RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 STK32BQ9NY57 414 aa9□□□□□ -0.97
HERC4-211ENST00000492996 NOP58Q9Y2X3 529 aaKnown RBP9□□□□□ -0.97
HERC4-211ENST00000492996 IL13P35225 146 aa8.99□□□□□ -0.97
HERC4-211ENST00000492996 MAPK8IP3Q9UPT6 1336 aa8.99□□□□□ -0.97
HERC4-211ENST00000492996 ZCRB1Q8TBF4 217 aaKnown RBP8.99□□□□□ -0.97
HERC4-211ENST00000492996 BACH2Q9BYV9 841 aa8.99□□□□□ -0.97
HERC4-211ENST00000492996 PALLDQ8WX93 1383 aa8.99□□□□□ -0.97
HERC4-211ENST00000492996 CENPQQ7L2Z9 268 aaPredicted RBP8.98□□□□□ -0.97
HERC4-211ENST00000492996 CABLES1Q8TDN4 633 aa8.98□□□□□ -0.97
HERC4-211ENST00000492996 SSC5DA1L4H1 1573 aa8.98□□□□□ -0.97
HERC4-211ENST00000492996 DIAPH1O60610 1272 aaKnown RBP8.98□□□□□ -0.97
HERC4-211ENST00000492996 PHKG2P15735 406 aa8.98□□□□□ -0.97
HERC4-211ENST00000492996 RARSP54136 660 aaKnown RBP8.98□□□□□ -0.97
HERC4-211ENST00000492996 DCAF5Q96JK2 942 aa8.98□□□□□ -0.97
HERC4-211ENST00000492996 KDM2BQ8NHM5 1336 aa8.98□□□□□ -0.97
HERC4-211ENST00000492996 WDR63Q8IWG1 891 aa8.98□□□□□ -0.97
HERC4-211ENST00000492996 IPO9Q96P70 1041 aaKnown RBP8.98□□□□□ -0.97
HERC4-211ENST00000492996 ZBTB47Q9UFB7 747 aaPredicted RBP8.98□□□□□ -0.97
HERC4-211ENST00000492996 HMOX1P09601 288 aa8.97□□□□□ -0.97
HERC4-211ENST00000492996 TMPOP42166 694 aaKnown RBP8.97□□□□□ -0.97
HERC4-211ENST00000492996 NME9Q86XW9 330 aa8.97□□□□□ -0.97
HERC4-211ENST00000492996 POLKQ9UBT6 870 aa8.97□□□□□ -0.97
HERC4-211ENST00000492996 SPG7Q9UQ90 795 aa8.97□□□□□ -0.97
HERC4-211ENST00000492996 IGHDP01880 384 aa8.97□□□□□ -0.97
HERC4-211ENST00000492996 MS4A1P11836 297 aa8.97□□□□□ -0.97
HERC4-211ENST00000492996 MYH3P11055 1940 aa8.97□□□□□ -0.97
HERC4-211ENST00000492996 A0A0U1RQG5 324 aaPredicted RBP8.96□□□□□ -0.97
HERC4-211ENST00000492996 RLBP1P12271 317 aa8.96□□□□□ -0.97
HERC4-211ENST00000492996 RIPK4P57078 832 aa8.96□□□□□ -0.97
HERC4-211ENST00000492996 MYH16Q9H6N6 1097 aa8.96□□□□□ -0.97
HERC4-211ENST00000492996 EMILIN1Q9Y6C2 1016 aa8.96□□□□□ -0.97
HERC4-211ENST00000492996 APBA3O96018 575 aa8.96□□□□□ -0.97
HERC4-211ENST00000492996 LAS1LQ9Y4W2 734 aaKnown RBP8.96□□□□□ -0.97
HERC4-211ENST00000492996 GRIN3BO60391 1043 aa8.96□□□□□ -0.98
HERC4-211ENST00000492996 EXOSC9Q06265 439 aaKnown RBP8.96□□□□□ -0.98
HERC4-211ENST00000492996 MMP14P50281 582 aa8.95□□□□□ -0.98
HERC4-211ENST00000492996 ZNF827Q17R98 1081 aa8.95□□□□□ -0.98
HERC4-211ENST00000492996 PLEKHF1Q96S99 279 aa8.95□□□□□ -0.98
HERC4-211ENST00000492996 SOX12O15370 315 aa8.95□□□□□ -0.98
HERC4-211ENST00000492996 EN1Q05925 392 aaPredicted RBP8.95□□□□□ -0.98
HERC4-211ENST00000492996 PDE3AQ14432 1141 aa8.95□□□□□ -0.98
HERC4-211ENST00000492996 RRS1Q15050 365 aaKnown RBP8.95□□□□□ -0.98
HERC4-211ENST00000492996 LRRC4BQ9NT99 713 aa8.95□□□□□ -0.98
HERC4-211ENST00000492996 TRIM35Q9UPQ4 493 aa8.95□□□□□ -0.98
HERC4-211ENST00000492996 TM4SF1P30408 202 aa8.95□□□□□ -0.98
HERC4-211ENST00000492996 PRKAR2BP31323 418 aa8.95□□□□□ -0.98
HERC4-211ENST00000492996 CCDC27Q2M243 656 aa8.95□□□□□ -0.98
HERC4-211ENST00000492996 LMOD2Q6P5Q4 547 aa8.95□□□□□ -0.98
HERC4-211ENST00000492996 NECTIN2Q92692 538 aa8.95□□□□□ -0.98
HERC4-211ENST00000492996 TAF1P21675 1872 aa8.94□□□□□ -0.98
HERC4-211ENST00000492996 EVA1CP58658 441 aa8.94□□□□□ -0.98
HERC4-211ENST00000492996 THUMPD2Q9BTF0 503 aaKnown RBP8.94□□□□□ -0.98
HERC4-211ENST00000492996 AKAP4Q5JQC9 854 aa8.94□□□□□ -0.98
HERC4-211ENST00000492996 SMC4Q9NTJ3 1288 aa8.94□□□□□ -0.98
HERC4-211ENST00000492996 CYP27B1O15528 508 aa8.93□□□□□ -0.98
HERC4-211ENST00000492996 ZMYND15Q9H091 742 aa8.93□□□□□ -0.98
HERC4-211ENST00000492996 COL15A1P39059 1388 aa8.93□□□□□ -0.98
HERC4-211ENST00000492996 COL1A1P02452 1464 aaPredicted RBP8.93□□□□□ -0.98
HERC4-211ENST00000492996 NEFMP07197 916 aa8.93□□□□□ -0.98
HERC4-211ENST00000492996 TATP17735 454 aaPredicted RBP8.93□□□□□ -0.98
HERC4-211ENST00000492996 NBPF6Q5VWK0 638 aa8.93□□□□□ -0.98
HERC4-211ENST00000492996 NBPF4Q96M43 638 aa8.93□□□□□ -0.98
HERC4-211ENST00000492996 FTSJ3Q8IY81 847 aaKnown RBP8.93□□□□□ -0.98
HERC4-211ENST00000492996 PHACTR3Q96KR7 559 aa8.93□□□□□ -0.98
HERC4-211ENST00000492996 TOM1L2Q6ZVM7 507 aa8.92□□□□□ -0.98
HERC4-211ENST00000492996 IFNL2Q8IZJ0 200 aa8.92□□□□□ -0.98
HERC4-211ENST00000492996 RPS6KA4O75676 772 aa8.92□□□□□ -0.98
HERC4-211ENST00000492996 TRIM37O94972 964 aa8.92□□□□□ -0.98
HERC4-211ENST00000492996 XPCQ01831 940 aaPredicted RBP8.92□□□□□ -0.98
HERC4-211ENST00000492996 DEFB132Q7Z7B7 95 aa8.92□□□□□ -0.98
HERC4-211ENST00000492996 PCDHB15Q9Y5E8 787 aa8.92□□□□□ -0.98
HERC4-211ENST00000492996 CCDC88AQ3V6T2 1871 aa8.92□□□□□ -0.98
HERC4-211ENST00000492996 ELL2O00472 640 aaPredicted RBP8.92□□□□□ -0.98
HERC4-211ENST00000492996 SSH1Q8WYL5 1049 aa8.92□□□□□ -0.98
HERC4-211ENST00000492996 JMYQ8N9B5 988 aa8.91□□□□□ -0.98
HERC4-211ENST00000492996 TEX13AQ9BXU3 409 aaPredicted RBP8.91□□□□□ -0.98
HERC4-211ENST00000492996 SLC4A3P48751 1232 aa8.91□□□□□ -0.98
HERC4-211ENST00000492996 ZKSCAN2Q63HK3 967 aa8.91□□□□□ -0.98
HERC4-211ENST00000492996 FCHSD2O94868 740 aa8.9□□□□□ -0.98
HERC4-211ENST00000492996 FSTL1Q12841 308 aa8.9□□□□□ -0.98
HERC4-211ENST00000492996 EIF4A2Q14240 407 aaKnown RBP8.9□□□□□ -0.98
HERC4-211ENST00000492996 FAM161AQ3B820 660 aa8.9□□□□□ -0.98
HERC4-211ENST00000492996 RSPH6AQ9H0K4 717 aa8.9□□□□□ -0.98
HERC4-211ENST00000492996 ITPRIPQ8IWB1 547 aa8.9□□□□□ -0.99
HERC4-211ENST00000492996 DZIP1LQ8IYY4 767 aaKnown RBP8.9□□□□□ -0.99
HERC4-211ENST00000492996 USP42Q9H9J4 1324 aaKnown RBP8.9□□□□□ -0.99
HERC4-211ENST00000492996 A0A087WZG4 1122 aa8.89□□□□□ -0.99
HERC4-211ENST00000492996 C8orf34Q49A92 452 aa8.89□□□□□ -0.99
HERC4-211ENST00000492996 PNNQ9H307 717 aaKnown RBP8.89□□□□□ -0.99
HERC4-211ENST00000492996 CDHR2Q9BYE9 1310 aa8.89□□□□□ -0.99
HERC4-211ENST00000492996 TRIM27P14373 513 aa8.89□□□□□ -0.99
HERC4-211ENST00000492996 CHRNA2Q15822 529 aa8.89□□□□□ -0.99
HERC4-211ENST00000492996 NOB1Q9ULX3 412 aaKnown RBP8.89□□□□□ -0.99
HERC4-211ENST00000492996 RTL9Q8NET4 1388 aa8.89□□□□□ -0.99
HERC4-211ENST00000492996 HOXB7P09629 217 aa8.89□□□□□ -0.99
HERC4-211ENST00000492996 RBM46Q8TBY0 533 aaKnown RBP8.89□□□□□ -0.99
HERC4-211ENST00000492996 ATG3Q9NT62 314 aa8.89□□□□□ -0.99
HERC4-211ENST00000492996 DCTN1Q14203 1278 aa8.88□□□□□ -0.99
HERC4-211ENST00000492996 MVPQ14764 893 aaKnown RBP8.88□□□□□ -0.99
HERC4-211ENST00000492996 ARXQ96QS3 562 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms