RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 DNAJC2Q99543 621 aaKnown RBP18.32■□□□□ 0.52
TNFRSF1B-203ENST00000492361 FSD1Q9BTV5 496 aa18.32■□□□□ 0.52
TNFRSF1B-203ENST00000492361 USP25Q9UHP3 1055 aa18.32■□□□□ 0.52
TNFRSF1B-203ENST00000492361 MYO5BQ9ULV0 1848 aa18.32■□□□□ 0.52
TNFRSF1B-203ENST00000492361 PHF8Q9UPP1 1060 aa18.32■□□□□ 0.52
TNFRSF1B-203ENST00000492361 USP48Q86UV5 1035 aa18.32■□□□□ 0.52
TNFRSF1B-203ENST00000492361 EDC3Q96F86 508 aaKnown RBP18.32■□□□□ 0.52
TNFRSF1B-203ENST00000492361 MAP2P11137 1827 aaKnown RBP18.32■□□□□ 0.52
TNFRSF1B-203ENST00000492361 ZSCAN30Q86W11 494 aa18.31■□□□□ 0.52
TNFRSF1B-203ENST00000492361 PROSER3Q2NL68 480 aa18.31■□□□□ 0.52
TNFRSF1B-203ENST00000492361 DRC7Q8IY82 874 aa18.31■□□□□ 0.52
TNFRSF1B-203ENST00000492361 C17orf53Q8N3J3 647 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF1B-203ENST00000492361 DDX17Q92841 729 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1B-203ENST00000492361 FLT4P35916 1363 aa18.31■□□□□ 0.52
TNFRSF1B-203ENST00000492361 ARHGAP31Q2M1Z3 1444 aa18.31■□□□□ 0.52
TNFRSF1B-203ENST00000492361 THEMISQ8N1K5 641 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF1B-203ENST00000492361 TFIP11Q9UBB9 837 aaKnown RBP18.3■□□□□ 0.52
TNFRSF1B-203ENST00000492361 FAM177BA6PVY3 158 aa18.3■□□□□ 0.52
TNFRSF1B-203ENST00000492361 DDIT3P35638 169 aa18.3■□□□□ 0.52
TNFRSF1B-203ENST00000492361 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
TNFRSF1B-203ENST00000492361 ATP5J2-PTCD1G3V325 749 aa18.3■□□□□ 0.52
TNFRSF1B-203ENST00000492361 PTCD1O75127 700 aaKnown RBP18.3■□□□□ 0.52
TNFRSF1B-203ENST00000492361 TSPY26PQ9H489 355 aa18.3■□□□□ 0.52
TNFRSF1B-203ENST00000492361 HCLS1P14317 486 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1B-203ENST00000492361 AK2P54819 239 aa18.29■□□□□ 0.52
TNFRSF1B-203ENST00000492361 GIMAP6Q6P9H5 292 aa18.29■□□□□ 0.52
TNFRSF1B-203ENST00000492361 SYAP1Q96A49 352 aaPredicted RBP18.29■□□□□ 0.52
TNFRSF1B-203ENST00000492361 KIF1BPQ96EK5 621 aa18.29■□□□□ 0.52
TNFRSF1B-203ENST00000492361 NEUROD6Q96NK8 337 aa18.29■□□□□ 0.52
TNFRSF1B-203ENST00000492361 ORAI2Q96SN7 254 aa18.29■□□□□ 0.52
TNFRSF1B-203ENST00000492361 TMEM2Q9UHN6 1383 aa18.29■□□□□ 0.52
TNFRSF1B-203ENST00000492361 PLEKHG3A1L390 1219 aa18.29■□□□□ 0.52
TNFRSF1B-203ENST00000492361 LRRC2Q9BYS8 371 aa18.29■□□□□ 0.52
TNFRSF1B-203ENST00000492361 CABLES1Q8TDN4 633 aa18.29■□□□□ 0.52
TNFRSF1B-203ENST00000492361 GLIPR1L2Q4G1C9 344 aa18.28■□□□□ 0.52
TNFRSF1B-203ENST00000492361 DDX11Q96FC9 970 aa18.28■□□□□ 0.52
TNFRSF1B-203ENST00000492361 GPATCH3Q96I76 525 aa18.28■□□□□ 0.52
TNFRSF1B-203ENST00000492361 CPSF1Q10570 1443 aaKnown RBP18.28■□□□□ 0.52
TNFRSF1B-203ENST00000492361 ATP7BP35670 1465 aa18.27■□□□□ 0.52
TNFRSF1B-203ENST00000492361 ZKSCAN1P17029 563 aaPredicted RBP18.27■□□□□ 0.52
TNFRSF1B-203ENST00000492361 CHRNA2Q15822 529 aa18.27■□□□□ 0.52
TNFRSF1B-203ENST00000492361 PDRG1Q9NUG6 133 aa18.27■□□□□ 0.52
TNFRSF1B-203ENST00000492361 AATKQ6ZMQ8 1374 aa18.27■□□□□ 0.51
TNFRSF1B-203ENST00000492361 FAM227BQ96M60 508 aa18.26■□□□□ 0.51
TNFRSF1B-203ENST00000492361 MED14O60244 1454 aa18.26■□□□□ 0.51
TNFRSF1B-203ENST00000492361 PLEKHO1Q53GL0 409 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1B-203ENST00000492361 ATP10DQ9P241 1426 aa18.26■□□□□ 0.51
TNFRSF1B-203ENST00000492361 DNM1Q05193 864 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1B-203ENST00000492361 ADGRB2O60241 1585 aa18.25■□□□□ 0.51
TNFRSF1B-203ENST00000492361 PTH1RQ03431 593 aa18.25■□□□□ 0.51
TNFRSF1B-203ENST00000492361 TSC1Q92574 1164 aa18.25■□□□□ 0.51
TNFRSF1B-203ENST00000492361 TTC12Q9H892 705 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1B-203ENST00000492361 CDK12Q9NYV4 1490 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1B-203ENST00000492361 WDR33Q9C0J8 1336 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1B-203ENST00000492361 MBD3O95983 291 aa18.24■□□□□ 0.51
TNFRSF1B-203ENST00000492361 CKAP2LQ8IYA6 745 aa18.24■□□□□ 0.51
TNFRSF1B-203ENST00000492361 GJB2P29033 226 aa18.24■□□□□ 0.51
TNFRSF1B-203ENST00000492361 ADCK5Q3MIX3 580 aa18.24■□□□□ 0.51
TNFRSF1B-203ENST00000492361 MYD88Q99836 296 aa18.24■□□□□ 0.51
TNFRSF1B-203ENST00000492361 RAB11FIP3O75154 756 aa18.24■□□□□ 0.51
TNFRSF1B-203ENST00000492361 KIAA2012Q0VF49 1180 aa18.24■□□□□ 0.51
TNFRSF1B-203ENST00000492361 IFT172Q9UG01 1749 aa18.23■□□□□ 0.51
TNFRSF1B-203ENST00000492361 USP6P35125 1406 aa18.23■□□□□ 0.51
TNFRSF1B-203ENST00000492361 LARP1BQ659C4 914 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1B-203ENST00000492361 LRSAM1Q6UWE0 723 aa18.23■□□□□ 0.51
TNFRSF1B-203ENST00000492361 RUFY2Q8WXA3 655 aa18.23■□□□□ 0.51
TNFRSF1B-203ENST00000492361 RAPGEF4Q8WZA2 1011 aa18.23■□□□□ 0.51
TNFRSF1B-203ENST00000492361 SNX14Q9Y5W7 946 aa18.23■□□□□ 0.51
TNFRSF1B-203ENST00000492361 CYP46A1Q9Y6A2 500 aa18.23■□□□□ 0.51
TNFRSF1B-203ENST00000492361 LARGE1O95461 756 aa18.23■□□□□ 0.51
TNFRSF1B-203ENST00000492361 MCM2P49736 904 aa18.23■□□□□ 0.51
TNFRSF1B-203ENST00000492361 ISY1Q9ULR0 285 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1B-203ENST00000492361 NEXNQ0ZGT2 675 aa18.22■□□□□ 0.51
TNFRSF1B-203ENST00000492361 MAP3K5Q99683 1374 aa18.22■□□□□ 0.51
TNFRSF1B-203ENST00000492361 STX6O43752 255 aa18.22■□□□□ 0.51
TNFRSF1B-203ENST00000492361 SYT1P21579 422 aa18.22■□□□□ 0.51
TNFRSF1B-203ENST00000492361 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
TNFRSF1B-203ENST00000492361 SBNO1A3KN83 1393 aa18.22■□□□□ 0.51
TNFRSF1B-203ENST00000492361 KIAA0232Q92628 1395 aa18.22■□□□□ 0.51
TNFRSF1B-203ENST00000492361 CHGBP05060 677 aa18.21■□□□□ 0.51
TNFRSF1B-203ENST00000492361 RAB11FIP4Q86YS3 637 aa18.21■□□□□ 0.51
TNFRSF1B-203ENST00000492361 BICD2Q8TD16 824 aa18.21■□□□□ 0.51
TNFRSF1B-203ENST00000492361 TLR7Q9NYK1 1049 aaKnown RBP18.21■□□□□ 0.51
TNFRSF1B-203ENST00000492361 LIMCH1Q9UPQ0 1083 aa18.21■□□□□ 0.51
TNFRSF1B-203ENST00000492361 GUCY1B3Q02153 619 aa18.21■□□□□ 0.51
TNFRSF1B-203ENST00000492361 TMEM131LA2VDJ0 1609 aa18.21■□□□□ 0.5
TNFRSF1B-203ENST00000492361 GLRX3O76003 335 aaKnown RBP18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 EIF4A1P60842 406 aaKnown RBP18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 ANKRD24Q8TF21 1146 aa18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 UQCRHLA0A096LP55 91 aa18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 UQCRHP07919 91 aa18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 TTC5Q8N0Z6 440 aa18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 ECHDC1Q9NTX5 307 aa18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 DBF4Q9UBU7 674 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 H3BQV1 296 aa18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 IFFO2Q5TF58 517 aa18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 CCDC129Q6ZRS4 1044 aa18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 NFATC2IPQ8NCF5 419 aa18.2■□□□□ 0.5
TNFRSF1B-203ENST00000492361 BICC1Q9H694 974 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms