RNA–Protein interactions for RNA: ENST00000494042.3

RN7SL416P-201, Transcript of RNA, 7SL, cytoplasmic 416, pseudogene, humanhuman

BASIC

Gene RN7SL416P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL416P-201ENST00000494042 CABP4P57796 275 aa10.46□□□□□ -0.73
RN7SL416P-201ENST00000494042 ZNF790Q6PG37 636 aa10.46□□□□□ -0.73
RN7SL416P-201ENST00000494042 TSPYL6Q8N831 410 aa10.46□□□□□ -0.73
RN7SL416P-201ENST00000494042 C8orf58Q8NAV2 365 aa10.46□□□□□ -0.73
RN7SL416P-201ENST00000494042 ZNF526Q8TF50 670 aaPredicted RBP10.46□□□□□ -0.73
RN7SL416P-201ENST00000494042 BTBD11A6QL63 1104 aa10.45□□□□□ -0.74
RN7SL416P-201ENST00000494042 GNAI1P63096 354 aa10.45□□□□□ -0.74
RN7SL416P-201ENST00000494042 CALD1Q05682 793 aaKnown RBP10.45□□□□□ -0.74
RN7SL416P-201ENST00000494042 ZNF496Q96IT1 587 aaPredicted RBP10.45□□□□□ -0.74
RN7SL416P-201ENST00000494042 WDR90Q96KV7 1748 aa10.44□□□□□ -0.74
RN7SL416P-201ENST00000494042 TEFQ10587 303 aa10.44□□□□□ -0.74
RN7SL416P-201ENST00000494042 SLC27A3Q5K4L6 730 aa10.44□□□□□ -0.74
RN7SL416P-201ENST00000494042 SLC16A10Q8TF71 515 aa10.44□□□□□ -0.74
RN7SL416P-201ENST00000494042 CCNL1Q9UK58 526 aaPredicted RBP10.44□□□□□ -0.74
RN7SL416P-201ENST00000494042 BRCA1P38398 1863 aaKnown RBP10.43□□□□□ -0.74
RN7SL416P-201ENST00000494042 KIF13BQ9NQT8 1826 aa10.43□□□□□ -0.74
RN7SL416P-201ENST00000494042 PRAMEF22A3QJZ6 481 aa10.43□□□□□ -0.74
RN7SL416P-201ENST00000494042 VAMP4O75379 141 aa10.43□□□□□ -0.74
RN7SL416P-201ENST00000494042 EXOSC9Q06265 439 aaKnown RBP10.43□□□□□ -0.74
RN7SL416P-201ENST00000494042 TMOD3Q9NYL9 352 aa10.43□□□□□ -0.74
RN7SL416P-201ENST00000494042 TSPYL4Q9UJ04 414 aa10.43□□□□□ -0.74
RN7SL416P-201ENST00000494042 C4AP0C0L4 1744 aa10.43□□□□□ -0.74
RN7SL416P-201ENST00000494042 LRP10Q7Z4F1 713 aa10.42□□□□□ -0.74
RN7SL416P-201ENST00000494042 COL23A1Q86Y22 540 aaPredicted RBP10.42□□□□□ -0.74
RN7SL416P-201ENST00000494042 MYH16Q9H6N6 1097 aa10.42□□□□□ -0.74
RN7SL416P-201ENST00000494042 GOLGB1Q14789 3259 aaKnown RBP10.42□□□□□ -0.74
RN7SL416P-201ENST00000494042 KCPQ6ZWJ8 1503 aa10.42□□□□□ -0.74
RN7SL416P-201ENST00000494042 ADCY9O60503 1353 aa10.41□□□□□ -0.74
RN7SL416P-201ENST00000494042 CICQ96RK0 1608 aaPredicted RBP10.41□□□□□ -0.74
RN7SL416P-201ENST00000494042 ITPK1Q13572 414 aa10.41□□□□□ -0.74
RN7SL416P-201ENST00000494042 PDIA6Q15084 440 aa10.41□□□□□ -0.74
RN7SL416P-201ENST00000494042 LAS1LQ9Y4W2 734 aaKnown RBP10.41□□□□□ -0.74
RN7SL416P-201ENST00000494042 COL5A3P25940 1745 aaPredicted RBP10.41□□□□□ -0.74
RN7SL416P-201ENST00000494042 VSIG10Q8N0Z9 540 aa10.4□□□□□ -0.74
RN7SL416P-201ENST00000494042 GPBP1L1Q9HC44 474 aaPredicted RBP10.4□□□□□ -0.74
RN7SL416P-201ENST00000494042 USP16Q9Y5T5 823 aa10.4□□□□□ -0.74
RN7SL416P-201ENST00000494042 VIRMAQ69YN4 1812 aaKnown RBP10.4□□□□□ -0.75
RN7SL416P-201ENST00000494042 PALLDQ8WX93 1383 aa10.39□□□□□ -0.75
RN7SL416P-201ENST00000494042 DLG5Q8TDM6 1919 aa10.39□□□□□ -0.75
RN7SL416P-201ENST00000494042 LOC102724428A0A0B4J2F2 783 aa10.39□□□□□ -0.75
RN7SL416P-201ENST00000494042 GRIN3BO60391 1043 aa10.39□□□□□ -0.75
RN7SL416P-201ENST00000494042 PTCD1O75127 700 aaKnown RBP10.39□□□□□ -0.75
RN7SL416P-201ENST00000494042 PHF14O94880 888 aa10.39□□□□□ -0.75
RN7SL416P-201ENST00000494042 HOXB7P09629 217 aa10.39□□□□□ -0.75
RN7SL416P-201ENST00000494042 SIK1P57059 783 aa10.39□□□□□ -0.75
RN7SL416P-201ENST00000494042 SMIM5Q71RC9 77 aa10.39□□□□□ -0.75
RN7SL416P-201ENST00000494042 SCN11AQ9UI33 1791 aa10.39□□□□□ -0.75
RN7SL416P-201ENST00000494042 ARFGEF1Q9Y6D6 1849 aa10.38□□□□□ -0.75
RN7SL416P-201ENST00000494042 NBPF26B4DH59 902 aa10.38□□□□□ -0.75
RN7SL416P-201ENST00000494042 ELL2O00472 640 aaPredicted RBP10.38□□□□□ -0.75
RN7SL416P-201ENST00000494042 SNRPA1P09661 255 aaKnown RBP10.38□□□□□ -0.75
RN7SL416P-201ENST00000494042 CT47B1P0C2W7 299 aaPredicted RBP10.38□□□□□ -0.75
RN7SL416P-201ENST00000494042 CYP19A1P11511 503 aaPredicted RBP10.38□□□□□ -0.75
RN7SL416P-201ENST00000494042 RARSP54136 660 aaKnown RBP10.38□□□□□ -0.75
RN7SL416P-201ENST00000494042 NBPF10Q6P3W6 841 aaKnown RBP10.38□□□□□ -0.75
RN7SL416P-201ENST00000494042 INTS5Q6P9B9 1019 aaKnown RBP10.38□□□□□ -0.75
RN7SL416P-201ENST00000494042 NBPF15Q8N660 670 aa10.38□□□□□ -0.75
RN7SL416P-201ENST00000494042 SMARCC1Q92922 1105 aaPredicted RBP10.38□□□□□ -0.75
RN7SL416P-201ENST00000494042 FMNL2Q96PY5 1086 aa10.38□□□□□ -0.75
RN7SL416P-201ENST00000494042 SIPA1L3O60292 1781 aaPredicted RBP10.38□□□□□ -0.75
RN7SL416P-201ENST00000494042 SOS1Q07889 1333 aaPredicted RBP10.37□□□□□ -0.75
RN7SL416P-201ENST00000494042 RNF123Q5XPI4 1314 aa10.37□□□□□ -0.75
RN7SL416P-201ENST00000494042 BRPF1P55201 1214 aaPredicted RBP10.37□□□□□ -0.75
RN7SL416P-201ENST00000494042 TWISTNBQ3B726 338 aaPredicted RBP10.37□□□□□ -0.75
RN7SL416P-201ENST00000494042 DNAJC10Q8IXB1 793 aa10.37□□□□□ -0.75
RN7SL416P-201ENST00000494042 SSH1Q8WYL5 1049 aa10.37□□□□□ -0.75
RN7SL416P-201ENST00000494042 HSPA6P17066 643 aa10.36□□□□□ -0.75
RN7SL416P-201ENST00000494042 PROSER3Q2NL68 480 aa10.36□□□□□ -0.75
RN7SL416P-201ENST00000494042 AMIGO3Q86WK7 504 aa10.36□□□□□ -0.75
RN7SL416P-201ENST00000494042 LINC00116Q8NCU8 138 aa10.36□□□□□ -0.75
RN7SL416P-201ENST00000494042 TNRC6CQ9HCJ0 1690 aaKnown RBP10.35□□□□□ -0.75
RN7SL416P-201ENST00000494042 A1BGP04217 495 aa10.35□□□□□ -0.75
RN7SL416P-201ENST00000494042 TTC5Q8N0Z6 440 aa10.35□□□□□ -0.75
RN7SL416P-201ENST00000494042 MRPL50Q8N5N7 158 aaKnown RBP10.35□□□□□ -0.75
RN7SL416P-201ENST00000494042 ZNF428Q96B54 188 aa10.35□□□□□ -0.75
RN7SL416P-201ENST00000494042 AK7Q96M32 723 aa10.35□□□□□ -0.75
RN7SL416P-201ENST00000494042 TIAM2Q8IVF5 1701 aa10.35□□□□□ -0.75
RN7SL416P-201ENST00000494042 CCDC88AQ3V6T2 1871 aa10.34□□□□□ -0.75
RN7SL416P-201ENST00000494042 BCAR3O75815 825 aa10.34□□□□□ -0.75
RN7SL416P-201ENST00000494042 G2E3Q7L622 706 aa10.34□□□□□ -0.75
RN7SL416P-201ENST00000494042 RBM42Q9BTD8 480 aaKnown RBP10.34□□□□□ -0.75
RN7SL416P-201ENST00000494042 KDM3BQ7LBC6 1761 aa10.34□□□□□ -0.75
RN7SL416P-201ENST00000494042 TCERG1O14776 1098 aaKnown RBP10.33□□□□□ -0.76
RN7SL416P-201ENST00000494042 ATP6V1AP38606 617 aa10.33□□□□□ -0.76
RN7SL416P-201ENST00000494042 ALDH1L2Q3SY69 923 aa10.33□□□□□ -0.76
RN7SL416P-201ENST00000494042 RC3H1Q5TC82 1133 aaKnown RBP10.33□□□□□ -0.76
RN7SL416P-201ENST00000494042 TEX13AQ9BXU3 409 aaPredicted RBP10.33□□□□□ -0.76
RN7SL416P-201ENST00000494042 RCAN3Q9UKA8 241 aa10.33□□□□□ -0.76
RN7SL416P-201ENST00000494042 CD2APQ9Y5K6 639 aa10.33□□□□□ -0.76
RN7SL416P-201ENST00000494042 PXDNLA1KZ92 1463 aa10.33□□□□□ -0.76
RN7SL416P-201ENST00000494042 SBF1O95248 1867 aa10.33□□□□□ -0.76
RN7SL416P-201ENST00000494042 CACNA1SQ13698 1873 aa10.33□□□□□ -0.76
RN7SL416P-201ENST00000494042 ANXA1P04083 346 aa10.32□□□□□ -0.76
RN7SL416P-201ENST00000494042 CRKLP46109 303 aaKnown RBP10.32□□□□□ -0.76
RN7SL416P-201ENST00000494042 PIP4K2AP48426 406 aaPredicted RBP10.32□□□□□ -0.76
RN7SL416P-201ENST00000494042 EIF5P55010 431 aaKnown RBP10.32□□□□□ -0.76
RN7SL416P-201ENST00000494042 HDGFL1Q5TGJ6 251 aa10.32□□□□□ -0.76
RN7SL416P-201ENST00000494042 DDX21Q9NR30 783 aaKnown RBP eCLIP10.32□□□□□ -0.76
RN7SL416P-201ENST00000494042 CHPF2Q9P2E5 772 aa10.32□□□□□ -0.76
RN7SL416P-201ENST00000494042 ZBTB1Q9Y2K1 713 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms