RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 ZNF316A6NFI3 1004 aaPredicted RBP9.55□□□□□ -0.88
RBM39-239ENST00000494274 GRIN3BO60391 1043 aa9.55□□□□□ -0.88
RBM39-239ENST00000494274 SNRPA1P09661 255 aaKnown RBP9.55□□□□□ -0.88
RBM39-239ENST00000494274 YBX3P16989 372 aaKnown RBP eCLIP9.55□□□□□ -0.88
RBM39-239ENST00000494274 PIP4K2AP48426 406 aaPredicted RBP9.55□□□□□ -0.88
RBM39-239ENST00000494274 BICDL1Q6ZP65 573 aa9.55□□□□□ -0.88
RBM39-239ENST00000494274 NARFQ9UHQ1 456 aa9.55□□□□□ -0.88
RBM39-239ENST00000494274 TBC1D2BQ9UPU7 963 aa9.55□□□□□ -0.88
RBM39-239ENST00000494274 RRP7AQ9Y3A4 280 aaKnown RBP9.55□□□□□ -0.88
RBM39-239ENST00000494274 SOS1Q07889 1333 aaPredicted RBP9.55□□□□□ -0.88
RBM39-239ENST00000494274 A0A087WZG4 1122 aa9.54□□□□□ -0.88
RBM39-239ENST00000494274 ADAMTS8Q9UP79 889 aa9.54□□□□□ -0.88
RBM39-239ENST00000494274 ITGB4P16144 1822 aa9.54□□□□□ -0.88
RBM39-239ENST00000494274 KCNA4P22459 653 aa9.53□□□□□ -0.88
RBM39-239ENST00000494274 TM4SF1P30408 202 aa9.53□□□□□ -0.88
RBM39-239ENST00000494274 TMPOP42166 694 aaKnown RBP9.53□□□□□ -0.88
RBM39-239ENST00000494274 EIF5P55010 431 aaKnown RBP9.53□□□□□ -0.88
RBM39-239ENST00000494274 TGFB2P61812 414 aa9.53□□□□□ -0.88
RBM39-239ENST00000494274 DDR1Q08345 913 aa9.53□□□□□ -0.88
RBM39-239ENST00000494274 NFIXQ14938 502 aa9.53□□□□□ -0.88
RBM39-239ENST00000494274 PNISRQ8TF01 805 aaKnown RBP9.53□□□□□ -0.88
RBM39-239ENST00000494274 COL15A1P39059 1388 aa9.52□□□□□ -0.88
RBM39-239ENST00000494274 C5P01031 1676 aa9.52□□□□□ -0.89
RBM39-239ENST00000494274 DPEP1P16444 411 aa9.52□□□□□ -0.89
RBM39-239ENST00000494274 IL6STP40189 918 aaPredicted RBP9.52□□□□□ -0.89
RBM39-239ENST00000494274 NGEFQ8N5V2 710 aa9.52□□□□□ -0.89
RBM39-239ENST00000494274 RUNDC1Q96C34 613 aa9.52□□□□□ -0.89
RBM39-239ENST00000494274 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.89
RBM39-239ENST00000494274 BCS1LQ9Y276 419 aa9.52□□□□□ -0.89
RBM39-239ENST00000494274 MRC1P22897 1456 aa9.52□□□□□ -0.89
RBM39-239ENST00000494274 POLRMTO00411 1230 aaKnown RBP9.51□□□□□ -0.89
RBM39-239ENST00000494274 SERPINB2P05120 415 aa9.51□□□□□ -0.89
RBM39-239ENST00000494274 EIF4A1P60842 406 aaKnown RBP9.51□□□□□ -0.89
RBM39-239ENST00000494274 DZIP3Q86Y13 1208 aaKnown RBP9.51□□□□□ -0.89
RBM39-239ENST00000494274 TSPYL4Q9UJ04 414 aa9.51□□□□□ -0.89
RBM39-239ENST00000494274 LAS1LQ9Y4W2 734 aaKnown RBP9.51□□□□□ -0.89
RBM39-239ENST00000494274 KCPQ6ZWJ8 1503 aa9.51□□□□□ -0.89
RBM39-239ENST00000494274 NPHP1O15259 732 aa9.5□□□□□ -0.89
RBM39-239ENST00000494274 CHRNA5P30532 468 aa9.5□□□□□ -0.89
RBM39-239ENST00000494274 LMOD3Q0VAK6 560 aa9.5□□□□□ -0.89
RBM39-239ENST00000494274 TBC1D9BQ66K14 1250 aa9.5□□□□□ -0.89
RBM39-239ENST00000494274 CCDC24Q8N4L8 307 aa9.5□□□□□ -0.89
RBM39-239ENST00000494274 NBPF26B4DH59 902 aa9.49□□□□□ -0.89
RBM39-239ENST00000494274 ANP32CO43423 234 aa9.49□□□□□ -0.89
RBM39-239ENST00000494274 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
RBM39-239ENST00000494274 CAMTA2O94983 1202 aa9.49□□□□□ -0.89
RBM39-239ENST00000494274 MYL6BP14649 208 aa9.49□□□□□ -0.89
RBM39-239ENST00000494274 EIF2S2P20042 333 aaKnown RBP9.49□□□□□ -0.89
RBM39-239ENST00000494274 NBPF10Q6P3W6 841 aaKnown RBP9.49□□□□□ -0.89
RBM39-239ENST00000494274 ARHGAP27Q6ZUM4 889 aa9.49□□□□□ -0.89
RBM39-239ENST00000494274 NBPF15Q8N660 670 aa9.49□□□□□ -0.89
RBM39-239ENST00000494274 ZNF784Q8NCA9 323 aaPredicted RBP9.49□□□□□ -0.89
RBM39-239ENST00000494274 SETDB2Q96T68 719 aa9.49□□□□□ -0.89
RBM39-239ENST00000494274 PIM2Q9P1W9 311 aa9.49□□□□□ -0.89
RBM39-239ENST00000494274 SENP3-EIF4A1A0A087X0R7 540 aa9.48□□□□□ -0.89
RBM39-239ENST00000494274 APAF1O14727 1248 aa9.48□□□□□ -0.89
RBM39-239ENST00000494274 KCNA3P22001 575 aa9.48□□□□□ -0.89
RBM39-239ENST00000494274 CCDC184Q52MB2 194 aa9.48□□□□□ -0.89
RBM39-239ENST00000494274 FAM177BA6PVY3 158 aa9.47□□□□□ -0.89
RBM39-239ENST00000494274 DALRD3Q5D0E6 543 aaKnown RBP9.47□□□□□ -0.89
RBM39-239ENST00000494274 NECTIN2Q92692 538 aa9.47□□□□□ -0.89
RBM39-239ENST00000494274 TRIM35Q9UPQ4 493 aa9.47□□□□□ -0.89
RBM39-239ENST00000494274 QSER1Q2KHR3 1735 aa9.47□□□□□ -0.89
RBM39-239ENST00000494274 TAF1LQ8IZX4 1826 aa9.47□□□□□ -0.89
RBM39-239ENST00000494274 TUBGCP6Q96RT7 1819 aa9.47□□□□□ -0.89
RBM39-239ENST00000494274 SCN11AQ9UI33 1791 aa9.46□□□□□ -0.9
RBM39-239ENST00000494274 H0YIN7 160 aa9.46□□□□□ -0.9
RBM39-239ENST00000494274 HLFQ16534 295 aa9.46□□□□□ -0.9
RBM39-239ENST00000494274 CLEC4GQ6UXB4 293 aa9.46□□□□□ -0.9
RBM39-239ENST00000494274 C2CD5Q86YS7 1000 aa9.46□□□□□ -0.9
RBM39-239ENST00000494274 NIP7Q9Y221 180 aaKnown RBP eCLIP9.46□□□□□ -0.9
RBM39-239ENST00000494274 ZNF652Q9Y2D9 606 aa9.46□□□□□ -0.9
RBM39-239ENST00000494274 UBR3Q6ZT12 1888 aa9.46□□□□□ -0.9
RBM39-239ENST00000494274 C10orf71Q711Q0 1435 aa9.46□□□□□ -0.9
RBM39-239ENST00000494274 CICQ96RK0 1608 aaPredicted RBP9.45□□□□□ -0.9
RBM39-239ENST00000494274 CHL1O00533 1208 aa9.45□□□□□ -0.9
RBM39-239ENST00000494274 GTF2E1P29083 439 aaPredicted RBP9.45□□□□□ -0.9
RBM39-239ENST00000494274 PRR5LQ6MZQ0 368 aa9.45□□□□□ -0.9
RBM39-239ENST00000494274 TTLL7Q6ZT98 887 aa9.45□□□□□ -0.9
RBM39-239ENST00000494274 NBPF5PQ86XG9 351 aaPredicted RBP9.45□□□□□ -0.9
RBM39-239ENST00000494274 CNBD1Q8NA66 436 aa9.45□□□□□ -0.9
RBM39-239ENST00000494274 ZNF622Q969S3 477 aaKnown RBP eCLIP9.45□□□□□ -0.96e-20■■□□□ 12
RBM39-239ENST00000494274 MRS2Q9HD23 443 aa9.45□□□□□ -0.9
RBM39-239ENST00000494274 BABAM1Q9NWV8 329 aa9.45□□□□□ -0.9
RBM39-239ENST00000494274 ZNF219Q9P2Y4 722 aaPredicted RBP9.45□□□□□ -0.9
RBM39-239ENST00000494274 PXDNLA1KZ92 1463 aa9.45□□□□□ -0.9
RBM39-239ENST00000494274 ADAMTS7Q9UKP4 1686 aa9.45□□□□□ -0.9
RBM39-239ENST00000494274 ANXA1P04083 346 aa9.44□□□□□ -0.9
RBM39-239ENST00000494274 PDE6BP35913 854 aa9.44□□□□□ -0.9
RBM39-239ENST00000494274 ST5P78524 1137 aa9.44□□□□□ -0.9
RBM39-239ENST00000494274 AIMP1Q12904 312 aaKnown RBP9.44□□□□□ -0.9
RBM39-239ENST00000494274 KRT24Q2M2I5 525 aa9.44□□□□□ -0.9
RBM39-239ENST00000494274 TPTE2Q6XPS3 522 aa9.44□□□□□ -0.9
RBM39-239ENST00000494274 KIF6Q6ZMV9 814 aa9.44□□□□□ -0.9
RBM39-239ENST00000494274 ZNF526Q8TF50 670 aaPredicted RBP9.44□□□□□ -0.9
RBM39-239ENST00000494274 BRIP1Q9BX63 1249 aa9.44□□□□□ -0.9
RBM39-239ENST00000494274 ZBTB3Q9H5J0 574 aa9.44□□□□□ -0.9
RBM39-239ENST00000494274 MYH14Q7Z406 1995 aaKnown RBP9.43□□□□□ -0.9
RBM39-239ENST00000494274 TJP1Q07157 1748 aa9.43□□□□□ -0.9
RBM39-239ENST00000494274 ZNF831Q5JPB2 1677 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms