RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 COL15A1P39059 1388 aa14□□□□□ -0.17
CDC42SE1-206ENST00000492796 KCNQ3O43525 872 aa14□□□□□ -0.17
CDC42SE1-206ENST00000492796 CCDC184Q52MB2 194 aa14□□□□□ -0.17
CDC42SE1-206ENST00000492796 THUMPD2Q9BTF0 503 aaKnown RBP14□□□□□ -0.17
CDC42SE1-206ENST00000492796 MRS2Q9HD23 443 aa14□□□□□ -0.17
CDC42SE1-206ENST00000492796 BABAM1Q9NWV8 329 aa14□□□□□ -0.17
CDC42SE1-206ENST00000492796 ZBTB1Q9Y2K1 713 aa14□□□□□ -0.17
CDC42SE1-206ENST00000492796 RRP7AQ9Y3A4 280 aaKnown RBP14□□□□□ -0.17
CDC42SE1-206ENST00000492796 USP42Q9H9J4 1324 aaKnown RBP13.99□□□□□ -0.17
CDC42SE1-206ENST00000492796 SNRPA1P09661 255 aaKnown RBP13.99□□□□□ -0.17
CDC42SE1-206ENST00000492796 FHDC1Q9C0D6 1143 aaPredicted RBP13.99□□□□□ -0.17
CDC42SE1-206ENST00000492796 SCN7AQ01118 1682 aa13.98□□□□□ -0.17
CDC42SE1-206ENST00000492796 NEUROD2Q15784 382 aa13.98□□□□□ -0.17
CDC42SE1-206ENST00000492796 NLGN1Q8N2Q7 840 aa13.98□□□□□ -0.17
CDC42SE1-206ENST00000492796 GYS1P13807 737 aa13.97□□□□□ -0.17
CDC42SE1-206ENST00000492796 IL6STP40189 918 aaPredicted RBP13.97□□□□□ -0.17
CDC42SE1-206ENST00000492796 SYT17Q9BSW7 474 aa13.97□□□□□ -0.17
CDC42SE1-206ENST00000492796 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
CDC42SE1-206ENST00000492796 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
CDC42SE1-206ENST00000492796 A0A087WZG4 1122 aa13.96□□□□□ -0.17
CDC42SE1-206ENST00000492796 ZPR1O75312 459 aa13.96□□□□□ -0.17
CDC42SE1-206ENST00000492796 CANXP27824 592 aaKnown RBP13.96□□□□□ -0.17
CDC42SE1-206ENST00000492796 TSPYL4Q9UJ04 414 aa13.96□□□□□ -0.17
CDC42SE1-206ENST00000492796 BCORQ6W2J9 1755 aa13.96□□□□□ -0.18
CDC42SE1-206ENST00000492796 KIF13BQ9NQT8 1826 aa13.95□□□□□ -0.18
CDC42SE1-206ENST00000492796 APAF1O14727 1248 aa13.95□□□□□ -0.18
CDC42SE1-206ENST00000492796 EIF5P55010 431 aaKnown RBP13.95□□□□□ -0.18
CDC42SE1-206ENST00000492796 EIF4A1P60842 406 aaKnown RBP13.95□□□□□ -0.18
CDC42SE1-206ENST00000492796 NARFQ9UHQ1 456 aa13.95□□□□□ -0.18
CDC42SE1-206ENST00000492796 USP16Q9Y5T5 823 aa13.95□□□□□ -0.18
CDC42SE1-206ENST00000492796 PRAMEF22A3QJZ6 481 aa13.94□□□□□ -0.18
CDC42SE1-206ENST00000492796 GIGYF1O75420 1035 aaPredicted RBP13.94□□□□□ -0.18
CDC42SE1-206ENST00000492796 MMP10P09238 476 aa13.94□□□□□ -0.18
CDC42SE1-206ENST00000492796 CALD1Q05682 793 aaKnown RBP13.94□□□□□ -0.18
CDC42SE1-206ENST00000492796 NPM2Q86SE8 214 aaKnown RBP13.94□□□□□ -0.18
CDC42SE1-206ENST00000492796 KLHL34Q8N239 644 aa13.94□□□□□ -0.18
CDC42SE1-206ENST00000492796 SRP68Q9UHB9 627 aaKnown RBP13.94□□□□□ -0.18
CDC42SE1-206ENST00000492796 CD2APQ9Y5K6 639 aa13.94□□□□□ -0.18
CDC42SE1-206ENST00000492796 DCAF8L1A6NGE4 600 aa13.93□□□□□ -0.18
CDC42SE1-206ENST00000492796 A1BGP04217 495 aa13.93□□□□□ -0.18
CDC42SE1-206ENST00000492796 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
CDC42SE1-206ENST00000492796 USPL1Q5W0Q7 1092 aa13.93□□□□□ -0.18
CDC42SE1-206ENST00000492796 C10orf71Q711Q0 1435 aa13.92□□□□□ -0.18
CDC42SE1-206ENST00000492796 CHL1O00533 1208 aa13.92□□□□□ -0.18
CDC42SE1-206ENST00000492796 YY1P25490 414 aa13.92□□□□□ -0.18
CDC42SE1-206ENST00000492796 FKBP8Q14318 412 aa13.92□□□□□ -0.18
CDC42SE1-206ENST00000492796 PARP3Q9Y6F1 533 aa13.92□□□□□ -0.18
CDC42SE1-206ENST00000492796 ERBB4Q15303 1308 aa13.91□□□□□ -0.18
CDC42SE1-206ENST00000492796 NRXN2Q9P2S2 1712 aa13.91□□□□□ -0.18
CDC42SE1-206ENST00000492796 CCDC27Q2M243 656 aa13.91□□□□□ -0.18
CDC42SE1-206ENST00000492796 CFAP44Q96MT7 982 aa13.91□□□□□ -0.18
CDC42SE1-206ENST00000492796 ZNF330Q9Y3S2 320 aaPredicted RBP13.91□□□□□ -0.18
CDC42SE1-206ENST00000492796 BCL2L12Q9HB09 334 aa13.9□□□□□ -0.18
CDC42SE1-206ENST00000492796 IFT57Q9NWB7 429 aa13.9□□□□□ -0.18
CDC42SE1-206ENST00000492796 KIAA1551Q9HCM1 1747 aa13.9□□□□□ -0.18
CDC42SE1-206ENST00000492796 NBPF26B4DH59 902 aa13.89□□□□□ -0.19
CDC42SE1-206ENST00000492796 RGL2O15211 777 aa13.89□□□□□ -0.19
CDC42SE1-206ENST00000492796 ZNF853P0CG23 659 aa13.89□□□□□ -0.19
CDC42SE1-206ENST00000492796 TM4SF1P30408 202 aa13.89□□□□□ -0.19
CDC42SE1-206ENST00000492796 GNAI1P63096 354 aa13.89□□□□□ -0.19
CDC42SE1-206ENST00000492796 NBPF10Q6P3W6 841 aaKnown RBP13.89□□□□□ -0.19
CDC42SE1-206ENST00000492796 DZIP3Q86Y13 1208 aaKnown RBP13.89□□□□□ -0.19
CDC42SE1-206ENST00000492796 NBPF15Q8N660 670 aa13.89□□□□□ -0.19
CDC42SE1-206ENST00000492796 NLGN2Q8NFZ4 835 aa13.89□□□□□ -0.19
CDC42SE1-206ENST00000492796 LAS1LQ9Y4W2 734 aaKnown RBP13.89□□□□□ -0.19
CDC42SE1-206ENST00000492796 AFDNP55196 1824 aaKnown RBP13.89□□□□□ -0.19
CDC42SE1-206ENST00000492796 POLRMTO00411 1230 aaKnown RBP13.88□□□□□ -0.19
CDC42SE1-206ENST00000492796 HOXB7P09629 217 aa13.88□□□□□ -0.19
CDC42SE1-206ENST00000492796 PIP4K2AP48426 406 aaPredicted RBP13.88□□□□□ -0.19
CDC42SE1-206ENST00000492796 DDR1Q08345 913 aa13.88□□□□□ -0.19
CDC42SE1-206ENST00000492796 TBC1D2BQ9UPU7 963 aa13.88□□□□□ -0.19
CDC42SE1-206ENST00000492796 CAMTA2O94983 1202 aa13.87□□□□□ -0.19
CDC42SE1-206ENST00000492796 NFIXQ14938 502 aa13.87□□□□□ -0.19
CDC42SE1-206ENST00000492796 FAM9BQ8IZU0 186 aa13.87□□□□□ -0.19
CDC42SE1-206ENST00000492796 MBIPQ9NS73 344 aa13.87□□□□□ -0.19
CDC42SE1-206ENST00000492796 ZNF652Q9Y2D9 606 aa13.87□□□□□ -0.19
CDC42SE1-206ENST00000492796 CARMIL3Q8ND23 1372 aa13.86□□□□□ -0.19
CDC42SE1-206ENST00000492796 CCER2I3L3R5 266 aa13.86□□□□□ -0.19
CDC42SE1-206ENST00000492796 TGFB2P61812 414 aa13.86□□□□□ -0.19
CDC42SE1-206ENST00000492796 CLEC4GQ6UXB4 293 aa13.86□□□□□ -0.19
CDC42SE1-206ENST00000492796 WWC1Q8IX03 1113 aa13.86□□□□□ -0.19
CDC42SE1-206ENST00000492796 NGEFQ8N5V2 710 aa13.86□□□□□ -0.19
CDC42SE1-206ENST00000492796 IL16Q14005 1332 aa13.86□□□□□ -0.19
CDC42SE1-206ENST00000492796 PXDNLA1KZ92 1463 aa13.86□□□□□ -0.19
CDC42SE1-206ENST00000492796 N4BP2Q86UW6 1770 aaPredicted RBP13.86□□□□□ -0.19
CDC42SE1-206ENST00000492796 BRCA1P38398 1863 aaKnown RBP13.84□□□□□ -0.19
CDC42SE1-206ENST00000492796 SERPINB2P05120 415 aa13.84□□□□□ -0.19
CDC42SE1-206ENST00000492796 MYL6BP14649 208 aa13.84□□□□□ -0.19
CDC42SE1-206ENST00000492796 EIF2S2P20042 333 aaKnown RBP13.84□□□□□ -0.19
CDC42SE1-206ENST00000492796 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
CDC42SE1-206ENST00000492796 KIF6Q6ZMV9 814 aa13.84□□□□□ -0.19
CDC42SE1-206ENST00000492796 DLEC1Q9Y238 1755 aa13.83□□□□□ -0.19
CDC42SE1-206ENST00000492796 NUP98P52948 1817 aa13.83□□□□□ -0.2
CDC42SE1-206ENST00000492796 ERVV-1B6SEH8 477 aa13.83□□□□□ -0.2
CDC42SE1-206ENST00000492796 PDIA6Q15084 440 aa13.83□□□□□ -0.2
CDC42SE1-206ENST00000492796 GPR162Q16538 588 aa13.83□□□□□ -0.2
CDC42SE1-206ENST00000492796 KRT24Q2M2I5 525 aa13.83□□□□□ -0.2
CDC42SE1-206ENST00000492796 BICDL1Q6ZP65 573 aa13.83□□□□□ -0.2
CDC42SE1-206ENST00000492796 SETDB2Q96T68 719 aa13.83□□□□□ -0.2
CDC42SE1-206ENST00000492796 HDGFL1Q5TGJ6 251 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms