RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 TRIM5Q9C035 493 aa9.98□□□□□ -0.81
GBP3-208ENST00000493594 SLFN14P0C7P3 912 aa9.97□□□□□ -0.81
GBP3-208ENST00000493594 HAP1P54257 671 aaPredicted RBP9.97□□□□□ -0.81
GBP3-208ENST00000493594 TPD52L1Q16890 204 aaPredicted RBP9.97□□□□□ -0.81
GBP3-208ENST00000493594 FERMT3Q86UX7 667 aa9.97□□□□□ -0.81
GBP3-208ENST00000493594 CCDC112Q8NEF3 446 aa9.97□□□□□ -0.81
GBP3-208ENST00000493594 SPG7Q9UQ90 795 aa9.97□□□□□ -0.81
GBP3-208ENST00000493594 CASTP20810 708 aaKnown RBP9.97□□□□□ -0.81
GBP3-208ENST00000493594 MAPK8IP2Q13387 824 aaPredicted RBP9.97□□□□□ -0.81
GBP3-208ENST00000493594 FAM200AQ8TCP9 573 aa9.97□□□□□ -0.81
GBP3-208ENST00000493594 DDX41Q9UJV9 622 aaKnown RBP9.97□□□□□ -0.81
GBP3-208ENST00000493594 DLG5Q8TDM6 1919 aa9.96□□□□□ -0.81
GBP3-208ENST00000493594 SMTNL1A8MU46 457 aa9.96□□□□□ -0.81
GBP3-208ENST00000493594 LIG1P18858 919 aa9.96□□□□□ -0.81
GBP3-208ENST00000493594 CCT4P50991 539 aaKnown RBP9.96□□□□□ -0.81
GBP3-208ENST00000493594 CWC27Q6UX04 472 aaKnown RBP9.96□□□□□ -0.81
GBP3-208ENST00000493594 TTC14Q96N46 770 aa9.96□□□□□ -0.81
GBP3-208ENST00000493594 MTMR6Q9Y217 621 aa9.96□□□□□ -0.81
GBP3-208ENST00000493594 MRVI1Q9Y6F6 885 aa9.96□□□□□ -0.81
GBP3-208ENST00000493594 ANKRD26Q9UPS8 1709 aa9.96□□□□□ -0.81
GBP3-208ENST00000493594 CDC42BPGQ6DT37 1551 aa9.96□□□□□ -0.81
GBP3-208ENST00000493594 KIAA0232Q92628 1395 aa9.96□□□□□ -0.82
GBP3-208ENST00000493594 NCKAP5LQ9HCH0 1330 aa9.96□□□□□ -0.82
GBP3-208ENST00000493594 NPHP1O15259 732 aa9.96□□□□□ -0.82
GBP3-208ENST00000493594 KCNJ4P48050 445 aa9.96□□□□□ -0.82
GBP3-208ENST00000493594 TYRO3Q06418 890 aa9.96□□□□□ -0.82
GBP3-208ENST00000493594 ANO6Q4KMQ2 910 aa9.96□□□□□ -0.82
GBP3-208ENST00000493594 ZSCAN25Q6NSZ9 544 aa9.96□□□□□ -0.82
GBP3-208ENST00000493594 CHD1O14646 1710 aa9.95□□□□□ -0.82
GBP3-208ENST00000493594 ERICH4A6NGS2 130 aa9.95□□□□□ -0.82
GBP3-208ENST00000493594 MAP3K11Q16584 847 aa9.95□□□□□ -0.82
GBP3-208ENST00000493594 TAF3Q5VWG9 929 aa9.95□□□□□ -0.82
GBP3-208ENST00000493594 NECAB1Q8N987 351 aa9.95□□□□□ -0.82
GBP3-208ENST00000493594 NUP62CLQ9H1M0 184 aa9.95□□□□□ -0.82
GBP3-208ENST00000493594 CBX8Q9HC52 389 aa9.95□□□□□ -0.82
GBP3-208ENST00000493594 LRRFIP2Q9Y608 721 aaKnown RBP9.95□□□□□ -0.82
GBP3-208ENST00000493594 LMTK2Q8IWU2 1503 aa9.95□□□□□ -0.82
GBP3-208ENST00000493594 PTPRMP28827 1452 aa9.95□□□□□ -0.82
GBP3-208ENST00000493594 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.95□□□□□ -0.82
GBP3-208ENST00000493594 ATP8B2P98198 1209 aa9.95□□□□□ -0.82
GBP3-208ENST00000493594 GABPB1Q06547 395 aaPredicted RBP9.95□□□□□ -0.82
GBP3-208ENST00000493594 TTC6Q86TZ1 520 aa9.95□□□□□ -0.82
GBP3-208ENST00000493594 KIF18AQ8NI77 898 aa9.95□□□□□ -0.82
GBP3-208ENST00000493594 CACTINQ8WUQ7 758 aaKnown RBP9.95□□□□□ -0.82
GBP3-208ENST00000493594 COG3Q96JB2 828 aa9.95□□□□□ -0.82
GBP3-208ENST00000493594 NEXMIFQ5QGS0 1516 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 FOXO3O43524 673 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 TERF2Q15554 542 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 RTF1Q92541 710 aaKnown RBP9.94□□□□□ -0.82
GBP3-208ENST00000493594 DACT1Q9NYF0 836 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 TFIP11Q9UBB9 837 aaKnown RBP9.94□□□□□ -0.82
GBP3-208ENST00000493594 STAP2Q9UGK3 403 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 MORC2Q9Y6X9 1032 aaPredicted RBP9.94□□□□□ -0.82
GBP3-208ENST00000493594 CPSF1Q10570 1443 aaKnown RBP9.94□□□□□ -0.82
GBP3-208ENST00000493594 SSH2Q76I76 1423 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 SOX12O15370 315 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 SGSM2O43147 1006 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 PDE4CQ08493 712 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 ARID5BQ14865 1188 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 ADCK5Q3MIX3 580 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 CCDC144BQ3MJ40 725 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 CCDC144CPQ8IYA2 1237 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 TNMDQ9H2S6 317 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 HYPKQ9NX55 129 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 TSPYL4Q9UJ04 414 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 PAXBP1Q9Y5B6 917 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 KIDINS220Q9ULH0 1771 aa9.94□□□□□ -0.82
GBP3-208ENST00000493594 RAD50Q92878 1312 aa9.93□□□□□ -0.82
GBP3-208ENST00000493594 GOLGA6L4A6NEF3 574 aa9.93□□□□□ -0.82
GBP3-208ENST00000493594 USP27XA6NNY8 438 aa9.93□□□□□ -0.82
GBP3-208ENST00000493594 CDK11BP21127 795 aaKnown RBP9.93□□□□□ -0.82
GBP3-208ENST00000493594 KMT5BQ4FZB7 885 aa9.93□□□□□ -0.82
GBP3-208ENST00000493594 CEP135Q66GS9 1140 aa9.93□□□□□ -0.82
GBP3-208ENST00000493594 IL17RAQ96F46 866 aa9.93□□□□□ -0.82
GBP3-208ENST00000493594 LSG1Q9H089 658 aaKnown RBP9.93□□□□□ -0.82
GBP3-208ENST00000493594 ST7Q9NRC1 585 aa9.93□□□□□ -0.82
GBP3-208ENST00000493594 CLIP2Q9UDT6 1046 aa9.93□□□□□ -0.82
GBP3-208ENST00000493594 ARAP3Q8WWN8 1544 aa9.93□□□□□ -0.82
GBP3-208ENST00000493594 SURF6O75683 361 aaKnown RBP9.93□□□□□ -0.82
GBP3-208ENST00000493594 ZNF75DP51815 510 aa9.93□□□□□ -0.82
GBP3-208ENST00000493594 SYCP1Q15431 976 aa9.93□□□□□ -0.82
GBP3-208ENST00000493594 LARP1BQ659C4 914 aaKnown RBP9.93□□□□□ -0.82
GBP3-208ENST00000493594 JAKMIP1Q96N16 626 aaKnown RBP9.93□□□□□ -0.82
GBP3-208ENST00000493594 PDRG1Q9NUG6 133 aa9.93□□□□□ -0.82
GBP3-208ENST00000493594 ZNF215Q9UL58 517 aaPredicted RBP9.93□□□□□ -0.82
GBP3-208ENST00000493594 GNAI3P08754 354 aa9.92□□□□□ -0.82
GBP3-208ENST00000493594 EIF4A2Q14240 407 aaKnown RBP9.92□□□□□ -0.82
GBP3-208ENST00000493594 KRT222Q8N1A0 295 aa9.92□□□□□ -0.82
GBP3-208ENST00000493594 DNAJC25Q9H1X3 360 aa9.92□□□□□ -0.82
GBP3-208ENST00000493594 TRMT1Q9NXH9 659 aaKnown RBP9.92□□□□□ -0.82
GBP3-208ENST00000493594 KIF20BQ96Q89 1820 aa9.92□□□□□ -0.82
GBP3-208ENST00000493594 ZNF165P49910 485 aa9.92□□□□□ -0.82
GBP3-208ENST00000493594 KRT85P78386 507 aa9.92□□□□□ -0.82
GBP3-208ENST00000493594 IRX5P78411 483 aaPredicted RBP9.92□□□□□ -0.82
GBP3-208ENST00000493594 ME3Q16798 604 aa9.92□□□□□ -0.82
GBP3-208ENST00000493594 PRPF40BQ6NWY9 871 aaKnown RBP9.92□□□□□ -0.82
GBP3-208ENST00000493594 CDC37L1Q7L3B6 337 aa9.92□□□□□ -0.82
GBP3-208ENST00000493594 STK31Q9BXU1 1019 aa9.92□□□□□ -0.82
GBP3-208ENST00000493594 POGZQ7Z3K3 1410 aa9.91□□□□□ -0.82
GBP3-208ENST00000493594 FLIIQ13045 1269 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms