RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 C4AP0C0L4 1744 aa23.75■■□□□ 1.39
GTF3C2-212ENST00000493511 KCNQ3O43525 872 aa23.74■■□□□ 1.39
GTF3C2-212ENST00000493511 MMP10P09238 476 aa23.74■■□□□ 1.39
GTF3C2-212ENST00000493511 RIPK4P57078 832 aa23.74■■□□□ 1.39
GTF3C2-212ENST00000493511 LMOD3Q0VAK6 560 aa23.74■■□□□ 1.39
GTF3C2-212ENST00000493511 USP42Q9H9J4 1324 aaKnown RBP23.74■■□□□ 1.39
GTF3C2-212ENST00000493511 ZPR1O75312 459 aa23.73■■□□□ 1.39
GTF3C2-212ENST00000493511 RUNDC1Q96C34 613 aa23.73■■□□□ 1.39
GTF3C2-212ENST00000493511 ADAMTS8Q9UP79 889 aa23.73■■□□□ 1.39
GTF3C2-212ENST00000493511 COL15A1P39059 1388 aa23.73■■□□□ 1.39
GTF3C2-212ENST00000493511 CANXP27824 592 aaKnown RBP23.72■■□□□ 1.39
GTF3C2-212ENST00000493511 TMPOP42166 694 aaKnown RBP23.72■■□□□ 1.39
GTF3C2-212ENST00000493511 CCDC146Q8IYE0 955 aa23.72■■□□□ 1.39
GTF3C2-212ENST00000493511 SNRPA1P09661 255 aaKnown RBP23.71■■□□□ 1.39
GTF3C2-212ENST00000493511 SRP68Q9UHB9 627 aaKnown RBP23.71■■□□□ 1.39
GTF3C2-212ENST00000493511 ANP32CO43423 234 aa23.7■■□□□ 1.38
GTF3C2-212ENST00000493511 NLGN2Q8NFZ4 835 aa23.7■■□□□ 1.38
GTF3C2-212ENST00000493511 THUMPD2Q9BTF0 503 aaKnown RBP23.7■■□□□ 1.38
GTF3C2-212ENST00000493511 A0A087WZG4 1122 aa23.69■■□□□ 1.38
GTF3C2-212ENST00000493511 NPM2Q86SE8 214 aaKnown RBP23.69■■□□□ 1.38
GTF3C2-212ENST00000493511 MIS18AQ9NYP9 233 aa23.69■■□□□ 1.38
GTF3C2-212ENST00000493511 NARFQ9UHQ1 456 aa23.69■■□□□ 1.38
GTF3C2-212ENST00000493511 EIF5P55010 431 aaKnown RBP23.68■■□□□ 1.38
GTF3C2-212ENST00000493511 PARP3Q9Y6F1 533 aa23.68■■□□□ 1.38
GTF3C2-212ENST00000493511 IL6STP40189 918 aaPredicted RBP23.67■■□□□ 1.38
GTF3C2-212ENST00000493511 FKBP8Q14318 412 aa23.67■■□□□ 1.38
GTF3C2-212ENST00000493511 GPR162Q16538 588 aa23.67■■□□□ 1.38
GTF3C2-212ENST00000493511 USPL1Q5W0Q7 1092 aa23.67■■□□□ 1.38
GTF3C2-212ENST00000493511 NEUROD2Q15784 382 aa23.66■■□□□ 1.38
GTF3C2-212ENST00000493511 RRP7AQ9Y3A4 280 aaKnown RBP23.66■■□□□ 1.38
GTF3C2-212ENST00000493511 USP16Q9Y5T5 823 aa23.66■■□□□ 1.38
GTF3C2-212ENST00000493511 A1BGP04217 495 aa23.65■■□□□ 1.38
GTF3C2-212ENST00000493511 ZNF330Q9Y3S2 320 aaPredicted RBP23.65■■□□□ 1.38
GTF3C2-212ENST00000493511 PELP1Q8IZL8 1130 aaKnown RBP23.64■■□□□ 1.37
GTF3C2-212ENST00000493511 BABAM1Q9NWV8 329 aa23.64■■□□□ 1.37
GTF3C2-212ENST00000493511 KDM3BQ7LBC6 1761 aa23.64■■□□□ 1.37
GTF3C2-212ENST00000493511 PRAMEF22A3QJZ6 481 aa23.63■■□□□ 1.37
GTF3C2-212ENST00000493511 TSPYL4Q9UJ04 414 aa23.63■■□□□ 1.37
GTF3C2-212ENST00000493511 EIF4A1P60842 406 aaKnown RBP23.62■■□□□ 1.37
GTF3C2-212ENST00000493511 C10orf71Q711Q0 1435 aa23.6■■□□□ 1.37
GTF3C2-212ENST00000493511 GIGYF1O75420 1035 aaPredicted RBP23.6■■□□□ 1.37
GTF3C2-212ENST00000493511 TM4SF1P30408 202 aa23.6■■□□□ 1.37
GTF3C2-212ENST00000493511 DDR1Q08345 913 aa23.6■■□□□ 1.37
GTF3C2-212ENST00000493511 TGFB2P61812 414 aa23.59■■□□□ 1.37
GTF3C2-212ENST00000493511 TRIM35Q9UPQ4 493 aa23.59■■□□□ 1.37
GTF3C2-212ENST00000493511 TBC1D2BQ9UPU7 963 aa23.59■■□□□ 1.37
GTF3C2-212ENST00000493511 POLRMTO00411 1230 aaKnown RBP23.58■■□□□ 1.37
GTF3C2-212ENST00000493511 GRIN3BO60391 1043 aa23.58■■□□□ 1.37
GTF3C2-212ENST00000493511 NFIXQ14938 502 aa23.58■■□□□ 1.37
GTF3C2-212ENST00000493511 BCL2L12Q9HB09 334 aa23.58■■□□□ 1.37
GTF3C2-212ENST00000493511 MRS2Q9HD23 443 aa23.58■■□□□ 1.37
GTF3C2-212ENST00000493511 KIF13BQ9NQT8 1826 aa23.58■■□□□ 1.37
GTF3C2-212ENST00000493511 LAMB4A4D0S4 1761 aa23.57■■□□□ 1.36
GTF3C2-212ENST00000493511 YY1P25490 414 aa23.57■■□□□ 1.36
GTF3C2-212ENST00000493511 CCDC184Q52MB2 194 aa23.57■■□□□ 1.36
GTF3C2-212ENST00000493511 DZIP3Q86Y13 1208 aaKnown RBP23.57■■□□□ 1.36
GTF3C2-212ENST00000493511 APAF1O14727 1248 aa23.56■■□□□ 1.36
GTF3C2-212ENST00000493511 PIP4K2AP48426 406 aaPredicted RBP23.56■■□□□ 1.36
GTF3C2-212ENST00000493511 SCN7AQ01118 1682 aa23.55■■□□□ 1.36
GTF3C2-212ENST00000493511 NBPF26B4DH59 902 aa23.55■■□□□ 1.36
GTF3C2-212ENST00000493511 YBX3P16989 372 aaKnown RBP eCLIP23.55■■□□□ 1.36
GTF3C2-212ENST00000493511 NBPF10Q6P3W6 841 aaKnown RBP23.55■■□□□ 1.36
GTF3C2-212ENST00000493511 NBPF15Q8N660 670 aa23.55■■□□□ 1.36
GTF3C2-212ENST00000493511 CHL1O00533 1208 aa23.54■■□□□ 1.36
GTF3C2-212ENST00000493511 CAMTA2O94983 1202 aa23.54■■□□□ 1.36
GTF3C2-212ENST00000493511 PXDNLA1KZ92 1463 aa23.54■■□□□ 1.36
GTF3C2-212ENST00000493511 CALD1Q05682 793 aaKnown RBP23.53■■□□□ 1.36
GTF3C2-212ENST00000493511 ZNF652Q9Y2D9 606 aa23.53■■□□□ 1.36
GTF3C2-212ENST00000493511 LAS1LQ9Y4W2 734 aaKnown RBP23.53■■□□□ 1.36
GTF3C2-212ENST00000493511 SERPINB2P05120 415 aa23.52■■□□□ 1.36
GTF3C2-212ENST00000493511 CLEC4GQ6UXB4 293 aa23.52■■□□□ 1.36
GTF3C2-212ENST00000493511 BICDL1Q6ZP65 573 aa23.52■■□□□ 1.36
GTF3C2-212ENST00000493511 CHD4Q14839 1912 aa23.51■■□□□ 1.35
GTF3C2-212ENST00000493511 A0A0G2JLW4 131 aa23.51■■□□□ 1.35
GTF3C2-212ENST00000493511 RGL2O15211 777 aa23.51■■□□□ 1.35
GTF3C2-212ENST00000493511 TBC1D9BQ66K14 1250 aa23.51■■□□□ 1.35
GTF3C2-212ENST00000493511 CFAP44Q96MT7 982 aa23.51■■□□□ 1.35
GTF3C2-212ENST00000493511 ERBB4Q15303 1308 aa23.51■■□□□ 1.35
GTF3C2-212ENST00000493511 CARMIL3Q8ND23 1372 aa23.51■■□□□ 1.35
GTF3C2-212ENST00000493511 SETDB2Q96T68 719 aa23.5■■□□□ 1.35
GTF3C2-212ENST00000493511 DPEP1P16444 411 aa23.49■■□□□ 1.35
GTF3C2-212ENST00000493511 BCORQ6W2J9 1755 aa23.49■■□□□ 1.35
GTF3C2-212ENST00000493511 KIAA1551Q9HCM1 1747 aa23.48■■□□□ 1.35
GTF3C2-212ENST00000493511 NRXN2Q9P2S2 1712 aa23.48■■□□□ 1.35
GTF3C2-212ENST00000493511 N4BP2Q86UW6 1770 aaPredicted RBP23.48■■□□□ 1.35
GTF3C2-212ENST00000493511 AFDNP55196 1824 aaKnown RBP23.48■■□□□ 1.35
GTF3C2-212ENST00000493511 WWC3Q9ULE0 1092 aa23.48■■□□□ 1.35
GTF3C2-212ENST00000493511 MYL6BP14649 208 aa23.47■■□□□ 1.35
GTF3C2-212ENST00000493511 EIF2S2P20042 333 aaKnown RBP23.46■■□□□ 1.35
GTF3C2-212ENST00000493511 KIF6Q6ZMV9 814 aa23.46■■□□□ 1.35
GTF3C2-212ENST00000493511 NGEFQ8N5V2 710 aa23.46■■□□□ 1.35
GTF3C2-212ENST00000493511 IFT57Q9NWB7 429 aa23.46■■□□□ 1.35
GTF3C2-212ENST00000493511 NPHP1O15259 732 aa23.45■■□□□ 1.34
GTF3C2-212ENST00000493511 GNAI1P63096 354 aa23.45■■□□□ 1.34
GTF3C2-212ENST00000493511 PIM2Q9P1W9 311 aa23.45■■□□□ 1.34
GTF3C2-212ENST00000493511 BCS1LQ9Y276 419 aa23.45■■□□□ 1.34
GTF3C2-212ENST00000493511 ERVV-1B6SEH8 477 aa23.44■■□□□ 1.34
GTF3C2-212ENST00000493511 HOXB7P09629 217 aa23.44■■□□□ 1.34
GTF3C2-212ENST00000493511 ZNF853P0CG23 659 aa23.43■■□□□ 1.34
GTF3C2-212ENST00000493511 KCNA3P22001 575 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms