S2 320 aaPredicted RBP15.55■□□□□ 0.08
VTI1A-208ENST00000494728 FER1L6Q2WGJ9 1857 aa15.54■□□□□ 0.08
VTI1A-208ENST00000494728 SERPINB2P05120 415 aa15.54■□□□□ 0.08
VTI1A-208ENST00000494728 ARHGAP27Q6ZUM4 889 aa15.54■□□□□ 0.08
VTI1A-208ENST00000494728 PIM2Q9P1W9 311 aa15.54■□□□□ 0.08
VTI1A-208ENST00000494728 USP16Q9Y5T5 823 aa15.54■□□□□ 0.08
VTI1A-208ENST00000494728 NUP98P52948 1817 aa15.54■□□□□ 0.08
VTI1A-208ENST00000494728 SLX4Q8IY92 1834 aa15.53■□□□□ 0.08
VTI1A-208ENST00000494728 IL6STP40189 918 aaPredicted RBP15.53■□□□□ 0.08
VTI1A-208ENST00000494728 DALRD3Q5D0E6 543 aaKnown RBP15.53■□□□□ 0.08
VTI1A-208ENST00000494728 CCDC24Q8N4L8 307 aa15.53■□□□□ 0.08
VTI1A-208ENST00000494728 PLEKHF1Q96S99 279 aa15.53■□□□□ 0.08
VTI1A-208ENST00000494728 TNRC6CQ9HCJ0 1690 aaKnown RBP15.53■□□□□ 0.08
VTI1A-208ENST00000494728 PCNTO95613 3336 aa15.53■□□□□ 0.08
VTI1A-208ENST00000494728 KIF3CO14782 793 aa15.52■□□□□ 0.08
VTI1A-208ENST00000494728 CAMTA2O94983 1202 aa15.52■□□□□ 0.08
VTI1A-208ENST00000494728 MIS18AQ9NYP9 233 aa15.52■□□□□ 0.08
VTI1A-208ENST00000494728 DICER1Q9UPY3 1922 aaKnown RBP15.52■□□□□ 0.07
VTI1A-208ENST00000494728 NBPF26B4DH59 902 aa15.51■□□□□ 0.07
VTI1A-208ENST00000494728 PRELPP51888 382 aa15.51■□□□□ 0.07
VTI1A-208ENST00000494728 RASSF7Q02833 373 aa15.51■□□□□ 0.07
VTI1A-208ENST00000494728 NBPF10Q6P3W6 841 aaKnown RBP15.51■□□□□ 0.07
VTI1A-208ENST00000494728 NBPF15Q8N660 670 aa15.51■□□□□ 0.07
VTI1A-208ENST00000494728 RTF1Q92541 710 aaKnown RBP15.51■□□□□ 0.07
VTI1A-208ENST00000494728 THUMPD2Q9BTF0 503 aaKnown RBP15.51■□□□□ 0.07
VTI1A-208ENST00000494728 TEX13AQ9BXU3 409 aaPredicted RBP15.51■□□□□ 0.07
VTI1A-208ENST00000494728 A0A087WZG4 1122 aa15.5■□□□□ 0.07
VTI1A-208ENST00000494728 C9orf131Q5VYM1 1079 aa15.5■□□□□ 0.07
VTI1A-208ENST00000494728 PRR5LQ6MZQ0 368 aa15.5■□□□□ 0.07
VTI1A-208ENST00000494728 HTATSF1O43719 755 aaKnown RBP15.49■□□□□ 0.07
VTI1A-208ENST00000494728 SNRPA1P09661 255 aaKnown RBP15.48■□□□□ 0.07
VTI1A-208ENST00000494728 DZIP3Q86Y13 1208 aaKnown RBP15.48■□□□□ 0.07
VTI1A-208ENST00000494728 C2CD5Q86YS7 1000 aa15.48■□□□□ 0.07
VTI1A-208ENST00000494728 NMRK2Q9NPI5 230 aa15.48■□□□□ 0.07
VTI1A-208ENST00000494728 NFE2L2Q16236 605 aa15.47■□□□□ 0.07
VTI1A-208ENST00000494728 RNF181Q9P0P0 153 aa15.47■□□□□ 0.07
VTI1A-208ENST00000494728 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
VTI1A-208ENST00000494728 TAF7Q15545 349 aaPredicted RBP15.46■□□□□ 0.07
VTI1A-208ENST00000494728 WDR90Q96KV7 1748 aa15.46■□□□□ 0.06
VTI1A-208ENST00000494728 ANKRD36CQ5JPF3 1778 aa15.45■□□□□ 0.06
VTI1A-208ENST00000494728 NFKBIEO00221 500 aa15.45■□□□□ 0.06
VTI1A-208ENST00000494728 TTLL6Q8N841 843 aa15.44■□□□□ 0.06
VTI1A-208ENST00000494728 CNBD1Q8NA66 436 aa15.44■□□□□ 0.06
VTI1A-208ENST00000494728 H0YIN7 160 aa15.43■□□□□ 0.06
VTI1A-208ENST00000494728 EIF4A1P60842 406 aaKnown RBP15.43■□□□□ 0.06
VTI1A-208ENST00000494728 HLFQ16534 295 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms