RNA–Protein interactions for RNA: ENST00000493132.1

MMP11-213, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-213ENST00000493132 RIPK4P57078 832 aa18.44■□□□□ 0.54
MMP11-213ENST00000493132 NEUROD2Q15784 382 aa18.44■□□□□ 0.54
MMP11-213ENST00000493132 MIS18AQ9NYP9 233 aa18.44■□□□□ 0.54
MMP11-213ENST00000493132 SRP68Q9UHB9 627 aaKnown RBP18.44■□□□□ 0.54
MMP11-213ENST00000493132 ADAMTS8Q9UP79 889 aa18.44■□□□□ 0.54
MMP11-213ENST00000493132 ZNF330Q9Y3S2 320 aaPredicted RBP18.44■□□□□ 0.54
MMP11-213ENST00000493132 SOS1Q07889 1333 aaPredicted RBP18.44■□□□□ 0.54
MMP11-213ENST00000493132 STARD3NLO95772 234 aa18.43■□□□□ 0.54
MMP11-213ENST00000493132 RUNDC1Q96C34 613 aa18.43■□□□□ 0.54
MMP11-213ENST00000493132 DCAF8L1A6NGE4 600 aa18.42■□□□□ 0.54
MMP11-213ENST00000493132 MMP10P09238 476 aa18.42■□□□□ 0.54
MMP11-213ENST00000493132 TMPOP42166 694 aaKnown RBP18.42■□□□□ 0.54
MMP11-213ENST00000493132 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
MMP11-213ENST00000493132 SCN7AQ01118 1682 aa18.41■□□□□ 0.54
MMP11-213ENST00000493132 GYS1P13807 737 aa18.41■□□□□ 0.54
MMP11-213ENST00000493132 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
MMP11-213ENST00000493132 CCDC184Q52MB2 194 aa18.41■□□□□ 0.54
MMP11-213ENST00000493132 USP42Q9H9J4 1324 aaKnown RBP18.41■□□□□ 0.54
MMP11-213ENST00000493132 PRAMEF22A3QJZ6 481 aa18.4■□□□□ 0.54
MMP11-213ENST00000493132 PELP1Q8IZL8 1130 aaKnown RBP18.4■□□□□ 0.54
MMP11-213ENST00000493132 NLGN2Q8NFZ4 835 aa18.4■□□□□ 0.54
MMP11-213ENST00000493132 ZPR1O75312 459 aa18.39■□□□□ 0.53
MMP11-213ENST00000493132 PNISRQ8TF01 805 aaKnown RBP18.39■□□□□ 0.53
MMP11-213ENST00000493132 TEX13AQ9BXU3 409 aaPredicted RBP18.39■□□□□ 0.53
MMP11-213ENST00000493132 SNRPA1P09661 255 aaKnown RBP18.38■□□□□ 0.53
MMP11-213ENST00000493132 PIP4K2AP48426 406 aaPredicted RBP18.38■□□□□ 0.53
MMP11-213ENST00000493132 NLGN1Q8N2Q7 840 aa18.38■□□□□ 0.53
MMP11-213ENST00000493132 MRS2Q9HD23 443 aa18.38■□□□□ 0.53
MMP11-213ENST00000493132 BCORQ6W2J9 1755 aa18.37■□□□□ 0.53
MMP11-213ENST00000493132 A1BGP04217 495 aa18.37■□□□□ 0.53
MMP11-213ENST00000493132 FKBP8Q14318 412 aa18.37■□□□□ 0.53
MMP11-213ENST00000493132 USPL1Q5W0Q7 1092 aa18.37■□□□□ 0.53
MMP11-213ENST00000493132 TSPYL4Q9UJ04 414 aa18.37■□□□□ 0.53
MMP11-213ENST00000493132 NPM2Q86SE8 214 aaKnown RBP18.36■□□□□ 0.53
MMP11-213ENST00000493132 KIF13BQ9NQT8 1826 aa18.36■□□□□ 0.53
MMP11-213ENST00000493132 USP16Q9Y5T5 823 aa18.36■□□□□ 0.53
MMP11-213ENST00000493132 N4BP2Q86UW6 1770 aaPredicted RBP18.35■□□□□ 0.53
MMP11-213ENST00000493132 LAS1LQ9Y4W2 734 aaKnown RBP18.35■□□□□ 0.53
MMP11-213ENST00000493132 PARP3Q9Y6F1 533 aa18.35■□□□□ 0.53
MMP11-213ENST00000493132 AFDNP55196 1824 aaKnown RBP18.35■□□□□ 0.53
MMP11-213ENST00000493132 GPR162Q16538 588 aa18.34■□□□□ 0.53
MMP11-213ENST00000493132 NARFQ9UHQ1 456 aa18.34■□□□□ 0.53
MMP11-213ENST00000493132 WWC3Q9ULE0 1092 aa18.34■□□□□ 0.53
MMP11-213ENST00000493132 CD2APQ9Y5K6 639 aa18.34■□□□□ 0.53
MMP11-213ENST00000493132 C10orf71Q711Q0 1435 aa18.33■□□□□ 0.53
MMP11-213ENST00000493132 A0A087WZG4 1122 aa18.33■□□□□ 0.52
MMP11-213ENST00000493132 SENP3-EIF4A1A0A087X0R7 540 aa18.33■□□□□ 0.52
MMP11-213ENST00000493132 APAF1O14727 1248 aa18.33■□□□□ 0.52
MMP11-213ENST00000493132 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.52
MMP11-213ENST00000493132 KIAA1551Q9HCM1 1747 aa18.32■□□□□ 0.52
MMP11-213ENST00000493132 IL6STP40189 918 aaPredicted RBP18.32■□□□□ 0.52
MMP11-213ENST00000493132 EIF4A1P60842 406 aaKnown RBP18.32■□□□□ 0.52
MMP11-213ENST00000493132 DDR1Q08345 913 aa18.32■□□□□ 0.52
MMP11-213ENST00000493132 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
MMP11-213ENST00000493132 TBC1D2BQ9UPU7 963 aa18.32■□□□□ 0.52
MMP11-213ENST00000493132 GOLGB1Q14789 3259 aaKnown RBP18.32■□□□□ 0.52
MMP11-213ENST00000493132 CHD4Q14839 1912 aa18.31■□□□□ 0.52
MMP11-213ENST00000493132 BICDL1Q6ZP65 573 aa18.3■□□□□ 0.52
MMP11-213ENST00000493132 PXDNLA1KZ92 1463 aa18.29■□□□□ 0.52
MMP11-213ENST00000493132 GIGYF1O75420 1035 aaPredicted RBP18.29■□□□□ 0.52
MMP11-213ENST00000493132 NFIXQ14938 502 aa18.29■□□□□ 0.52
MMP11-213ENST00000493132 DZIP3Q86Y13 1208 aaKnown RBP18.29■□□□□ 0.52
MMP11-213ENST00000493132 BCL2L12Q9HB09 334 aa18.29■□□□□ 0.52
MMP11-213ENST00000493132 NBPF26B4DH59 902 aa18.28■□□□□ 0.52
MMP11-213ENST00000493132 POLRMTO00411 1230 aaKnown RBP18.28■□□□□ 0.52
MMP11-213ENST00000493132 NBPF10Q6P3W6 841 aaKnown RBP18.28■□□□□ 0.52
MMP11-213ENST00000493132 MIER1Q8N108 512 aa18.28■□□□□ 0.52
MMP11-213ENST00000493132 NBPF15Q8N660 670 aa18.28■□□□□ 0.52
MMP11-213ENST00000493132 NRXN2Q9P2S2 1712 aa18.28■□□□□ 0.52
MMP11-213ENST00000493132 UTRNP46939 3433 aa18.27■□□□□ 0.52
MMP11-213ENST00000493132 NGEFQ8N5V2 710 aa18.27■□□□□ 0.52
MMP11-213ENST00000493132 BRCA1P38398 1863 aaKnown RBP18.26■□□□□ 0.51
MMP11-213ENST00000493132 CAMTA2O94983 1202 aa18.26■□□□□ 0.51
MMP11-213ENST00000493132 MYL6BP14649 208 aa18.26■□□□□ 0.51
MMP11-213ENST00000493132 YBX3P16989 372 aaKnown RBP eCLIP18.26■□□□□ 0.51
MMP11-213ENST00000493132 TBC1D9BQ66K14 1250 aa18.26■□□□□ 0.51
MMP11-213ENST00000493132 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
MMP11-213ENST00000493132 EIF2S2P20042 333 aaKnown RBP18.25■□□□□ 0.51
MMP11-213ENST00000493132 TM4SF1P30408 202 aa18.25■□□□□ 0.51
MMP11-213ENST00000493132 KRT24Q2M2I5 525 aa18.25■□□□□ 0.51
MMP11-213ENST00000493132 NECTIN2Q92692 538 aa18.25■□□□□ 0.51
MMP11-213ENST00000493132 CHL1O00533 1208 aa18.24■□□□□ 0.51
MMP11-213ENST00000493132 YY1P25490 414 aa18.24■□□□□ 0.51
MMP11-213ENST00000493132 FAM9BQ8IZU0 186 aa18.24■□□□□ 0.51
MMP11-213ENST00000493132 CARMIL3Q8ND23 1372 aa18.24■□□□□ 0.51
MMP11-213ENST00000493132 ANKRD31Q8N7Z5 1873 aa18.24■□□□□ 0.51
MMP11-213ENST00000493132 NUP98P52948 1817 aa18.23■□□□□ 0.51
MMP11-213ENST00000493132 A0A0G2JLW4 131 aa18.23■□□□□ 0.51
MMP11-213ENST00000493132 NPHP1O15259 732 aa18.23■□□□□ 0.51
MMP11-213ENST00000493132 SERPINB2P05120 415 aa18.23■□□□□ 0.51
MMP11-213ENST00000493132 CALD1Q05682 793 aaKnown RBP18.23■□□□□ 0.51
MMP11-213ENST00000493132 ZNF652Q9Y2D9 606 aa18.23■□□□□ 0.51
MMP11-213ENST00000493132 DPEP1P16444 411 aa18.22■□□□□ 0.51
MMP11-213ENST00000493132 KIF6Q6ZMV9 814 aa18.22■□□□□ 0.51
MMP11-213ENST00000493132 MBIPQ9NS73 344 aa18.22■□□□□ 0.51
MMP11-213ENST00000493132 DLEC1Q9Y238 1755 aa18.22■□□□□ 0.51
MMP11-213ENST00000493132 COL11A2P13942 1736 aaPredicted RBP18.21■□□□□ 0.51
MMP11-213ENST00000493132 ANXA1P04083 346 aa18.21■□□□□ 0.51
MMP11-213ENST00000493132 CFAP44Q96MT7 982 aa18.21■□□□□ 0.51
MMP11-213ENST00000493132 SALL2Q9Y467 1007 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms