RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 ANKRD50Q9ULJ7 1429 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 A2MP01023 1474 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 PTPRMP28827 1452 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 GOLGA6L22H0YM25 854 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 CD46P15529 392 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 SSTR3P32745 418 aaPredicted RBP3.36□□□□□ -1.87
MDC1-208ENST00000494654 PPP4CP60510 307 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 XPCQ01831 940 aaPredicted RBP3.36□□□□□ -1.87
MDC1-208ENST00000494654 FUT2Q10981 343 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 FBXO31Q5XUX0 539 aaPredicted RBP3.36□□□□□ -1.87
MDC1-208ENST00000494654 BLOC1S3Q6QNY0 202 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 RDH13Q8NBN7 331 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 RGS22Q8NE09 1264 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 PMFBP1Q8TBY8 1022 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 ANKRD7Q92527 254 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 TNPO1Q92973 898 aaKnown RBP3.36□□□□□ -1.87
MDC1-208ENST00000494654 CLUAP1Q96AJ1 413 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 FEZ1Q99689 392 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 FAM117AQ9C073 453 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 GLI2P10070 1586 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 SAMD9LQ8IVG5 1584 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 ANKRD36BQ8N2N9 1353 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 FMN2Q9NZ56 1722 aa3.36□□□□□ -1.87
MDC1-208ENST00000494654 TRPM2O94759 1503 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 ZCCHC11Q5TAX3 1644 aaKnown RBP3.35□□□□□ -1.87
MDC1-208ENST00000494654 VGLL3A8MV65 326 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 TULP2O00295 520 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 RAPGEF3O95398 923 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 NDUFV2P19404 249 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 MMP14P50281 582 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 BRPF1P55201 1214 aaPredicted RBP3.35□□□□□ -1.87
MDC1-208ENST00000494654 FKBP5Q13451 457 aaPredicted RBP3.35□□□□□ -1.87
MDC1-208ENST00000494654 PDE3AQ14432 1141 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 ATP2B3Q16720 1220 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 TJAP1Q5JTD0 557 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 DNTTIP2Q5QJE6 756 aaKnown RBP3.35□□□□□ -1.87
MDC1-208ENST00000494654 AXDND1Q5T1B0 1012 aaPredicted RBP3.35□□□□□ -1.87
MDC1-208ENST00000494654 TRMT2AQ8IZ69 625 aaKnown RBP3.35□□□□□ -1.87
MDC1-208ENST00000494654 PDCL2Q8N4E4 241 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 NGEFQ8N5V2 710 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 PIBF1Q8WXW3 757 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 SYMPKQ92797 1274 aaKnown RBP3.35□□□□□ -1.87
MDC1-208ENST00000494654 MTRQ99707 1265 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 KDM4CQ9H3R0 1056 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 GPCPD1Q9NPB8 672 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 CALCOCO1Q9P1Z2 691 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 BCCIPQ9P287 314 aaKnown RBP eCLIP3.35□□□□□ -1.87
MDC1-208ENST00000494654 CGNQ9P2M7 1197 aaKnown RBP3.35□□□□□ -1.87
MDC1-208ENST00000494654 HCSTQ9UBK5 93 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 KIF16BQ96L93 1317 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 KANK1Q14678 1352 aa3.35□□□□□ -1.87
MDC1-208ENST00000494654 SETD1BQ9UPS6 1966 aaKnown RBP3.34□□□□□ -1.87
MDC1-208ENST00000494654 ABCA8O94911 1581 aa3.34□□□□□ -1.87
MDC1-208ENST00000494654 SETBP1Q9Y6X0 1596 aa3.34□□□□□ -1.87
MDC1-208ENST00000494654 DDX60Q8IY21 1712 aaKnown RBP3.34□□□□□ -1.87
MDC1-208ENST00000494654 PLEKHG3A1L390 1219 aa3.34□□□□□ -1.87
MDC1-208ENST00000494654 GCGRP47871 477 aa3.34□□□□□ -1.87
MDC1-208ENST00000494654 CEBPAP49715 358 aaPredicted RBP3.34□□□□□ -1.87
MDC1-208ENST00000494654 MFAP1P55081 439 aaKnown RBP3.34□□□□□ -1.87
MDC1-208ENST00000494654 CBX1P83916 185 aa3.34□□□□□ -1.87
MDC1-208ENST00000494654 ZNF771Q7L3S4 317 aaPredicted RBP3.34□□□□□ -1.87
MDC1-208ENST00000494654 SECISBP2LQ93073 1101 aaKnown RBP3.34□□□□□ -1.87
MDC1-208ENST00000494654 ZNF622Q969S3 477 aaKnown RBP eCLIP3.34□□□□□ -1.871e-7■□□□□ 11.1
MDC1-208ENST00000494654 TIGD1Q96MW7 591 aa3.34□□□□□ -1.87
MDC1-208ENST00000494654 ARID3AQ99856 593 aa3.34□□□□□ -1.87
MDC1-208ENST00000494654 BEGAINQ9BUH8 593 aa3.34□□□□□ -1.87
MDC1-208ENST00000494654 C22orf23Q9BZE7 217 aa3.34□□□□□ -1.87
MDC1-208ENST00000494654 GEMIN8Q9NWZ8 242 aaKnown RBP3.34□□□□□ -1.87
MDC1-208ENST00000494654 OGFRQ9NZT2 677 aa3.34□□□□□ -1.87
MDC1-208ENST00000494654 PCDHGC3Q9UN70 934 aa3.34□□□□□ -1.87
MDC1-208ENST00000494654 RAD50Q92878 1312 aa3.34□□□□□ -1.87
MDC1-208ENST00000494654 MYH8P13535 1937 aa3.34□□□□□ -1.88
MDC1-208ENST00000494654 FANCAO15360 1455 aa3.34□□□□□ -1.88
MDC1-208ENST00000494654 MAP2P11137 1827 aaKnown RBP3.33□□□□□ -1.88
MDC1-208ENST00000494654 MOXD2PA6NHM9 499 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 CTIFO43310 598 aaKnown RBP3.33□□□□□ -1.88
MDC1-208ENST00000494654 CYP2E1P05181 493 aaPredicted RBP3.33□□□□□ -1.88
MDC1-208ENST00000494654 SLFN5Q08AF3 891 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 NEUROD2Q15784 382 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 ZSCAN23Q3MJ62 389 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 CTR9Q6PD62 1173 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 LRSAM1Q6UWE0 723 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 RNF19BQ6ZMZ0 732 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 SLF2Q8IX21 1173 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 SPIRE2Q8WWL2 714 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 EFCC1Q9HA90 598 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 PRDM9Q9NQV7 894 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 DIAPH3Q9NSV4 1193 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 SPTLC3Q9NUV7 552 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 SLC27A5Q9Y2P5 690 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.33□□□□□ -1.88
MDC1-208ENST00000494654 NUP153P49790 1475 aaKnown RBP3.33□□□□□ -1.88
MDC1-208ENST00000494654 EFCAB6Q5THR3 1501 aa3.33□□□□□ -1.88
MDC1-208ENST00000494654 XRN1Q8IZH2 1706 aaKnown RBP3.33□□□□□ -1.88
MDC1-208ENST00000494654 E9PSI1 815 aa3.32□□□□□ -1.88
MDC1-208ENST00000494654 K7ELQ4 463 aaPredicted RBP3.32□□□□□ -1.88
MDC1-208ENST00000494654 PPEF1O14829 653 aaPredicted RBP3.32□□□□□ -1.88
MDC1-208ENST00000494654 CLGNO14967 610 aa3.32□□□□□ -1.88
MDC1-208ENST00000494654 ACTN4O43707 911 aaKnown RBP3.32□□□□□ -1.88
MDC1-208ENST00000494654 BAG4O95429 457 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms