RNA–Protein interactions for RNA: ENST00000494275.5

FGD4-207, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 1,439 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-207ENST00000494275 GNAI1P63096 354 aa15.06■□□□□ 0
FGD4-207ENST00000494275 ZNF521Q96K83 1311 aa15.06■□□□□ 0
FGD4-207ENST00000494275 FMNL2Q96PY5 1086 aa15.06■□□□□ 0
FGD4-207ENST00000494275 SLC4A9Q96Q91 983 aa15.06■□□□□ 0
FGD4-207ENST00000494275 SIPA1L3O60292 1781 aaPredicted RBP15.05■□□□□ 0
FGD4-207ENST00000494275 HEG1Q9ULI3 1381 aa15.05■□□□□ -0
FGD4-207ENST00000494275 GRIN3BO60391 1043 aa15.05■□□□□ -0
FGD4-207ENST00000494275 ATP6V1AP38606 617 aa15.05■□□□□ -0
FGD4-207ENST00000494275 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
FGD4-207ENST00000494275 NLGN2Q8NFZ4 835 aa15.05■□□□□ -0
FGD4-207ENST00000494275 ZNF496Q96IT1 587 aaPredicted RBP15.05■□□□□ -0
FGD4-207ENST00000494275 ZNF831Q5JPB2 1677 aa15.04■□□□□ -0
FGD4-207ENST00000494275 PTCD1O75127 700 aaKnown RBP15.04■□□□□ -0
FGD4-207ENST00000494275 RC3H1Q5TC82 1133 aaKnown RBP15.04■□□□□ -0
FGD4-207ENST00000494275 RBM42Q9BTD8 480 aaKnown RBP15.04■□□□□ -0
FGD4-207ENST00000494275 VIRMAQ69YN4 1812 aaKnown RBP15.03■□□□□ -0
FGD4-207ENST00000494275 KCNQ3O43525 872 aa15.03■□□□□ -0
FGD4-207ENST00000494275 EIF4A1P60842 406 aaKnown RBP15.03■□□□□ -0
FGD4-207ENST00000494275 TSPYL4Q9UJ04 414 aa15.03■□□□□ -0
FGD4-207ENST00000494275 C4BP0C0L5 1744 aa15.03■□□□□ -0
FGD4-207ENST00000494275 ITPK1Q13572 414 aa15.02■□□□□ -0
FGD4-207ENST00000494275 COL23A1Q86Y22 540 aaPredicted RBP15.02■□□□□ -0
FGD4-207ENST00000494275 MIS18AQ9NYP9 233 aa15.02■□□□□ -0
FGD4-207ENST00000494275 KCPQ6ZWJ8 1503 aa15.02■□□□□ -0
FGD4-207ENST00000494275 SNRPA1P09661 255 aaKnown RBP15.01□□□□□ -0.01
FGD4-207ENST00000494275 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
FGD4-207ENST00000494275 YBX3P16989 372 aaKnown RBP eCLIP15□□□□□ -0.01
FGD4-207ENST00000494275 FLAD1Q8NFF5 587 aa15□□□□□ -0.01
FGD4-207ENST00000494275 MBIPQ9NS73 344 aa15□□□□□ -0.01
FGD4-207ENST00000494275 CICQ96RK0 1608 aaPredicted RBP15□□□□□ -0.01
FGD4-207ENST00000494275 SOS1Q07889 1333 aaPredicted RBP15□□□□□ -0.01
FGD4-207ENST00000494275 CNTNAP4Q9C0A0 1308 aa15□□□□□ -0.01
FGD4-207ENST00000494275 STARD3NLO95772 234 aa15□□□□□ -0.01
FGD4-207ENST00000494275 HOXB7P09629 217 aa15□□□□□ -0.01
FGD4-207ENST00000494275 CYP19A1P11511 503 aaPredicted RBP15□□□□□ -0.01
FGD4-207ENST00000494275 DNAJC10Q8IXB1 793 aa15□□□□□ -0.01
FGD4-207ENST00000494275 LINC00116Q8NCU8 138 aa15□□□□□ -0.01
FGD4-207ENST00000494275 UBR2Q8IWV8 1755 aa14.99□□□□□ -0.01
FGD4-207ENST00000494275 C1QBPQ07021 282 aaKnown RBP14.99□□□□□ -0.01
FGD4-207ENST00000494275 GOLGA2Q08379 1002 aa14.99□□□□□ -0.01
FGD4-207ENST00000494275 CHMP4AQ9BY43 222 aa14.99□□□□□ -0.01
FGD4-207ENST00000494275 SALL2Q9Y467 1007 aaPredicted RBP14.99□□□□□ -0.01
FGD4-207ENST00000494275 CD2APQ9Y5K6 639 aa14.99□□□□□ -0.01
FGD4-207ENST00000494275 MYH16Q9H6N6 1097 aa14.98□□□□□ -0.01
FGD4-207ENST00000494275 LAS1LQ9Y4W2 734 aaKnown RBP14.98□□□□□ -0.01
FGD4-207ENST00000494275 E9PSI1 815 aa14.97□□□□□ -0.01
FGD4-207ENST00000494275 RPS6KA4O75676 772 aa14.97□□□□□ -0.01
FGD4-207ENST00000494275 MSL1Q68DK7 614 aa14.97□□□□□ -0.01
FGD4-207ENST00000494275 USP16Q9Y5T5 823 aa14.97□□□□□ -0.01
FGD4-207ENST00000494275 KDM3BQ7LBC6 1761 aa14.97□□□□□ -0.01
FGD4-207ENST00000494275 ATP10DQ9P241 1426 aa14.96□□□□□ -0.01
FGD4-207ENST00000494275 CRKLP46109 303 aaKnown RBP14.96□□□□□ -0.01
FGD4-207ENST00000494275 INTS5Q6P9B9 1019 aaKnown RBP14.96□□□□□ -0.01
FGD4-207ENST00000494275 TRMT2AQ8IZ69 625 aaKnown RBP14.96□□□□□ -0.01
FGD4-207ENST00000494275 CCDC87Q9NVE4 849 aa14.96□□□□□ -0.01
FGD4-207ENST00000494275 KIF13BQ9NQT8 1826 aa14.96□□□□□ -0.01
FGD4-207ENST00000494275 ERBB4Q15303 1308 aa14.96□□□□□ -0.02
FGD4-207ENST00000494275 SSFA2P28290 1259 aa14.95□□□□□ -0.02
FGD4-207ENST00000494275 HNRNPUQ00839 825 aaKnown RBP eCLIP14.95□□□□□ -0.02
FGD4-207ENST00000494275 SLFN5Q08AF3 891 aa14.95□□□□□ -0.02
FGD4-207ENST00000494275 AK7Q96M32 723 aa14.95□□□□□ -0.02
FGD4-207ENST00000494275 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
FGD4-207ENST00000494275 ADCY9O60503 1353 aa14.94□□□□□ -0.02
FGD4-207ENST00000494275 RTCBQ9Y3I0 505 aaKnown RBP14.94□□□□□ -0.02
FGD4-207ENST00000494275 ZBED9Q6R2W3 1325 aa14.94□□□□□ -0.02
FGD4-207ENST00000494275 IL6STP40189 918 aaPredicted RBP14.93□□□□□ -0.02
FGD4-207ENST00000494275 DUSP27Q5VZP5 1158 aa14.93□□□□□ -0.02
FGD4-207ENST00000494275 FANCIQ9NVI1 1328 aa14.93□□□□□ -0.02
FGD4-207ENST00000494275 PRAMEF22A3QJZ6 481 aa14.92□□□□□ -0.02
FGD4-207ENST00000494275 TJP1Q07157 1748 aa14.92□□□□□ -0.02
FGD4-207ENST00000494275 GNPATO15228 680 aa14.92□□□□□ -0.02
FGD4-207ENST00000494275 EIF5P55010 431 aaKnown RBP14.92□□□□□ -0.02
FGD4-207ENST00000494275 TRAPPC3LQ5T215 181 aa14.92□□□□□ -0.02
FGD4-207ENST00000494275 C8orf58Q8NAV2 365 aa14.92□□□□□ -0.02
FGD4-207ENST00000494275 TSR2Q969E8 191 aaKnown RBP14.92□□□□□ -0.02
FGD4-207ENST00000494275 GPBP1L1Q9HC44 474 aaPredicted RBP14.92□□□□□ -0.02
FGD4-207ENST00000494275 COL5A3P25940 1745 aaPredicted RBP14.91□□□□□ -0.02
FGD4-207ENST00000494275 A0A087WZG4 1122 aa14.91□□□□□ -0.02
FGD4-207ENST00000494275 RGL2O15211 777 aa14.91□□□□□ -0.02
FGD4-207ENST00000494275 ZBTB1Q9Y2K1 713 aa14.91□□□□□ -0.02
FGD4-207ENST00000494275 BRCA1P38398 1863 aaKnown RBP14.9□□□□□ -0.02
FGD4-207ENST00000494275 KIAA1551Q9HCM1 1747 aa14.9□□□□□ -0.02
FGD4-207ENST00000494275 N4BP2Q86UW6 1770 aaPredicted RBP14.9□□□□□ -0.02
FGD4-207ENST00000494275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.9□□□□□ -0.02
FGD4-207ENST00000494275 NBPF26B4DH59 902 aa14.9□□□□□ -0.02
FGD4-207ENST00000494275 A1BGP04217 495 aa14.9□□□□□ -0.02
FGD4-207ENST00000494275 KRT24Q2M2I5 525 aa14.9□□□□□ -0.02
FGD4-207ENST00000494275 IFFO2Q5TF58 517 aa14.9□□□□□ -0.02
FGD4-207ENST00000494275 NBPF10Q6P3W6 841 aaKnown RBP14.9□□□□□ -0.02
FGD4-207ENST00000494275 NBPF15Q8N660 670 aa14.9□□□□□ -0.02
FGD4-207ENST00000494275 VAMP4O75379 141 aa14.89□□□□□ -0.03
FGD4-207ENST00000494275 CT47B1P0C2W7 299 aaPredicted RBP14.89□□□□□ -0.03
FGD4-207ENST00000494275 PDIA6Q15084 440 aa14.89□□□□□ -0.03
FGD4-207ENST00000494275 TWISTNBQ3B726 338 aaPredicted RBP14.89□□□□□ -0.03
FGD4-207ENST00000494275 ARHGEF1Q92888 912 aaKnown RBP14.89□□□□□ -0.03
FGD4-207ENST00000494275 ZNF428Q96B54 188 aa14.89□□□□□ -0.03
FGD4-207ENST00000494275 CDCA7LQ96GN5 454 aa14.89□□□□□ -0.03
FGD4-207ENST00000494275 MYH14Q7Z406 1995 aaKnown RBP14.89□□□□□ -0.03
FGD4-207ENST00000494275 CANXP27824 592 aaKnown RBP14.88□□□□□ -0.03
FGD4-207ENST00000494275 EXOSC9Q06265 439 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms