RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 PCDHB9Q9Y5E1 797 aa9.03□□□□□ -0.96
SNX13-210ENST00000494402 LYPD8Q6UX82 237 aa9.02□□□□□ -0.97
SNX13-210ENST00000494402 CAPN12Q6ZSI9 719 aa9.02□□□□□ -0.97
SNX13-210ENST00000494402 RETREG3Q86VR2 466 aa9.02□□□□□ -0.97
SNX13-210ENST00000494402 SYMPKQ92797 1274 aaKnown RBP9.02□□□□□ -0.97
SNX13-210ENST00000494402 RNPC3Q96LT9 517 aaKnown RBP9.02□□□□□ -0.97
SNX13-210ENST00000494402 RPS6KC1Q96S38 1066 aa9.02□□□□□ -0.97
SNX13-210ENST00000494402 KCNK17Q96T54 332 aa9.02□□□□□ -0.97
SNX13-210ENST00000494402 WWC3Q9ULE0 1092 aa9.02□□□□□ -0.97
SNX13-210ENST00000494402 ATF4P18848 351 aaPredicted RBP9.01□□□□□ -0.97
SNX13-210ENST00000494402 GNA15P30679 374 aa9.01□□□□□ -0.97
SNX13-210ENST00000494402 GJA8P48165 433 aa9.01□□□□□ -0.97
SNX13-210ENST00000494402 AMPD3Q01432 767 aa9.01□□□□□ -0.97
SNX13-210ENST00000494402 FOXD4L6Q3SYB3 417 aaPredicted RBP9.01□□□□□ -0.97
SNX13-210ENST00000494402 VARS2Q5ST30 1063 aaKnown RBP9.01□□□□□ -0.97
SNX13-210ENST00000494402 ZFYVE27Q5T4F4 411 aa9.01□□□□□ -0.97
SNX13-210ENST00000494402 ALG1LQ6GMV1 187 aa9.01□□□□□ -0.97
SNX13-210ENST00000494402 FOXD4L3Q6VB84 417 aaPredicted RBP9.01□□□□□ -0.97
SNX13-210ENST00000494402 C3orf80F5H4A9 247 aa9□□□□□ -0.97
SNX13-210ENST00000494402 PAX3P23760 479 aa9□□□□□ -0.97
SNX13-210ENST00000494402 MPSTP25325 297 aa9□□□□□ -0.97
SNX13-210ENST00000494402 NAA30Q147X3 362 aaPredicted RBP9□□□□□ -0.97
SNX13-210ENST00000494402 ODR4Q5SWX8 454 aa9□□□□□ -0.97
SNX13-210ENST00000494402 HS2ST1Q7LGA3 356 aa9□□□□□ -0.97
SNX13-210ENST00000494402 NME8Q8N427 588 aa9□□□□□ -0.97
SNX13-210ENST00000494402 ALKBH8Q96BT7 664 aaKnown RBP9□□□□□ -0.97
SNX13-210ENST00000494402 GPSM3Q9Y4H4 160 aa9□□□□□ -0.97
SNX13-210ENST00000494402 TRIM6-TRIM34B2RNG4 842 aa8.99□□□□□ -0.97
SNX13-210ENST00000494402 PTPN12Q05209 780 aaKnown RBP8.99□□□□□ -0.97
SNX13-210ENST00000494402 PTK2Q05397 1052 aa8.99□□□□□ -0.97
SNX13-210ENST00000494402 PACS2Q86VP3 889 aa8.99□□□□□ -0.97
SNX13-210ENST00000494402 TMTC2Q8N394 836 aa8.99□□□□□ -0.97
SNX13-210ENST00000494402 PNISRQ8TF01 805 aaKnown RBP8.99□□□□□ -0.97
SNX13-210ENST00000494402 C8orf48Q96LL4 319 aa8.99□□□□□ -0.97
SNX13-210ENST00000494402 SRPK1Q96SB4 655 aaKnown RBP8.99□□□□□ -0.97
SNX13-210ENST00000494402 MAF1Q9H063 256 aa8.99□□□□□ -0.97
SNX13-210ENST00000494402 SRA1Q9HD15 236 aaKnown RBP8.99□□□□□ -0.97
SNX13-210ENST00000494402 DOLKQ9UPQ8 538 aa8.99□□□□□ -0.97
SNX13-210ENST00000494402 LGR5O75473 907 aa8.98□□□□□ -0.97
SNX13-210ENST00000494402 SLC10A3P09131 477 aa8.98□□□□□ -0.97
SNX13-210ENST00000494402 ALKBH2Q6NS38 261 aa8.98□□□□□ -0.97
SNX13-210ENST00000494402 CEP89Q96ST8 783 aa8.98□□□□□ -0.97
SNX13-210ENST00000494402 FAM129BQ96TA1 746 aa8.98□□□□□ -0.97
SNX13-210ENST00000494402 SIRPGQ9P1W8 387 aa8.98□□□□□ -0.97
SNX13-210ENST00000494402 CDC45O75419 566 aa8.97□□□□□ -0.97
SNX13-210ENST00000494402 FUT2Q10981 343 aa8.97□□□□□ -0.97
SNX13-210ENST00000494402 ENOX2Q16206 610 aaKnown RBP8.97□□□□□ -0.97
SNX13-210ENST00000494402 CCSAPQ6IQ19 270 aaPredicted RBP8.97□□□□□ -0.97
SNX13-210ENST00000494402 GPATCH11Q8N954 259 aa8.97□□□□□ -0.97
SNX13-210ENST00000494402 RELTQ969Z4 430 aa8.97□□□□□ -0.97
SNX13-210ENST00000494402 ARHGAP33O14559 1287 aa8.96□□□□□ -0.98
SNX13-210ENST00000494402 GPR182O15218 404 aa8.96□□□□□ -0.98
SNX13-210ENST00000494402 ZBTB24O43167 697 aaPredicted RBP8.96□□□□□ -0.98
SNX13-210ENST00000494402 IGHA2P01877 340 aa8.96□□□□□ -0.98
SNX13-210ENST00000494402 PSEN2P49810 448 aa8.96□□□□□ -0.98
SNX13-210ENST00000494402 AAMPQ13685 434 aa8.96□□□□□ -0.98
SNX13-210ENST00000494402 PROX2Q3B8N5 592 aa8.96□□□□□ -0.98
SNX13-210ENST00000494402 OXLD1Q5BKU9 147 aa8.96□□□□□ -0.98
SNX13-210ENST00000494402 ARSHQ5FYA8 562 aa8.96□□□□□ -0.98
SNX13-210ENST00000494402 PURBQ96QR8 312 aaKnown RBP8.96□□□□□ -0.98
SNX13-210ENST00000494402 SETDB2Q96T68 719 aa8.96□□□□□ -0.98
SNX13-210ENST00000494402 ZBED2Q9BTP6 218 aa8.96□□□□□ -0.98
SNX13-210ENST00000494402 BSDC1Q9NW68 430 aaPredicted RBP8.96□□□□□ -0.98
SNX13-210ENST00000494402 AK5Q9Y6K8 562 aa8.96□□□□□ -0.98
SNX13-210ENST00000494402 PNMA6FA0A0J9YX94 578 aa8.95□□□□□ -0.98
SNX13-210ENST00000494402 M0R2N6 131 aa8.95□□□□□ -0.98
SNX13-210ENST00000494402 GIGYF1O75420 1035 aaPredicted RBP8.95□□□□□ -0.98
SNX13-210ENST00000494402 PBX2P40425 430 aa8.95□□□□□ -0.98
SNX13-210ENST00000494402 CHMP4BP1P59074 171 aa8.95□□□□□ -0.98
SNX13-210ENST00000494402 TSGA10IPQ3SY00 556 aa8.95□□□□□ -0.98
SNX13-210ENST00000494402 RNF20Q5VTR2 975 aa8.95□□□□□ -0.98
SNX13-210ENST00000494402 FERMT3Q86UX7 667 aa8.95□□□□□ -0.98
SNX13-210ENST00000494402 GPRASP2Q96D09 838 aa8.95□□□□□ -0.98
SNX13-210ENST00000494402 PRDM10Q9NQV6 1147 aa8.95□□□□□ -0.98
SNX13-210ENST00000494402 TCEAL9Q9UHQ7 104 aa8.95□□□□□ -0.98
SNX13-210ENST00000494402 GGT7Q9UJ14 662 aa8.95□□□□□ -0.98
SNX13-210ENST00000494402 PNMA2Q9UL42 364 aa8.95□□□□□ -0.98
SNX13-210ENST00000494402 TTF2Q9UNY4 1162 aaKnown RBP8.95□□□□□ -0.98
SNX13-210ENST00000494402 FOXO3O43524 673 aa8.94□□□□□ -0.98
SNX13-210ENST00000494402 CTSHP09668 335 aa8.94□□□□□ -0.98
SNX13-210ENST00000494402 ATP6V1AP38606 617 aa8.94□□□□□ -0.98
SNX13-210ENST00000494402 PAK2Q13177 524 aa8.94□□□□□ -0.98
SNX13-210ENST00000494402 OS9Q13438 667 aaPredicted RBP8.94□□□□□ -0.98
SNX13-210ENST00000494402 ZNF687Q8N1G0 1237 aa8.94□□□□□ -0.98
SNX13-210ENST00000494402 FBF1Q8TES7 1133 aa8.94□□□□□ -0.98
SNX13-210ENST00000494402 CCDC87Q9NVE4 849 aa8.94□□□□□ -0.98
SNX13-210ENST00000494402 COMMD10Q9Y6G5 202 aa8.94□□□□□ -0.98
SNX13-210ENST00000494402 FZD6O60353 706 aa8.93□□□□□ -0.98
SNX13-210ENST00000494402 F12P00748 615 aaPredicted RBP8.93□□□□□ -0.98
SNX13-210ENST00000494402 SSBP05455 408 aaKnown RBP eCLIP8.93□□□□□ -0.98
SNX13-210ENST00000494402 UBE4AQ14139 1066 aa8.93□□□□□ -0.98
SNX13-210ENST00000494402 POTEEQ6S8J3 1075 aa8.93□□□□□ -0.98
SNX13-210ENST00000494402 TSEN2Q8NCE0 465 aaKnown RBP8.93□□□□□ -0.98
SNX13-210ENST00000494402 IER2Q9BTL4 223 aa8.93□□□□□ -0.98
SNX13-210ENST00000494402 SLC4A5Q9BY07 1137 aa8.93□□□□□ -0.98
SNX13-210ENST00000494402 TRIM55Q9BYV6 548 aa8.93□□□□□ -0.98
SNX13-210ENST00000494402 NEUROD4Q9HD90 331 aa8.93□□□□□ -0.98
SNX13-210ENST00000494402 GNL3LQ9NVN8 582 aaKnown RBP8.93□□□□□ -0.98
SNX13-210ENST00000494402 FANCLQ9NW38 375 aa8.93□□□□□ -0.98
SNX13-210ENST00000494402 PCDHGA11Q9Y5H2 935 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms