RNA–Protein interactions for RNA: ENST00000492979.2

SSC4D-202, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

TSL 5

Gene SSC4D, Length 1,224 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-202ENST00000492979 TAF7Q15545 349 aaPredicted RBP25.03■■□□□ 1.6
SSC4D-202ENST00000492979 NFE2L2Q16236 605 aa25.03■■□□□ 1.6
SSC4D-202ENST00000492979 KLHL34Q8N239 644 aa25.03■■□□□ 1.6
SSC4D-202ENST00000492979 ZBTB1Q9Y2K1 713 aa25.03■■□□□ 1.6
SSC4D-202ENST00000492979 CHD4Q14839 1912 aa25.03■■□□□ 1.6
SSC4D-202ENST00000492979 MCM10Q7L590 875 aa25.02■■□□□ 1.6
SSC4D-202ENST00000492979 ZPR1O75312 459 aa25.01■■□□□ 1.59
SSC4D-202ENST00000492979 IL6STP40189 918 aaPredicted RBP25.01■■□□□ 1.59
SSC4D-202ENST00000492979 PRKRIP1Q9H875 184 aaPredicted RBP25.01■■□□□ 1.59
SSC4D-202ENST00000492979 PARP3Q9Y6F1 533 aa25.01■■□□□ 1.59
SSC4D-202ENST00000492979 COL15A1P39059 1388 aa25.01■■□□□ 1.59
SSC4D-202ENST00000492979 C10orf71Q711Q0 1435 aa25.01■■□□□ 1.59
SSC4D-202ENST00000492979 A0A087WZG4 1122 aa25■■□□□ 1.59
SSC4D-202ENST00000492979 FKBP8Q14318 412 aa25■■□□□ 1.59
SSC4D-202ENST00000492979 PNISRQ8TF01 805 aaKnown RBP25■■□□□ 1.59
SSC4D-202ENST00000492979 SRP68Q9UHB9 627 aaKnown RBP24.99■■□□□ 1.59
SSC4D-202ENST00000492979 SNRPA1P09661 255 aaKnown RBP24.98■■□□□ 1.59
SSC4D-202ENST00000492979 YBX3P16989 372 aaKnown RBP eCLIP24.98■■□□□ 1.59
SSC4D-202ENST00000492979 RGL2O15211 777 aa24.97■■□□□ 1.59
SSC4D-202ENST00000492979 KCNQ3O43525 872 aa24.97■■□□□ 1.59
SSC4D-202ENST00000492979 MAPK8IP3Q9UPT6 1336 aa24.96■■□□□ 1.59
SSC4D-202ENST00000492979 DCTN1Q14203 1278 aa24.96■■□□□ 1.59
SSC4D-202ENST00000492979 USPL1Q5W0Q7 1092 aa24.96■■□□□ 1.59
SSC4D-202ENST00000492979 BCL2L12Q9HB09 334 aa24.96■■□□□ 1.59
SSC4D-202ENST00000492979 BABAM1Q9NWV8 329 aa24.96■■□□□ 1.59
SSC4D-202ENST00000492979 POLRMTO00411 1230 aaKnown RBP24.95■■□□□ 1.58
SSC4D-202ENST00000492979 DDR1Q08345 913 aa24.95■■□□□ 1.58
SSC4D-202ENST00000492979 DLG5Q8TDM6 1919 aa24.94■■□□□ 1.58
SSC4D-202ENST00000492979 PXDNLA1KZ92 1463 aa24.94■■□□□ 1.58
SSC4D-202ENST00000492979 CANXP27824 592 aaKnown RBP24.93■■□□□ 1.58
SSC4D-202ENST00000492979 USP16Q9Y5T5 823 aa24.93■■□□□ 1.58
SSC4D-202ENST00000492979 KIAA1551Q9HCM1 1747 aa24.92■■□□□ 1.58
SSC4D-202ENST00000492979 A1BGP04217 495 aa24.91■■□□□ 1.58
SSC4D-202ENST00000492979 NFIXQ14938 502 aa24.91■■□□□ 1.58
SSC4D-202ENST00000492979 KCNA3P22001 575 aa24.9■■□□□ 1.58
SSC4D-202ENST00000492979 TMPOP42166 694 aaKnown RBP24.9■■□□□ 1.58
SSC4D-202ENST00000492979 LMOD3Q0VAK6 560 aa24.9■■□□□ 1.58
SSC4D-202ENST00000492979 NRXN2Q9P2S2 1712 aa24.89■■□□□ 1.58
SSC4D-202ENST00000492979 RIPK4P57078 832 aa24.88■■□□□ 1.57
SSC4D-202ENST00000492979 EIF4A1P60842 406 aaKnown RBP24.88■■□□□ 1.57
SSC4D-202ENST00000492979 CLEC4GQ6UXB4 293 aa24.88■■□□□ 1.57
SSC4D-202ENST00000492979 PELP1Q8IZL8 1130 aaKnown RBP24.88■■□□□ 1.57
SSC4D-202ENST00000492979 ZNF784Q8NCA9 323 aaPredicted RBP24.88■■□□□ 1.57
SSC4D-202ENST00000492979 RUNDC1Q96C34 613 aa24.88■■□□□ 1.57
SSC4D-202ENST00000492979 KDM3BQ7LBC6 1761 aa24.88■■□□□ 1.57
SSC4D-202ENST00000492979 GIGYF1O75420 1035 aaPredicted RBP24.87■■□□□ 1.57
SSC4D-202ENST00000492979 CAMTA2O94983 1202 aa24.86■■□□□ 1.57
SSC4D-202ENST00000492979 A0A0G2JLW4 131 aa24.85■■□□□ 1.57
SSC4D-202ENST00000492979 SERPINB2P05120 415 aa24.85■■□□□ 1.57
SSC4D-202ENST00000492979 DPEP1P16444 411 aa24.85■■□□□ 1.57
SSC4D-202ENST00000492979 WDR43Q15061 677 aaKnown RBP eCLIP24.85■■□□□ 1.57
SSC4D-202ENST00000492979 NPM2Q86SE8 214 aaKnown RBP24.85■■□□□ 1.57
SSC4D-202ENST00000492979 ADAMTS8Q9UP79 889 aa24.85■■□□□ 1.57
SSC4D-202ENST00000492979 BRCA1P38398 1863 aaKnown RBP24.84■■□□□ 1.57
SSC4D-202ENST00000492979 PRAMEF22A3QJZ6 481 aa24.84■■□□□ 1.57
SSC4D-202ENST00000492979 PDZRN3Q9UPQ7 1066 aa24.84■■□□□ 1.57
SSC4D-202ENST00000492979 NBPF26B4DH59 902 aa24.83■■□□□ 1.57
SSC4D-202ENST00000492979 NBPF10Q6P3W6 841 aaKnown RBP24.83■■□□□ 1.57
SSC4D-202ENST00000492979 NBPF15Q8N660 670 aa24.83■■□□□ 1.57
SSC4D-202ENST00000492979 MIS18AQ9NYP9 233 aa24.83■■□□□ 1.57
SSC4D-202ENST00000492979 PIM2Q9P1W9 311 aa24.83■■□□□ 1.57
SSC4D-202ENST00000492979 TBC1D2BQ9UPU7 963 aa24.83■■□□□ 1.57
SSC4D-202ENST00000492979 SCN7AQ01118 1682 aa24.82■■□□□ 1.56
SSC4D-202ENST00000492979 ERBB4Q15303 1308 aa24.82■■□□□ 1.56
SSC4D-202ENST00000492979 ZNF316A6NFI3 1004 aaPredicted RBP24.81■■□□□ 1.56
SSC4D-202ENST00000492979 DZIP3Q86Y13 1208 aaKnown RBP24.81■■□□□ 1.56
SSC4D-202ENST00000492979 THUMPD2Q9BTF0 503 aaKnown RBP24.81■■□□□ 1.56
SSC4D-202ENST00000492979 AFDNP55196 1824 aaKnown RBP24.81■■□□□ 1.56
SSC4D-202ENST00000492979 N4BP2Q86UW6 1770 aaPredicted RBP24.8■■□□□ 1.56
SSC4D-202ENST00000492979 TBC1D9BQ66K14 1250 aa24.8■■□□□ 1.56
SSC4D-202ENST00000492979 CARMIL3Q8ND23 1372 aa24.8■■□□□ 1.56
SSC4D-202ENST00000492979 TRIM35Q9UPQ4 493 aa24.79■■□□□ 1.56
SSC4D-202ENST00000492979 ADCY9O60503 1353 aa24.79■■□□□ 1.56
SSC4D-202ENST00000492979 LAMB4A4D0S4 1761 aa24.78■■□□□ 1.56
SSC4D-202ENST00000492979 CHL1O00533 1208 aa24.78■■□□□ 1.56
SSC4D-202ENST00000492979 SETDB2Q96T68 719 aa24.78■■□□□ 1.56
SSC4D-202ENST00000492979 BRIP1Q9BX63 1249 aa24.78■■□□□ 1.56
SSC4D-202ENST00000492979 TSPYL4Q9UJ04 414 aa24.77■■□□□ 1.56
SSC4D-202ENST00000492979 ZNF652Q9Y2D9 606 aa24.77■■□□□ 1.56
SSC4D-202ENST00000492979 BCORQ6W2J9 1755 aa24.77■■□□□ 1.56
SSC4D-202ENST00000492979 ARFGEF1Q9Y6D6 1849 aa24.77■■□□□ 1.56
SSC4D-202ENST00000492979 ERVV-1B6SEH8 477 aa24.76■■□□□ 1.55
SSC4D-202ENST00000492979 DALRD3Q5D0E6 543 aaKnown RBP24.76■■□□□ 1.55
SSC4D-202ENST00000492979 BCS1LQ9Y276 419 aa24.76■■□□□ 1.55
SSC4D-202ENST00000492979 ZNF330Q9Y3S2 320 aaPredicted RBP24.74■■□□□ 1.55
SSC4D-202ENST00000492979 NCBP3Q53F19 620 aaKnown RBP24.73■■□□□ 1.55
SSC4D-202ENST00000492979 PRR5LQ6MZQ0 368 aa24.73■■□□□ 1.55
SSC4D-202ENST00000492979 CCDC146Q8IYE0 955 aa24.73■■□□□ 1.55
SSC4D-202ENST00000492979 CHRNA5P30532 468 aa24.72■■□□□ 1.55
SSC4D-202ENST00000492979 PDE6BP35913 854 aa24.72■■□□□ 1.55
SSC4D-202ENST00000492979 KLRG2A4D1S0 409 aaPredicted RBP24.71■■□□□ 1.55
SSC4D-202ENST00000492979 H0YIN7 160 aa24.71■■□□□ 1.55
SSC4D-202ENST00000492979 HOXB7P09629 217 aa24.71■■□□□ 1.55
SSC4D-202ENST00000492979 PIP4K2AP48426 406 aaPredicted RBP24.71■■□□□ 1.55
SSC4D-202ENST00000492979 BICDL1Q6ZP65 573 aa24.71■■□□□ 1.55
SSC4D-202ENST00000492979 LRP10Q7Z4F1 713 aa24.71■■□□□ 1.55
SSC4D-202ENST00000492979 CFAP44Q96MT7 982 aa24.7■■□□□ 1.54
SSC4D-202ENST00000492979 RRP7AQ9Y3A4 280 aaKnown RBP24.7■■□□□ 1.54
SSC4D-202ENST00000492979 DLEC1Q9Y238 1755 aa24.7■■□□□ 1.54
SSC4D-202ENST00000492979 ZNF853P0CG23 659 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms