RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 ITGB7P26010 798 aa9.18□□□□□ -0.94
SMC4-224ENST00000494612 SCNN1DP51172 638 aa9.18□□□□□ -0.94
SMC4-224ENST00000494612 KRTAP1-3Q8IUG1 177 aa9.18□□□□□ -0.94
SMC4-224ENST00000494612 GDPD2Q9HCC8 539 aa9.18□□□□□ -0.94
SMC4-224ENST00000494612 ARAFP10398 606 aa9.17□□□□□ -0.94
SMC4-224ENST00000494612 OXLD1Q5BKU9 147 aa9.17□□□□□ -0.94
SMC4-224ENST00000494612 SIRT1Q96EB6 747 aa9.17□□□□□ -0.94
SMC4-224ENST00000494612 CRISPLD1Q9H336 500 aa9.17□□□□□ -0.94
SMC4-224ENST00000494612 INHAP05111 366 aa9.16□□□□□ -0.94
SMC4-224ENST00000494612 GATA4P43694 442 aa9.16□□□□□ -0.94
SMC4-224ENST00000494612 CTBSQ01459 385 aa9.16□□□□□ -0.94
SMC4-224ENST00000494612 TLR1Q15399 786 aa9.16□□□□□ -0.94
SMC4-224ENST00000494612 NEURL1BA8MQ27 555 aa9.15□□□□□ -0.94
SMC4-224ENST00000494612 BNIP3LO60238 219 aa9.15□□□□□ -0.94
SMC4-224ENST00000494612 MAP7D1Q3KQU3 841 aa9.15□□□□□ -0.94
SMC4-224ENST00000494612 TIMELESSQ9UNS1 1208 aa9.15□□□□□ -0.94
SMC4-224ENST00000494612 WASHC4Q2M389 1173 aa9.14□□□□□ -0.95
SMC4-224ENST00000494612 CHSY3Q70JA7 882 aa9.14□□□□□ -0.95
SMC4-224ENST00000494612 ZNF295-AS1Q8N0V1 137 aa9.14□□□□□ -0.95
SMC4-224ENST00000494612 DNAAF2Q9NVR5 837 aaKnown RBP9.14□□□□□ -0.95
SMC4-224ENST00000494612 ABL2P42684 1182 aa9.13□□□□□ -0.95
SMC4-224ENST00000494612 GDF10P55107 478 aa9.13□□□□□ -0.95
SMC4-224ENST00000494612 FIGNL1Q6PIW4 674 aa9.13□□□□□ -0.95
SMC4-224ENST00000494612 PLPP7Q8NBV4 271 aa9.13□□□□□ -0.95
SMC4-224ENST00000494612 ATP4AP20648 1035 aa9.12□□□□□ -0.95
SMC4-224ENST00000494612 SMTNP53814 917 aa9.12□□□□□ -0.95
SMC4-224ENST00000494612 SLC4A9Q96Q91 983 aa9.12□□□□□ -0.95
SMC4-224ENST00000494612 TMEM229AB2RXF0 380 aa9.11□□□□□ -0.95
SMC4-224ENST00000494612 PLA2G4AP47712 749 aa9.11□□□□□ -0.95
SMC4-224ENST00000494612 TBC1D9Q6ZT07 1266 aa9.11□□□□□ -0.95
SMC4-224ENST00000494612 C1orf216Q8TAB5 229 aa9.11□□□□□ -0.95
SMC4-224ENST00000494612 ZCCHC2Q9C0B9 1178 aaKnown RBP9.11□□□□□ -0.95
SMC4-224ENST00000494612 HCN2Q9UL51 889 aa9.11□□□□□ -0.95
SMC4-224ENST00000494612 SPATA31C1P0DKV0 1188 aa9.1□□□□□ -0.95
SMC4-224ENST00000494612 ADH6P28332 368 aa9.1□□□□□ -0.95
SMC4-224ENST00000494612 SOX11P35716 441 aa9.1□□□□□ -0.95
SMC4-224ENST00000494612 NLRP8Q86W28 1048 aa9.1□□□□□ -0.95
SMC4-224ENST00000494612 NIFKQ9BYG3 293 aaKnown RBP9.1□□□□□ -0.95
SMC4-224ENST00000494612 IQSEC3Q9UPP2 1182 aaPredicted RBP9.1□□□□□ -0.95
SMC4-224ENST00000494612 PCDHGC4Q9Y5F7 938 aa9.1□□□□□ -0.95
SMC4-224ENST00000494612 PCDHGA11Q9Y5H2 935 aa9.1□□□□□ -0.95
SMC4-224ENST00000494612 CDK2AP1O14519 115 aa9.09□□□□□ -0.95
SMC4-224ENST00000494612 SEMA3FQ13275 785 aa9.09□□□□□ -0.95
SMC4-224ENST00000494612 MCM6Q14566 821 aa9.09□□□□□ -0.95
SMC4-224ENST00000494612 MTFR1Q15390 333 aa9.09□□□□□ -0.95
SMC4-224ENST00000494612 C14orf37Q86TY3 774 aa9.09□□□□□ -0.95
SMC4-224ENST00000494612 LCE3BQ5TA77 95 aa9.08□□□□□ -0.96
SMC4-224ENST00000494612 PLVAPQ9BX97 442 aa9.08□□□□□ -0.96
SMC4-224ENST00000494612 ZFP64Q9NPA5 681 aa9.08□□□□□ -0.96
SMC4-224ENST00000494612 A6NJY4 79 aa9.07□□□□□ -0.96
SMC4-224ENST00000494612 PIK3CDO00329 1044 aa9.07□□□□□ -0.96
SMC4-224ENST00000494612 RSPO4Q2I0M5 234 aaPredicted RBP9.07□□□□□ -0.96
SMC4-224ENST00000494612 NBPF11Q86T75 865 aa9.07□□□□□ -0.96
SMC4-224ENST00000494612 SPDYE3A6NKU9 549 aa9.06□□□□□ -0.96
SMC4-224ENST00000494612 AIDAQ96BJ3 306 aa9.06□□□□□ -0.96
SMC4-224ENST00000494612 AVENQ9NQS1 362 aaPredicted RBP9.06□□□□□ -0.96
SMC4-224ENST00000494612 SERTAD1Q9UHV2 236 aa9.06□□□□□ -0.96
SMC4-224ENST00000494612 USP3Q9Y6I4 520 aa9.06□□□□□ -0.96
SMC4-224ENST00000494612 A0A1W2PNR3 127 aa9.05□□□□□ -0.96
SMC4-224ENST00000494612 ATXN7O15265 892 aaPredicted RBP9.05□□□□□ -0.96
SMC4-224ENST00000494612 TNP2Q05952 138 aa9.05□□□□□ -0.96
SMC4-224ENST00000494612 ARTNQ5T4W7 220 aa9.05□□□□□ -0.96
SMC4-224ENST00000494612 TRIM11Q96F44 468 aa9.05□□□□□ -0.96
SMC4-224ENST00000494612 ALG2Q9H553 416 aa9.05□□□□□ -0.96
SMC4-224ENST00000494612 KLF15Q9UIH9 416 aa9.05□□□□□ -0.96
SMC4-224ENST00000494612 COG6Q9Y2V7 657 aa9.05□□□□□ -0.96
SMC4-224ENST00000494612 APBA3O96018 575 aa9.04□□□□□ -0.96
SMC4-224ENST00000494612 PRRT3Q5FWE3 981 aa9.04□□□□□ -0.96
SMC4-224ENST00000494612 FAM182BQ5T319 152 aa9.04□□□□□ -0.96
SMC4-224ENST00000494612 ZIC5Q96T25 663 aa9.04□□□□□ -0.96
SMC4-224ENST00000494612 ZDHHC3Q9NYG2 299 aa9.04□□□□□ -0.96
SMC4-224ENST00000494612 MAPTP10636 758 aaKnown RBP9.03□□□□□ -0.96
SMC4-224ENST00000494612 NKAPLQ5M9Q1 402 aa9.03□□□□□ -0.96
SMC4-224ENST00000494612 FCHSD1Q86WN1 690 aa9.03□□□□□ -0.96
SMC4-224ENST00000494612 FOXD4L6Q3SYB3 417 aaPredicted RBP9.02□□□□□ -0.97
SMC4-224ENST00000494612 ARSJQ5FYB0 599 aaPredicted RBP9.02□□□□□ -0.97
SMC4-224ENST00000494612 FOXD4L3Q6VB84 417 aaPredicted RBP9.02□□□□□ -0.97
SMC4-224ENST00000494612 NFATC2IPQ8NCF5 419 aa9.02□□□□□ -0.97
SMC4-224ENST00000494612 KRTAP4-12Q9BQ66 201 aa9.02□□□□□ -0.97
SMC4-224ENST00000494612 TPSG1Q9NRR2 321 aa9.02□□□□□ -0.97
SMC4-224ENST00000494612 PRR12Q9ULL5 1215 aa9.02□□□□□ -0.97
SMC4-224ENST00000494612 DCDC2BA2VCK2 349 aa9.01□□□□□ -0.97
SMC4-224ENST00000494612 DYRK3O43781 588 aa9.01□□□□□ -0.97
SMC4-224ENST00000494612 LZTS3O60299 673 aaPredicted RBP9.01□□□□□ -0.97
SMC4-224ENST00000494612 CD33P20138 364 aa9.01□□□□□ -0.97
SMC4-224ENST00000494612 NBPF1Q3BBV0 1214 aa9.01□□□□□ -0.97
SMC4-224ENST00000494612 KHNYNO15037 678 aaKnown RBP9□□□□□ -0.97
SMC4-224ENST00000494612 ALAS2P22557 587 aa9□□□□□ -0.97
SMC4-224ENST00000494612 SCHIP1Q9P0W5 487 aaPredicted RBP9□□□□□ -0.97
SMC4-224ENST00000494612 BTBD11A6QL63 1104 aa8.99□□□□□ -0.97
SMC4-224ENST00000494612 FAM157BP0CG42 384 aa8.99□□□□□ -0.97
SMC4-224ENST00000494612 SKIP12755 728 aa8.99□□□□□ -0.97
SMC4-224ENST00000494612 TATP17735 454 aaPredicted RBP8.99□□□□□ -0.97
SMC4-224ENST00000494612 PCBP4P57723 403 aaKnown RBP8.99□□□□□ -0.97
SMC4-224ENST00000494612 EML3Q32P44 896 aa8.99□□□□□ -0.97
SMC4-224ENST00000494612 SAMD5Q5TGI4 173 aa8.99□□□□□ -0.97
SMC4-224ENST00000494612 ZDHHC1Q8WTX9 485 aa8.99□□□□□ -0.97
SMC4-224ENST00000494612 C7orf43Q8WVR3 580 aa8.99□□□□□ -0.97
SMC4-224ENST00000494612 CABP1Q9NZU7 370 aa8.99□□□□□ -0.97
SMC4-224ENST00000494612 NOD1Q9Y239 953 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms