RNA–Protein interactions for RNA: ENST00000494174.5

NECAB3-215, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 859 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-215ENST00000494174 UTRNP46939 3433 aa25.94■■□□□ 1.74
NECAB3-215ENST00000494174 TMPOP42166 694 aaKnown RBP25.93■■□□□ 1.74
NECAB3-215ENST00000494174 RUNDC1Q96C34 613 aa25.92■■□□□ 1.74
NECAB3-215ENST00000494174 ADAMTS8Q9UP79 889 aa25.92■■□□□ 1.74
NECAB3-215ENST00000494174 COL15A1P39059 1388 aa25.92■■□□□ 1.74
NECAB3-215ENST00000494174 KIF13BQ9NQT8 1826 aa25.91■■□□□ 1.74
NECAB3-215ENST00000494174 EIF5P55010 431 aaKnown RBP25.91■■□□□ 1.74
NECAB3-215ENST00000494174 GOLGB1Q14789 3259 aaKnown RBP25.9■■□□□ 1.74
NECAB3-215ENST00000494174 LMOD3Q0VAK6 560 aa25.9■■□□□ 1.74
NECAB3-215ENST00000494174 BABAM1Q9NWV8 329 aa25.9■■□□□ 1.74
NECAB3-215ENST00000494174 MMP10P09238 476 aa25.89■■□□□ 1.74
NECAB3-215ENST00000494174 SNRPA1P09661 255 aaKnown RBP25.89■■□□□ 1.74
NECAB3-215ENST00000494174 RIPK4P57078 832 aa25.89■■□□□ 1.74
NECAB3-215ENST00000494174 NARFQ9UHQ1 456 aa25.89■■□□□ 1.74
NECAB3-215ENST00000494174 DCAF8L1A6NGE4 600 aa25.88■■□□□ 1.73
NECAB3-215ENST00000494174 IL6STP40189 918 aaPredicted RBP25.88■■□□□ 1.73
NECAB3-215ENST00000494174 NLGN2Q8NFZ4 835 aa25.87■■□□□ 1.73
NECAB3-215ENST00000494174 SRP68Q9UHB9 627 aaKnown RBP25.87■■□□□ 1.73
NECAB3-215ENST00000494174 LAMB4A4D0S4 1761 aa25.86■■□□□ 1.73
NECAB3-215ENST00000494174 C10orf71Q711Q0 1435 aa25.86■■□□□ 1.73
NECAB3-215ENST00000494174 A0A087WZG4 1122 aa25.85■■□□□ 1.73
NECAB3-215ENST00000494174 FKBP8Q14318 412 aa25.85■■□□□ 1.73
NECAB3-215ENST00000494174 THUMPD2Q9BTF0 503 aaKnown RBP25.85■■□□□ 1.73
NECAB3-215ENST00000494174 USP16Q9Y5T5 823 aa25.85■■□□□ 1.73
NECAB3-215ENST00000494174 SCN7AQ01118 1682 aa25.84■■□□□ 1.73
NECAB3-215ENST00000494174 ZPR1O75312 459 aa25.84■■□□□ 1.73
NECAB3-215ENST00000494174 TM4SF1P30408 202 aa25.84■■□□□ 1.73
NECAB3-215ENST00000494174 CANXP27824 592 aaKnown RBP25.83■■□□□ 1.73
NECAB3-215ENST00000494174 EIF4A1P60842 406 aaKnown RBP25.83■■□□□ 1.73
NECAB3-215ENST00000494174 CCDC146Q8IYE0 955 aa25.83■■□□□ 1.73
NECAB3-215ENST00000494174 TRIM35Q9UPQ4 493 aa25.83■■□□□ 1.73
NECAB3-215ENST00000494174 KIAA1551Q9HCM1 1747 aa25.83■■□□□ 1.72
NECAB3-215ENST00000494174 USPL1Q5W0Q7 1092 aa25.82■■□□□ 1.72
NECAB3-215ENST00000494174 BCL2L12Q9HB09 334 aa25.82■■□□□ 1.72
NECAB3-215ENST00000494174 MIS18AQ9NYP9 233 aa25.82■■□□□ 1.72
NECAB3-215ENST00000494174 NRXN2Q9P2S2 1712 aa25.81■■□□□ 1.72
NECAB3-215ENST00000494174 PRAMEF22A3QJZ6 481 aa25.81■■□□□ 1.72
NECAB3-215ENST00000494174 A1BGP04217 495 aa25.81■■□□□ 1.72
NECAB3-215ENST00000494174 KLHL34Q8N239 644 aa25.81■■□□□ 1.72
NECAB3-215ENST00000494174 RGL2O15211 777 aa25.8■■□□□ 1.72
NECAB3-215ENST00000494174 ANP32CO43423 234 aa25.8■■□□□ 1.72
NECAB3-215ENST00000494174 GIGYF1O75420 1035 aaPredicted RBP25.8■■□□□ 1.72
NECAB3-215ENST00000494174 DDR1Q08345 913 aa25.8■■□□□ 1.72
NECAB3-215ENST00000494174 PARP3Q9Y6F1 533 aa25.8■■□□□ 1.72
NECAB3-215ENST00000494174 POLRMTO00411 1230 aaKnown RBP25.79■■□□□ 1.72
NECAB3-215ENST00000494174 CCDC184Q52MB2 194 aa25.79■■□□□ 1.72
NECAB3-215ENST00000494174 BCORQ6W2J9 1755 aa25.79■■□□□ 1.72
NECAB3-215ENST00000494174 PXDNLA1KZ92 1463 aa25.78■■□□□ 1.72
NECAB3-215ENST00000494174 TGFB2P61812 414 aa25.77■■□□□ 1.72
NECAB3-215ENST00000494174 RRP7AQ9Y3A4 280 aaKnown RBP25.77■■□□□ 1.72
NECAB3-215ENST00000494174 NBPF26B4DH59 902 aa25.76■■□□□ 1.71
NECAB3-215ENST00000494174 CHL1O00533 1208 aa25.76■■□□□ 1.71
NECAB3-215ENST00000494174 NBPF10Q6P3W6 841 aaKnown RBP25.76■■□□□ 1.71
NECAB3-215ENST00000494174 NBPF15Q8N660 670 aa25.76■■□□□ 1.71
NECAB3-215ENST00000494174 TSPYL4Q9UJ04 414 aa25.76■■□□□ 1.71
NECAB3-215ENST00000494174 CAMTA2O94983 1202 aa25.75■■□□□ 1.71
NECAB3-215ENST00000494174 NFIXQ14938 502 aa25.75■■□□□ 1.71
NECAB3-215ENST00000494174 ERBB4Q15303 1308 aa25.74■■□□□ 1.71
NECAB3-215ENST00000494174 NCBP3Q53F19 620 aaKnown RBP25.74■■□□□ 1.71
NECAB3-215ENST00000494174 CHD4Q14839 1912 aa25.74■■□□□ 1.71
NECAB3-215ENST00000494174 AFDNP55196 1824 aaKnown RBP25.74■■□□□ 1.71
NECAB3-215ENST00000494174 GPR162Q16538 588 aa25.73■■□□□ 1.71
NECAB3-215ENST00000494174 APAF1O14727 1248 aa25.72■■□□□ 1.71
NECAB3-215ENST00000494174 YBX3P16989 372 aaKnown RBP eCLIP25.72■■□□□ 1.71
NECAB3-215ENST00000494174 NEUROD2Q15784 382 aa25.72■■□□□ 1.71
NECAB3-215ENST00000494174 CLEC4GQ6UXB4 293 aa25.72■■□□□ 1.71
NECAB3-215ENST00000494174 BRCA1P38398 1863 aaKnown RBP25.72■■□□□ 1.71
NECAB3-215ENST00000494174 GRIN3BO60391 1043 aa25.71■■□□□ 1.71
NECAB3-215ENST00000494174 DZIP3Q86Y13 1208 aaKnown RBP25.71■■□□□ 1.71
NECAB3-215ENST00000494174 TBC1D2BQ9UPU7 963 aa25.71■■□□□ 1.71
NECAB3-215ENST00000494174 NPM2Q86SE8 214 aaKnown RBP25.7■■□□□ 1.7
NECAB3-215ENST00000494174 ZNF853P0CG23 659 aa25.69■■□□□ 1.7
NECAB3-215ENST00000494174 CFAP44Q96MT7 982 aa25.69■■□□□ 1.7
NECAB3-215ENST00000494174 MRS2Q9HD23 443 aa25.69■■□□□ 1.7
NECAB3-215ENST00000494174 N4BP2Q86UW6 1770 aaPredicted RBP25.68■■□□□ 1.7
NECAB3-215ENST00000494174 SERPINB2P05120 415 aa25.67■■□□□ 1.7
NECAB3-215ENST00000494174 PIP4K2AP48426 406 aaPredicted RBP25.67■■□□□ 1.7
NECAB3-215ENST00000494174 CCDC27Q2M243 656 aa25.67■■□□□ 1.7
NECAB3-215ENST00000494174 TBC1D9BQ66K14 1250 aa25.67■■□□□ 1.7
NECAB3-215ENST00000494174 CARMIL3Q8ND23 1372 aa25.67■■□□□ 1.7
NECAB3-215ENST00000494174 HOXB7P09629 217 aa25.66■■□□□ 1.7
NECAB3-215ENST00000494174 KCNA3P22001 575 aa25.66■■□□□ 1.7
NECAB3-215ENST00000494174 CALD1Q05682 793 aaKnown RBP25.66■■□□□ 1.7
NECAB3-215ENST00000494174 LRP10Q7Z4F1 713 aa25.66■■□□□ 1.7
NECAB3-215ENST00000494174 ZNF330Q9Y3S2 320 aaPredicted RBP25.66■■□□□ 1.7
NECAB3-215ENST00000494174 YY1P25490 414 aa25.65■■□□□ 1.7
NECAB3-215ENST00000494174 IFT57Q9NWB7 429 aa25.65■■□□□ 1.7
NECAB3-215ENST00000494174 ZNF652Q9Y2D9 606 aa25.64■■□□□ 1.7
NECAB3-215ENST00000494174 ERVV-1B6SEH8 477 aa25.63■■□□□ 1.69
NECAB3-215ENST00000494174 DPEP1P16444 411 aa25.63■■□□□ 1.69
NECAB3-215ENST00000494174 PDIA6Q15084 440 aa25.63■■□□□ 1.69
NECAB3-215ENST00000494174 DLEC1Q9Y238 1755 aa25.62■■□□□ 1.69
NECAB3-215ENST00000494174 A0A0G2JLW4 131 aa25.62■■□□□ 1.69
NECAB3-215ENST00000494174 ARFGEF1Q9Y6D6 1849 aa25.61■■□□□ 1.69
NECAB3-215ENST00000494174 PELP1Q8IZL8 1130 aaKnown RBP25.61■■□□□ 1.69
NECAB3-215ENST00000494174 SETDB2Q96T68 719 aa25.61■■□□□ 1.69
NECAB3-215ENST00000494174 GNAI1P63096 354 aa25.6■■□□□ 1.69
NECAB3-215ENST00000494174 MBIPQ9NS73 344 aa25.6■■□□□ 1.69
NECAB3-215ENST00000494174 ATP10DQ9P241 1426 aa25.6■■□□□ 1.69
NECAB3-215ENST00000494174 MAP3K15Q6ZN16 1313 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms