RNA–Protein interactions for RNA: ENST00000492595.5

SEC22A-210, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 972 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-210ENST00000492595 PCNTO95613 3336 aa12.78□□□□□ -0.36
SEC22A-210ENST00000492595 KCPQ6ZWJ8 1503 aa12.78□□□□□ -0.36
SEC22A-210ENST00000492595 DALRD3Q5D0E6 543 aaKnown RBP12.78□□□□□ -0.36
SEC22A-210ENST00000492595 TRAPPC3LQ5T215 181 aa12.78□□□□□ -0.36
SEC22A-210ENST00000492595 PIGBQ92521 554 aa12.78□□□□□ -0.36
SEC22A-210ENST00000492595 PARP3Q9Y6F1 533 aa12.78□□□□□ -0.36
SEC22A-210ENST00000492595 SMG6Q86US8 1419 aaKnown RBP12.78□□□□□ -0.36
SEC22A-210ENST00000492595 MON2Q7Z3U7 1717 aa12.77□□□□□ -0.36
SEC22A-210ENST00000492595 VEGFAP15692 232 aaPredicted RBP12.77□□□□□ -0.37
SEC22A-210ENST00000492595 ATP6V1AP38606 617 aa12.77□□□□□ -0.37
SEC22A-210ENST00000492595 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.37
SEC22A-210ENST00000492595 USHBP1Q8N6Y0 703 aa12.77□□□□□ -0.37
SEC22A-210ENST00000492595 RTCBQ9Y3I0 505 aaKnown RBP12.77□□□□□ -0.37
SEC22A-210ENST00000492595 CD163L1Q9NR16 1453 aa12.77□□□□□ -0.37
SEC22A-210ENST00000492595 POTEJP0CG39 1038 aa12.76□□□□□ -0.37
SEC22A-210ENST00000492595 EFCAB3Q8N7B9 438 aa12.76□□□□□ -0.37
SEC22A-210ENST00000492595 DCAF5Q96JK2 942 aa12.76□□□□□ -0.37
SEC22A-210ENST00000492595 OCEL1Q9H607 264 aa12.76□□□□□ -0.37
SEC22A-210ENST00000492595 ZC3H4Q9UPT8 1303 aaKnown RBP12.76□□□□□ -0.37
SEC22A-210ENST00000492595 RTL1A6NKG5 1358 aa12.76□□□□□ -0.37
SEC22A-210ENST00000492595 STK25O00506 426 aa12.75□□□□□ -0.37
SEC22A-210ENST00000492595 CYP27B1O15528 508 aa12.75□□□□□ -0.37
SEC22A-210ENST00000492595 GOLGA2Q08379 1002 aa12.75□□□□□ -0.37
SEC22A-210ENST00000492595 PDCD7Q8N8D1 485 aaKnown RBP12.75□□□□□ -0.37
SEC22A-210ENST00000492595 L3MBTL2Q969R5 705 aa12.75□□□□□ -0.37
SEC22A-210ENST00000492595 A0A1W2PP64 1363 aa12.74□□□□□ -0.37
SEC22A-210ENST00000492595 SEC24BO95487 1268 aa12.74□□□□□ -0.37
SEC22A-210ENST00000492595 KCNA3P22001 575 aa12.74□□□□□ -0.37
SEC22A-210ENST00000492595 RFC4P35249 363 aa12.74□□□□□ -0.37
SEC22A-210ENST00000492595 PRDM10Q9NQV6 1147 aa12.74□□□□□ -0.37
SEC22A-210ENST00000492595 TMOD3Q9NYL9 352 aa12.74□□□□□ -0.37
SEC22A-210ENST00000492595 ITPK1Q13572 414 aa12.73□□□□□ -0.37
SEC22A-210ENST00000492595 HS6ST3Q8IZP7 471 aa12.73□□□□□ -0.37
SEC22A-210ENST00000492595 PUS7Q96PZ0 661 aaKnown RBP12.73□□□□□ -0.37
SEC22A-210ENST00000492595 TAF1LQ8IZX4 1826 aa12.72□□□□□ -0.37
SEC22A-210ENST00000492595 GLTPD2A6NH11 291 aa12.72□□□□□ -0.37
SEC22A-210ENST00000492595 FBLN1P23142 703 aa12.72□□□□□ -0.37
SEC22A-210ENST00000492595 NKX1-1Q15270 411 aaPredicted RBP12.72□□□□□ -0.37
SEC22A-210ENST00000492595 AIDAQ96BJ3 306 aa12.72□□□□□ -0.37
SEC22A-210ENST00000492595 SPG7Q9UQ90 795 aa12.72□□□□□ -0.37
SEC22A-210ENST00000492595 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
SEC22A-210ENST00000492595 TOGARAM1Q9Y4F4 1720 aa12.71□□□□□ -0.37
SEC22A-210ENST00000492595 GYS1P13807 737 aa12.71□□□□□ -0.37
SEC22A-210ENST00000492595 PLCG2P16885 1265 aa12.71□□□□□ -0.37
SEC22A-210ENST00000492595 RRS1Q15050 365 aaKnown RBP12.71□□□□□ -0.37
SEC22A-210ENST00000492595 ARHGEF1Q92888 912 aaKnown RBP12.71□□□□□ -0.37
SEC22A-210ENST00000492595 ASAP1Q9ULH1 1129 aa12.71□□□□□ -0.37
SEC22A-210ENST00000492595 UBR3Q6ZT12 1888 aa12.71□□□□□ -0.37
SEC22A-210ENST00000492595 LMNB1P20700 586 aa12.7□□□□□ -0.38
SEC22A-210ENST00000492595 CTCFP49711 727 aaPredicted RBP12.7□□□□□ -0.38
SEC22A-210ENST00000492595 RC3H1Q5TC82 1133 aaKnown RBP12.7□□□□□ -0.38
SEC22A-210ENST00000492595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.7□□□□□ -0.383e-9■■■■□ 19.5
SEC22A-210ENST00000492595 KIF13BQ9NQT8 1826 aa12.69□□□□□ -0.38
SEC22A-210ENST00000492595 FOXN1O15353 648 aa12.69□□□□□ -0.38
SEC22A-210ENST00000492595 FAM161AQ3B820 660 aa12.69□□□□□ -0.38
SEC22A-210ENST00000492595 MKRN1Q9UHC7 482 aaKnown RBP12.69□□□□□ -0.38
SEC22A-210ENST00000492595 TNRC6CQ9HCJ0 1690 aaKnown RBP12.69□□□□□ -0.38
SEC22A-210ENST00000492595 N4BP2Q86UW6 1770 aaPredicted RBP12.69□□□□□ -0.38
SEC22A-210ENST00000492595 INSRP06213 1382 aa12.69□□□□□ -0.38
SEC22A-210ENST00000492595 DPY19L2Q6NUT2 758 aa12.68□□□□□ -0.38
SEC22A-210ENST00000492595 RPS6KA4O75676 772 aa12.67□□□□□ -0.38
SEC22A-210ENST00000492595 HSP90AB2PQ58FF8 381 aa12.67□□□□□ -0.38
SEC22A-210ENST00000492595 CARD11Q9BXL7 1154 aa12.67□□□□□ -0.38
SEC22A-210ENST00000492595 ATG3Q9NT62 314 aa12.67□□□□□ -0.38
SEC22A-210ENST00000492595 CNTNAP4Q9C0A0 1308 aa12.66□□□□□ -0.38
SEC22A-210ENST00000492595 KIAA1551Q9HCM1 1747 aa12.66□□□□□ -0.38
SEC22A-210ENST00000492595 CHRNA5P30532 468 aa12.66□□□□□ -0.38
SEC22A-210ENST00000492595 FLT4P35916 1363 aa12.66□□□□□ -0.38
SEC22A-210ENST00000492595 KIF24Q5T7B8 1368 aa12.66□□□□□ -0.38
SEC22A-210ENST00000492595 SLC24A1O60721 1099 aa12.65□□□□□ -0.38
SEC22A-210ENST00000492595 RASSF7Q02833 373 aa12.65□□□□□ -0.38
SEC22A-210ENST00000492595 MLLT1Q03111 559 aaPredicted RBP12.65□□□□□ -0.38
SEC22A-210ENST00000492595 IFNL2Q8IZJ0 200 aa12.65□□□□□ -0.38
SEC22A-210ENST00000492595 C4AP0C0L4 1744 aa12.65□□□□□ -0.38
SEC22A-210ENST00000492595 PKD1L3Q7Z443 1732 aa12.65□□□□□ -0.38
SEC22A-210ENST00000492595 FBXO22Q8NEZ5 403 aa12.64□□□□□ -0.39
SEC22A-210ENST00000492595 OTUD5Q96G74 571 aa12.64□□□□□ -0.39
SEC22A-210ENST00000492595 ABHD8Q96I13 439 aa12.64□□□□□ -0.39
SEC22A-210ENST00000492595 MS4A4AQ96JQ5 239 aa12.64□□□□□ -0.39
SEC22A-210ENST00000492595 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
SEC22A-210ENST00000492595 KDM6AO15550 1401 aaPredicted RBP12.63□□□□□ -0.39
SEC22A-210ENST00000492595 FYB1O15117 783 aa12.63□□□□□ -0.39
SEC22A-210ENST00000492595 GGNBP2Q9H3C7 697 aa12.63□□□□□ -0.39
SEC22A-210ENST00000492595 CNTNAP1P78357 1384 aa12.63□□□□□ -0.39
SEC22A-210ENST00000492595 RGPD2P0DJD1 1756 aa12.63□□□□□ -0.39
SEC22A-210ENST00000492595 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
SEC22A-210ENST00000492595 PHKG2P15735 406 aa12.62□□□□□ -0.39
SEC22A-210ENST00000492595 LBX1P52954 281 aa12.62□□□□□ -0.39
SEC22A-210ENST00000492595 TTLL6Q8N841 843 aa12.62□□□□□ -0.39
SEC22A-210ENST00000492595 MAP2P11137 1827 aaKnown RBP12.62□□□□□ -0.39
SEC22A-210ENST00000492595 KDRP35968 1356 aa12.61□□□□□ -0.39
SEC22A-210ENST00000492595 POTECB2RU33 542 aa12.61□□□□□ -0.39
SEC22A-210ENST00000492595 ERVV-2B6SEH9 535 aa12.61□□□□□ -0.39
SEC22A-210ENST00000492595 DDR1Q08345 913 aa12.61□□□□□ -0.39
SEC22A-210ENST00000492595 WBP1LQ9NX94 342 aa12.61□□□□□ -0.39
SEC22A-210ENST00000492595 USP42Q9H9J4 1324 aaKnown RBP12.61□□□□□ -0.39
SEC22A-210ENST00000492595 POLRMTO00411 1230 aaKnown RBP12.6□□□□□ -0.39
SEC22A-210ENST00000492595 HSP90AB1P08238 724 aaKnown RBP12.6□□□□□ -0.39
SEC22A-210ENST00000492595 NEUROD1Q13562 356 aa12.6□□□□□ -0.39
SEC22A-210ENST00000492595 SLC4A9Q96Q91 983 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms