RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 SMG6Q86US8 1419 aaKnown RBP14.11□□□□□ -0.15
PDLIM1-205ENST00000493949 COG3Q96JB2 828 aa14.11□□□□□ -0.15
PDLIM1-205ENST00000493949 PUS7Q96PZ0 661 aaKnown RBP14.11□□□□□ -0.15
PDLIM1-205ENST00000493949 CREBZFQ9NS37 354 aa14.11□□□□□ -0.15
PDLIM1-205ENST00000493949 DICER1Q9UPY3 1922 aaKnown RBP14.11□□□□□ -0.15
PDLIM1-205ENST00000493949 ATP6V1AP38606 617 aa14.1□□□□□ -0.15
PDLIM1-205ENST00000493949 FAM161AQ3B820 660 aa14.1□□□□□ -0.15
PDLIM1-205ENST00000493949 RTCBQ9Y3I0 505 aaKnown RBP14.1□□□□□ -0.15
PDLIM1-205ENST00000493949 PARP3Q9Y6F1 533 aa14.1□□□□□ -0.15
PDLIM1-205ENST00000493949 DLEC1Q9Y238 1755 aa14.09□□□□□ -0.15
PDLIM1-205ENST00000493949 TNRC18O15417 2968 aaPredicted RBP14.09□□□□□ -0.15
PDLIM1-205ENST00000493949 ARHGEF1Q92888 912 aaKnown RBP14.09□□□□□ -0.15
PDLIM1-205ENST00000493949 ASAP1Q9ULH1 1129 aa14.09□□□□□ -0.15
PDLIM1-205ENST00000493949 KDRP35968 1356 aa14.09□□□□□ -0.15
PDLIM1-205ENST00000493949 NCAPD2Q15021 1401 aa14.08□□□□□ -0.15
PDLIM1-205ENST00000493949 POTECB2RU33 542 aa14.08□□□□□ -0.16
PDLIM1-205ENST00000493949 CTCFP49711 727 aaPredicted RBP14.08□□□□□ -0.16
PDLIM1-205ENST00000493949 RC3H1Q5TC82 1133 aaKnown RBP14.08□□□□□ -0.16
PDLIM1-205ENST00000493949 PRKRIP1Q9H875 184 aaPredicted RBP14.08□□□□□ -0.16
PDLIM1-205ENST00000493949 INSRP06213 1382 aa14.08□□□□□ -0.16
PDLIM1-205ENST00000493949 RGS19P49795 217 aa14.07□□□□□ -0.16
PDLIM1-205ENST00000493949 CNTNAP1P78357 1384 aa14.07□□□□□ -0.16
PDLIM1-205ENST00000493949 LMNB1P20700 586 aa14.06□□□□□ -0.16
PDLIM1-205ENST00000493949 ABHD8Q96I13 439 aa14.06□□□□□ -0.16
PDLIM1-205ENST00000493949 TMOD3Q9NYL9 352 aa14.06□□□□□ -0.16
PDLIM1-205ENST00000493949 MKRN1Q9UHC7 482 aaKnown RBP14.06□□□□□ -0.16
PDLIM1-205ENST00000493949 CNTNAP4Q9C0A0 1308 aa14.06□□□□□ -0.16
PDLIM1-205ENST00000493949 KIF24Q5T7B8 1368 aa14.06□□□□□ -0.16
PDLIM1-205ENST00000493949 RPS6KA4O75676 772 aa14.05□□□□□ -0.16
PDLIM1-205ENST00000493949 RRS1Q15050 365 aaKnown RBP14.05□□□□□ -0.16
PDLIM1-205ENST00000493949 ATG3Q9NT62 314 aa14.05□□□□□ -0.16
PDLIM1-205ENST00000493949 AFDNP55196 1824 aaKnown RBP14.04□□□□□ -0.16
PDLIM1-205ENST00000493949 RFC4P35249 363 aa14.04□□□□□ -0.16
PDLIM1-205ENST00000493949 RASSF7Q02833 373 aa14.04□□□□□ -0.16
PDLIM1-205ENST00000493949 MLLT1Q03111 559 aaPredicted RBP14.04□□□□□ -0.16
PDLIM1-205ENST00000493949 SLC4A9Q96Q91 983 aa14.04□□□□□ -0.16
PDLIM1-205ENST00000493949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.04□□□□□ -0.16
PDLIM1-205ENST00000493949 RNF123Q5XPI4 1314 aa14.04□□□□□ -0.16
PDLIM1-205ENST00000493949 PDE4DIPQ5VU43 2346 aa14.04□□□□□ -0.16
PDLIM1-205ENST00000493949 CHRNA5P30532 468 aa14.03□□□□□ -0.16
PDLIM1-205ENST00000493949 HSP90AB2PQ58FF8 381 aa14.03□□□□□ -0.16
PDLIM1-205ENST00000493949 AIDAQ96BJ3 306 aa14.03□□□□□ -0.16
PDLIM1-205ENST00000493949 WBP1LQ9NX94 342 aa14.03□□□□□ -0.16
PDLIM1-205ENST00000493949 SPG7Q9UQ90 795 aa14.03□□□□□ -0.16
PDLIM1-205ENST00000493949 FLT4P35916 1363 aa14.03□□□□□ -0.16
PDLIM1-205ENST00000493949 ADAMTS7Q9UKP4 1686 aa14.03□□□□□ -0.16
PDLIM1-205ENST00000493949 NRXN2Q9P2S2 1712 aa14.03□□□□□ -0.16
PDLIM1-205ENST00000493949 DDR1Q08345 913 aa14.02□□□□□ -0.17
PDLIM1-205ENST00000493949 CHADLQ6NUI6 762 aa14.02□□□□□ -0.17
PDLIM1-205ENST00000493949 FER1L6Q2WGJ9 1857 aa14.01□□□□□ -0.17
PDLIM1-205ENST00000493949 LBX1P52954 281 aa14.01□□□□□ -0.17
PDLIM1-205ENST00000493949 PASKQ96RG2 1323 aa14□□□□□ -0.17
PDLIM1-205ENST00000493949 CARD11Q9BXL7 1154 aa14□□□□□ -0.17
PDLIM1-205ENST00000493949 ANKRD26Q9UPS8 1709 aa14□□□□□ -0.17
PDLIM1-205ENST00000493949 SCN4AP35499 1836 aa13.99□□□□□ -0.17
PDLIM1-205ENST00000493949 KIF20BQ96Q89 1820 aa13.99□□□□□ -0.17
PDLIM1-205ENST00000493949 USP42Q9H9J4 1324 aaKnown RBP13.99□□□□□ -0.17
PDLIM1-205ENST00000493949 DPY19L2Q6NUT2 758 aa13.99□□□□□ -0.17
PDLIM1-205ENST00000493949 POLRMTO00411 1230 aaKnown RBP13.98□□□□□ -0.17
PDLIM1-205ENST00000493949 FYB1O15117 783 aa13.98□□□□□ -0.17
PDLIM1-205ENST00000493949 HSPA8P11142 646 aaKnown RBP13.98□□□□□ -0.17
PDLIM1-205ENST00000493949 PHKG2P15735 406 aa13.98□□□□□ -0.17
PDLIM1-205ENST00000493949 TM4SF1P30408 202 aa13.98□□□□□ -0.17
PDLIM1-205ENST00000493949 VEGFBP49765 207 aa13.98□□□□□ -0.17
PDLIM1-205ENST00000493949 IFNL2Q8IZJ0 200 aa13.98□□□□□ -0.17
PDLIM1-205ENST00000493949 MRS2Q9HD23 443 aa13.98□□□□□ -0.17
PDLIM1-205ENST00000493949 NFKBIEO00221 500 aa13.97□□□□□ -0.17
PDLIM1-205ENST00000493949 GGNBP2Q9H3C7 697 aa13.97□□□□□ -0.17
PDLIM1-205ENST00000493949 KIF7Q2M1P5 1343 aa13.96□□□□□ -0.17
PDLIM1-205ENST00000493949 TJP1Q07157 1748 aa13.96□□□□□ -0.17
PDLIM1-205ENST00000493949 EVX2Q03828 476 aa13.96□□□□□ -0.17
PDLIM1-205ENST00000493949 SRP68Q9UHB9 627 aaKnown RBP13.96□□□□□ -0.17
PDLIM1-205ENST00000493949 THSD7BQ9C0I4 1608 aa13.95□□□□□ -0.18
PDLIM1-205ENST00000493949 SPDYE2BA6NHP3 402 aa13.95□□□□□ -0.18
PDLIM1-205ENST00000493949 ERVV-2B6SEH9 535 aa13.95□□□□□ -0.18
PDLIM1-205ENST00000493949 POTEIP0CG38 1075 aa13.95□□□□□ -0.18
PDLIM1-205ENST00000493949 POTEJP0CG39 1038 aa13.95□□□□□ -0.18
PDLIM1-205ENST00000493949 SPDYE6P0CI01 402 aa13.95□□□□□ -0.18
PDLIM1-205ENST00000493949 SPDYE2Q495Y8 402 aa13.95□□□□□ -0.18
PDLIM1-205ENST00000493949 NUDCQ9Y266 331 aa13.95□□□□□ -0.18
PDLIM1-205ENST00000493949 TMEM88BA6NKF7 163 aa13.94□□□□□ -0.18
PDLIM1-205ENST00000493949 TTLL6Q8N841 843 aa13.94□□□□□ -0.18
PDLIM1-205ENST00000493949 TESK2Q96S53 571 aa13.94□□□□□ -0.18
PDLIM1-205ENST00000493949 ADAMTSL1Q8N6G6 1762 aa13.94□□□□□ -0.18
PDLIM1-205ENST00000493949 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
PDLIM1-205ENST00000493949 RASSF10A6NK89 507 aa13.92□□□□□ -0.18
PDLIM1-205ENST00000493949 CCDC85CA6NKD9 419 aa13.92□□□□□ -0.18
PDLIM1-205ENST00000493949 ITGBL1O95965 494 aaPredicted RBP13.92□□□□□ -0.18
PDLIM1-205ENST00000493949 CRKLP46109 303 aaKnown RBP13.92□□□□□ -0.18
PDLIM1-205ENST00000493949 MAP2K1Q02750 393 aaPredicted RBP13.92□□□□□ -0.18
PDLIM1-205ENST00000493949 LDHDQ86WU2 507 aa13.92□□□□□ -0.18
PDLIM1-205ENST00000493949 ANKRD31Q8N7Z5 1873 aa13.92□□□□□ -0.18
PDLIM1-205ENST00000493949 LTBP3Q9NS15 1303 aa13.91□□□□□ -0.18
PDLIM1-205ENST00000493949 NOP58Q9Y2X3 529 aaKnown RBP13.91□□□□□ -0.18
PDLIM1-205ENST00000493949 ST20-MTHFSA0A0A6YYL1 179 aa13.9□□□□□ -0.18
PDLIM1-205ENST00000493949 ERFEQ4G0M1 354 aa13.9□□□□□ -0.18
PDLIM1-205ENST00000493949 L3MBTL3Q96JM7 780 aaPredicted RBP13.9□□□□□ -0.18
PDLIM1-205ENST00000493949 EYA1Q99502 592 aa13.9□□□□□ -0.18
PDLIM1-205ENST00000493949 ARFGEF2Q9Y6D5 1785 aa13.89□□□□□ -0.19
PDLIM1-205ENST00000493949 IQCA1LA6NCM1 817 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms