RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 SLC27A3Q5K4L6 730 aa7.46□□□□□ -1.22
RTN4-215ENST00000491592 SLC9A9Q8IVB4 645 aa7.46□□□□□ -1.22
RTN4-215ENST00000491592 NANOS1Q8WY41 292 aaKnown RBP7.46□□□□□ -1.22
RTN4-215ENST00000491592 CNTNAP3BQ96NU0 1288 aa7.46□□□□□ -1.22
RTN4-215ENST00000491592 ZSCAN10Q96SZ4 725 aaPredicted RBP7.46□□□□□ -1.22
RTN4-215ENST00000491592 CNTNAP3Q9BZ76 1288 aa7.46□□□□□ -1.22
RTN4-215ENST00000491592 IQSEC3Q9UPP2 1182 aaPredicted RBP7.46□□□□□ -1.22
RTN4-215ENST00000491592 FIGNL2A6NMB9 653 aa7.45□□□□□ -1.22
RTN4-215ENST00000491592 ATP2B4P23634 1241 aa7.45□□□□□ -1.22
RTN4-215ENST00000491592 OCLNQ16625 522 aa7.45□□□□□ -1.22
RTN4-215ENST00000491592 TBCELQ5QJ74 424 aa7.45□□□□□ -1.22
RTN4-215ENST00000491592 B4GALNT3Q6L9W6 998 aa7.45□□□□□ -1.22
RTN4-215ENST00000491592 TMEM151AQ8N4L1 468 aa7.45□□□□□ -1.22
RTN4-215ENST00000491592 IGFBP4P22692 258 aa7.44□□□□□ -1.22
RTN4-215ENST00000491592 GTF2E1P29083 439 aaPredicted RBP7.44□□□□□ -1.22
RTN4-215ENST00000491592 WEE1P30291 646 aa7.44□□□□□ -1.22
RTN4-215ENST00000491592 CCDC155Q8N6L0 562 aa7.44□□□□□ -1.22
RTN4-215ENST00000491592 GPR161Q8N6U8 529 aaKnown RBP7.44□□□□□ -1.22
RTN4-215ENST00000491592 RHBDD1Q8TEB9 315 aa7.44□□□□□ -1.22
RTN4-215ENST00000491592 SCG3Q8WXD2 468 aaKnown RBP7.44□□□□□ -1.22
RTN4-215ENST00000491592 PRIMPOLQ96LW4 560 aa7.44□□□□□ -1.22
RTN4-215ENST00000491592 CXXC1Q9P0U4 656 aaPredicted RBP7.44□□□□□ -1.22
RTN4-215ENST00000491592 LOC100996750A0A140TA64 210 aa7.43□□□□□ -1.22
RTN4-215ENST00000491592 CDK2AP1O14519 115 aa7.43□□□□□ -1.22
RTN4-215ENST00000491592 C21orf2O43822 256 aa7.43□□□□□ -1.22
RTN4-215ENST00000491592 PSMA6P60900 246 aaKnown RBP7.43□□□□□ -1.22
RTN4-215ENST00000491592 KRT76Q01546 638 aa7.43□□□□□ -1.22
RTN4-215ENST00000491592 GNASQ5JWF2 1037 aa7.43□□□□□ -1.22
RTN4-215ENST00000491592 TMEM214Q6NUQ4 689 aaKnown RBP7.43□□□□□ -1.22
RTN4-215ENST00000491592 PPARGC1BQ86YN6 1023 aaKnown RBP7.43□□□□□ -1.22
RTN4-215ENST00000491592 ZNF295-AS1Q8N0V1 137 aa7.43□□□□□ -1.22
RTN4-215ENST00000491592 KCTD17Q8N5Z5 321 aa7.43□□□□□ -1.22
RTN4-215ENST00000491592 COL25A1Q9BXS0 654 aaPredicted RBP7.43□□□□□ -1.22
RTN4-215ENST00000491592 KRTAP4-6Q9BYQ5 205 aa7.43□□□□□ -1.22
RTN4-215ENST00000491592 GRIP2Q9C0E4 1043 aa7.43□□□□□ -1.22
RTN4-215ENST00000491592 ADAMTS8Q9UP79 889 aa7.43□□□□□ -1.22
RTN4-215ENST00000491592 CCDC9Q9Y3X0 531 aaKnown RBP7.43□□□□□ -1.22
RTN4-215ENST00000491592 SLC35F4A4IF30 521 aa7.42□□□□□ -1.22
RTN4-215ENST00000491592 FOXO3O43524 673 aa7.42□□□□□ -1.22
RTN4-215ENST00000491592 PPP1R12BO60237 982 aaPredicted RBP7.42□□□□□ -1.22
RTN4-215ENST00000491592 GDF11O95390 407 aa7.42□□□□□ -1.22
RTN4-215ENST00000491592 SSFA2P28290 1259 aa7.42□□□□□ -1.22
RTN4-215ENST00000491592 PLA2G4AP47712 749 aa7.42□□□□□ -1.22
RTN4-215ENST00000491592 FKBP5Q13451 457 aaPredicted RBP7.42□□□□□ -1.22
RTN4-215ENST00000491592 LYSMD3Q7Z3D4 306 aa7.42□□□□□ -1.22
RTN4-215ENST00000491592 SPATA31C2B4DYI2 1134 aa7.41□□□□□ -1.22
RTN4-215ENST00000491592 BRD1O95696 1058 aa7.41□□□□□ -1.22
RTN4-215ENST00000491592 GSK3AP49840 483 aa7.41□□□□□ -1.22
RTN4-215ENST00000491592 RASSF7Q02833 373 aa7.41□□□□□ -1.22
RTN4-215ENST00000491592 SUZ12Q15022 739 aaKnown RBP7.41□□□□□ -1.22
RTN4-215ENST00000491592 SV2AQ7L0J3 742 aa7.41□□□□□ -1.22
RTN4-215ENST00000491592 GAS2L2Q8NHY3 880 aa7.41□□□□□ -1.22
RTN4-215ENST00000491592 ZDHHC1Q8WTX9 485 aa7.41□□□□□ -1.22
RTN4-215ENST00000491592 C4orf17Q53FE4 359 aa7.4□□□□□ -1.22
RTN4-215ENST00000491592 PHLDB3Q6NSJ2 640 aa7.4□□□□□ -1.22
RTN4-215ENST00000491592 NBPF10Q6P3W6 841 aaKnown RBP7.4□□□□□ -1.22
RTN4-215ENST00000491592 TAS1R3Q7RTX0 852 aa7.4□□□□□ -1.22
RTN4-215ENST00000491592 PRICKLE2Q7Z3G6 844 aa7.4□□□□□ -1.22
RTN4-215ENST00000491592 SVOPQ8N4V2 548 aa7.4□□□□□ -1.22
RTN4-215ENST00000491592 C1orf216Q8TAB5 229 aa7.4□□□□□ -1.22
RTN4-215ENST00000491592 CHMP7Q8WUX9 453 aaPredicted RBP7.4□□□□□ -1.22
RTN4-215ENST00000491592 MKNK1Q9BUB5 465 aa7.4□□□□□ -1.22
RTN4-215ENST00000491592 NIFKQ9BYG3 293 aaKnown RBP7.4□□□□□ -1.22
RTN4-215ENST00000491592 CABP1Q9NZU7 370 aa7.4□□□□□ -1.22
RTN4-215ENST00000491592 CHMP3Q9Y3E7 222 aa7.4□□□□□ -1.22
RTN4-215ENST00000491592 ATAD2Q6PL18 1390 aa7.4□□□□□ -1.22
RTN4-215ENST00000491592 EML1O00423 815 aa7.39□□□□□ -1.23
RTN4-215ENST00000491592 HMGB1P09429 215 aaKnown RBP7.39□□□□□ -1.23
RTN4-215ENST00000491592 ITGA6P23229 1130 aa7.39□□□□□ -1.23
RTN4-215ENST00000491592 TEAD4Q15561 434 aa7.39□□□□□ -1.23
RTN4-215ENST00000491592 SH3PXD2AQ5TCZ1 1133 aa7.39□□□□□ -1.23
RTN4-215ENST00000491592 POTEAQ6S8J7 498 aa7.39□□□□□ -1.23
RTN4-215ENST00000491592 STAG2Q8N3U4 1231 aa7.39□□□□□ -1.23
RTN4-215ENST00000491592 SERTM1A2A2V5 107 aa7.38□□□□□ -1.23
RTN4-215ENST00000491592 SLURP2P0DP57 97 aa7.38□□□□□ -1.23
RTN4-215ENST00000491592 RHOQP17081 205 aa7.38□□□□□ -1.23
RTN4-215ENST00000491592 HIRAP54198 1017 aaPredicted RBP7.38□□□□□ -1.23
RTN4-215ENST00000491592 POU4F2Q12837 409 aa7.38□□□□□ -1.23
RTN4-215ENST00000491592 ZNF385CQ66K41 422 aaPredicted RBP7.38□□□□□ -1.23
RTN4-215ENST00000491592 VWA5B2Q8N398 1253 aa7.38□□□□□ -1.23
RTN4-215ENST00000491592 VTI1AQ96AJ9 217 aa7.38□□□□□ -1.23
RTN4-215ENST00000491592 C2orf49Q9BVC5 232 aaPredicted RBP7.38□□□□□ -1.23
RTN4-215ENST00000491592 ZNF232Q9UNY5 417 aa7.38□□□□□ -1.23
RTN4-215ENST00000491592 PARP3Q9Y6F1 533 aa7.38□□□□□ -1.23
RTN4-215ENST00000491592 CDC14CA4D256 554 aa7.37□□□□□ -1.23
RTN4-215ENST00000491592 NOS2P35228 1153 aa7.37□□□□□ -1.23
RTN4-215ENST00000491592 SCNN1AP37088 669 aa7.37□□□□□ -1.23
RTN4-215ENST00000491592 PHKA2P46019 1235 aa7.37□□□□□ -1.23
RTN4-215ENST00000491592 KCNA1Q09470 495 aa7.37□□□□□ -1.23
RTN4-215ENST00000491592 L3MBTL2Q969R5 705 aa7.37□□□□□ -1.23
RTN4-215ENST00000491592 NBPF1Q3BBV0 1214 aa7.36□□□□□ -1.23
RTN4-215ENST00000491592 WDR44Q5JSH3 913 aa7.36□□□□□ -1.23
RTN4-215ENST00000491592 RNFT1Q5M7Z0 435 aa7.36□□□□□ -1.23
RTN4-215ENST00000491592 AEBP1Q8IUX7 1158 aa7.36□□□□□ -1.23
RTN4-215ENST00000491592 COL26A1Q96A83 441 aa7.36□□□□□ -1.23
RTN4-215ENST00000491592 PTCD1O75127 700 aaKnown RBP7.35□□□□□ -1.23
RTN4-215ENST00000491592 ATP4AP20648 1035 aa7.35□□□□□ -1.23
RTN4-215ENST00000491592 TXLNAP40222 546 aa7.35□□□□□ -1.23
RTN4-215ENST00000491592 MARSP56192 900 aaKnown RBP7.35□□□□□ -1.23
RTN4-215ENST00000491592 CAPN12Q6ZSI9 719 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms