RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 KDM3BQ7LBC6 1761 aa21.1■□□□□ 0.97
PFDN6-207ENST00000491382 TMPOP42166 694 aaKnown RBP21.1■□□□□ 0.97
PFDN6-207ENST00000491382 NLGN1Q8N2Q7 840 aa21.09■□□□□ 0.97
PFDN6-207ENST00000491382 SOS1Q07889 1333 aaPredicted RBP21.08■□□□□ 0.97
PFDN6-207ENST00000491382 KCNQ3O43525 872 aa21.08■□□□□ 0.97
PFDN6-207ENST00000491382 ZBTB1Q9Y2K1 713 aa21.08■□□□□ 0.97
PFDN6-207ENST00000491382 COL15A1P39059 1388 aa21.08■□□□□ 0.96
PFDN6-207ENST00000491382 USP42Q9H9J4 1324 aaKnown RBP21.06■□□□□ 0.96
PFDN6-207ENST00000491382 LAMB4A4D0S4 1761 aa21.06■□□□□ 0.96
PFDN6-207ENST00000491382 SNRPA1P09661 255 aaKnown RBP21.06■□□□□ 0.96
PFDN6-207ENST00000491382 GYS1P13807 737 aa21.06■□□□□ 0.96
PFDN6-207ENST00000491382 CANXP27824 592 aaKnown RBP21.06■□□□□ 0.96
PFDN6-207ENST00000491382 THUMPD2Q9BTF0 503 aaKnown RBP21.06■□□□□ 0.96
PFDN6-207ENST00000491382 ZPR1O75312 459 aa21.05■□□□□ 0.96
PFDN6-207ENST00000491382 NEUROD2Q15784 382 aa21.05■□□□□ 0.96
PFDN6-207ENST00000491382 RRP7AQ9Y3A4 280 aaKnown RBP21.05■□□□□ 0.96
PFDN6-207ENST00000491382 MMP10P09238 476 aa21.04■□□□□ 0.96
PFDN6-207ENST00000491382 NPM2Q86SE8 214 aaKnown RBP21.04■□□□□ 0.96
PFDN6-207ENST00000491382 MIS18AQ9NYP9 233 aa21.04■□□□□ 0.96
PFDN6-207ENST00000491382 A0A087WZG4 1122 aa21.03■□□□□ 0.96
PFDN6-207ENST00000491382 SRP68Q9UHB9 627 aaKnown RBP21.03■□□□□ 0.96
PFDN6-207ENST00000491382 CD2APQ9Y5K6 639 aa21.03■□□□□ 0.96
PFDN6-207ENST00000491382 IL6STP40189 918 aaPredicted RBP21.02■□□□□ 0.96
PFDN6-207ENST00000491382 MRS2Q9HD23 443 aa21.02■□□□□ 0.96
PFDN6-207ENST00000491382 NARFQ9UHQ1 456 aa21.02■□□□□ 0.96
PFDN6-207ENST00000491382 EIF5P55010 431 aaKnown RBP21.01■□□□□ 0.95
PFDN6-207ENST00000491382 BABAM1Q9NWV8 329 aa21.01■□□□□ 0.95
PFDN6-207ENST00000491382 TSPYL4Q9UJ04 414 aa21.01■□□□□ 0.95
PFDN6-207ENST00000491382 ZNF330Q9Y3S2 320 aaPredicted RBP21.01■□□□□ 0.95
PFDN6-207ENST00000491382 USP16Q9Y5T5 823 aa21.01■□□□□ 0.95
PFDN6-207ENST00000491382 CCDC184Q52MB2 194 aa21■□□□□ 0.95
PFDN6-207ENST00000491382 USPL1Q5W0Q7 1092 aa21■□□□□ 0.95
PFDN6-207ENST00000491382 PARP3Q9Y6F1 533 aa21■□□□□ 0.95
PFDN6-207ENST00000491382 SCN7AQ01118 1682 aa20.99■□□□□ 0.95
PFDN6-207ENST00000491382 PRAMEF22A3QJZ6 481 aa20.99■□□□□ 0.95
PFDN6-207ENST00000491382 A1BGP04217 495 aa20.99■□□□□ 0.95
PFDN6-207ENST00000491382 FKBP8Q14318 412 aa20.99■□□□□ 0.95
PFDN6-207ENST00000491382 NLGN2Q8NFZ4 835 aa20.99■□□□□ 0.95
PFDN6-207ENST00000491382 KIF13BQ9NQT8 1826 aa20.99■□□□□ 0.95
PFDN6-207ENST00000491382 EIF4A1P60842 406 aaKnown RBP20.98■□□□□ 0.95
PFDN6-207ENST00000491382 TRIM35Q9UPQ4 493 aa20.98■□□□□ 0.95
PFDN6-207ENST00000491382 APAF1O14727 1248 aa20.97■□□□□ 0.95
PFDN6-207ENST00000491382 BCORQ6W2J9 1755 aa20.96■□□□□ 0.95
PFDN6-207ENST00000491382 GIGYF1O75420 1035 aaPredicted RBP20.96■□□□□ 0.95
PFDN6-207ENST00000491382 GPR162Q16538 588 aa20.95■□□□□ 0.94
PFDN6-207ENST00000491382 C10orf71Q711Q0 1435 aa20.95■□□□□ 0.94
PFDN6-207ENST00000491382 CALD1Q05682 793 aaKnown RBP20.94■□□□□ 0.94
PFDN6-207ENST00000491382 PELP1Q8IZL8 1130 aaKnown RBP20.94■□□□□ 0.94
PFDN6-207ENST00000491382 TBC1D2BQ9UPU7 963 aa20.94■□□□□ 0.94
PFDN6-207ENST00000491382 TM4SF1P30408 202 aa20.93■□□□□ 0.94
PFDN6-207ENST00000491382 PIP4K2AP48426 406 aaPredicted RBP20.93■□□□□ 0.94
PFDN6-207ENST00000491382 DZIP3Q86Y13 1208 aaKnown RBP20.93■□□□□ 0.94
PFDN6-207ENST00000491382 LAS1LQ9Y4W2 734 aaKnown RBP20.93■□□□□ 0.94
PFDN6-207ENST00000491382 CHL1O00533 1208 aa20.92■□□□□ 0.94
PFDN6-207ENST00000491382 DDR1Q08345 913 aa20.92■□□□□ 0.94
PFDN6-207ENST00000491382 BCL2L12Q9HB09 334 aa20.92■□□□□ 0.94
PFDN6-207ENST00000491382 AFDNP55196 1824 aaKnown RBP20.92■□□□□ 0.94
PFDN6-207ENST00000491382 POLRMTO00411 1230 aaKnown RBP20.91■□□□□ 0.94
PFDN6-207ENST00000491382 NFIXQ14938 502 aa20.91■□□□□ 0.94
PFDN6-207ENST00000491382 NRXN2Q9P2S2 1712 aa20.9■□□□□ 0.94
PFDN6-207ENST00000491382 ERBB4Q15303 1308 aa20.9■□□□□ 0.94
PFDN6-207ENST00000491382 NBPF26B4DH59 902 aa20.9■□□□□ 0.94
PFDN6-207ENST00000491382 TGFB2P61812 414 aa20.9■□□□□ 0.94
PFDN6-207ENST00000491382 NBPF10Q6P3W6 841 aaKnown RBP20.9■□□□□ 0.94
PFDN6-207ENST00000491382 NBPF15Q8N660 670 aa20.9■□□□□ 0.94
PFDN6-207ENST00000491382 CFAP44Q96MT7 982 aa20.9■□□□□ 0.94
PFDN6-207ENST00000491382 N4BP2Q86UW6 1770 aaPredicted RBP20.9■□□□□ 0.94
PFDN6-207ENST00000491382 KIAA1551Q9HCM1 1747 aa20.9■□□□□ 0.94
PFDN6-207ENST00000491382 CAMTA2O94983 1202 aa20.89■□□□□ 0.93
PFDN6-207ENST00000491382 ZNF652Q9Y2D9 606 aa20.89■□□□□ 0.93
PFDN6-207ENST00000491382 PXDNLA1KZ92 1463 aa20.88■□□□□ 0.93
PFDN6-207ENST00000491382 CHD4Q14839 1912 aa20.88■□□□□ 0.93
PFDN6-207ENST00000491382 BICDL1Q6ZP65 573 aa20.88■□□□□ 0.93
PFDN6-207ENST00000491382 RGL2O15211 777 aa20.87■□□□□ 0.93
PFDN6-207ENST00000491382 GRIN3BO60391 1043 aa20.87■□□□□ 0.93
PFDN6-207ENST00000491382 SERPINB2P05120 415 aa20.87■□□□□ 0.93
PFDN6-207ENST00000491382 GNAI1P63096 354 aa20.87■□□□□ 0.93
PFDN6-207ENST00000491382 TBC1D9BQ66K14 1250 aa20.87■□□□□ 0.93
PFDN6-207ENST00000491382 CLEC4GQ6UXB4 293 aa20.87■□□□□ 0.93
PFDN6-207ENST00000491382 IFT57Q9NWB7 429 aa20.87■□□□□ 0.93
PFDN6-207ENST00000491382 CARMIL3Q8ND23 1372 aa20.86■□□□□ 0.93
PFDN6-207ENST00000491382 MYL6BP14649 208 aa20.85■□□□□ 0.93
PFDN6-207ENST00000491382 EIF2S2P20042 333 aaKnown RBP20.85■□□□□ 0.93
PFDN6-207ENST00000491382 CCDC27Q2M243 656 aa20.85■□□□□ 0.93
PFDN6-207ENST00000491382 SETDB2Q96T68 719 aa20.85■□□□□ 0.93
PFDN6-207ENST00000491382 BRCA1P38398 1863 aaKnown RBP20.84■□□□□ 0.93
PFDN6-207ENST00000491382 YBX3P16989 372 aaKnown RBP eCLIP20.84■□□□□ 0.93
PFDN6-207ENST00000491382 NCBP3Q53F19 620 aaKnown RBP20.84■□□□□ 0.93
PFDN6-207ENST00000491382 KIF6Q6ZMV9 814 aa20.84■□□□□ 0.93
PFDN6-207ENST00000491382 MBIPQ9NS73 344 aa20.84■□□□□ 0.93
PFDN6-207ENST00000491382 A0A0G2JLW4 131 aa20.83■□□□□ 0.93
PFDN6-207ENST00000491382 HOXB7P09629 217 aa20.83■□□□□ 0.93
PFDN6-207ENST00000491382 ZNF853P0CG23 659 aa20.83■□□□□ 0.93
PFDN6-207ENST00000491382 YY1P25490 414 aa20.83■□□□□ 0.93
PFDN6-207ENST00000491382 FAM9BQ8IZU0 186 aa20.83■□□□□ 0.93
PFDN6-207ENST00000491382 NGEFQ8N5V2 710 aa20.83■□□□□ 0.93
PFDN6-207ENST00000491382 NPHP1O15259 732 aa20.82■□□□□ 0.92
PFDN6-207ENST00000491382 DPEP1P16444 411 aa20.82■□□□□ 0.92
PFDN6-207ENST00000491382 NUP98P52948 1817 aa20.82■□□□□ 0.92
PFDN6-207ENST00000491382 ERVV-1B6SEH8 477 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 358.7 ms