RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 VPS72Q15906 364 aa11.32□□□□□ -0.6
CNOT4-210ENST00000491203 E2F4Q16254 413 aa11.32□□□□□ -0.6
CNOT4-210ENST00000491203 TRPC5Q9UL62 973 aaPredicted RBP11.32□□□□□ -0.6
CNOT4-210ENST00000491203 CRB1P82279 1406 aa11.32□□□□□ -0.6
CNOT4-210ENST00000491203 CCDC184Q52MB2 194 aa11.31□□□□□ -0.6
CNOT4-210ENST00000491203 NBPF6Q5VWK0 638 aa11.31□□□□□ -0.6
CNOT4-210ENST00000491203 NBPF4Q96M43 638 aa11.31□□□□□ -0.6
CNOT4-210ENST00000491203 EYA1Q99502 592 aa11.31□□□□□ -0.6
CNOT4-210ENST00000491203 EPAS1Q99814 870 aa11.31□□□□□ -0.6
CNOT4-210ENST00000491203 CARD10Q9BWT7 1032 aa11.31□□□□□ -0.6
CNOT4-210ENST00000491203 TSHZ2Q9NRE2 1034 aa11.31□□□□□ -0.6
CNOT4-210ENST00000491203 ARIH1Q9Y4X5 557 aaPredicted RBP11.31□□□□□ -0.6
CNOT4-210ENST00000491203 SPATA31A5Q5VU36 1347 aa11.31□□□□□ -0.6
CNOT4-210ENST00000491203 SPATA31A7Q8IWB4 1347 aa11.31□□□□□ -0.6
CNOT4-210ENST00000491203 FAM208AQ9UK61 1670 aaKnown RBP11.3□□□□□ -0.6
CNOT4-210ENST00000491203 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.3□□□□□ -0.6
CNOT4-210ENST00000491203 ATRNO75882 1429 aa11.3□□□□□ -0.6
CNOT4-210ENST00000491203 U2AF1L5P0DN76 240 aaPredicted RBP11.3□□□□□ -0.6
CNOT4-210ENST00000491203 PRIM1P49642 420 aaKnown RBP11.3□□□□□ -0.6
CNOT4-210ENST00000491203 U2AF1Q01081 240 aaKnown RBP eCLIP11.3□□□□□ -0.6
CNOT4-210ENST00000491203 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
CNOT4-210ENST00000491203 C6orf132Q5T0Z8 1188 aa11.3□□□□□ -0.6
CNOT4-210ENST00000491203 QTRT2Q9H974 415 aaKnown RBP11.3□□□□□ -0.6
CNOT4-210ENST00000491203 USP35Q9P2H5 1018 aa11.3□□□□□ -0.6
CNOT4-210ENST00000491203 SPATA31A1Q5TZJ5 1347 aa11.3□□□□□ -0.6
CNOT4-210ENST00000491203 IGSF1Q8N6C5 1336 aa11.3□□□□□ -0.6
CNOT4-210ENST00000491203 TCP11L2Q8N4U5 519 aa11.29□□□□□ -0.6
CNOT4-210ENST00000491203 USHBP1Q8N6Y0 703 aa11.29□□□□□ -0.6
CNOT4-210ENST00000491203 SULT6B1Q6IMI4 303 aa11.28□□□□□ -0.6
CNOT4-210ENST00000491203 VSIG10Q8N0Z9 540 aa11.28□□□□□ -0.6
CNOT4-210ENST00000491203 GJD4Q96KN9 370 aaPredicted RBP11.28□□□□□ -0.6
CNOT4-210ENST00000491203 THRAP3Q9Y2W1 955 aaKnown RBP11.28□□□□□ -0.6
CNOT4-210ENST00000491203 HMOX1P09601 288 aa11.27□□□□□ -0.61
CNOT4-210ENST00000491203 AEBP1Q8IUX7 1158 aa11.27□□□□□ -0.61
CNOT4-210ENST00000491203 RAPGEF4Q8WZA2 1011 aa11.27□□□□□ -0.61
CNOT4-210ENST00000491203 RGS17Q9UGC6 210 aaPredicted RBP11.27□□□□□ -0.61
CNOT4-210ENST00000491203 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
CNOT4-210ENST00000491203 RGPD1P0DJD0 1748 aa11.26□□□□□ -0.61
CNOT4-210ENST00000491203 RGPD2P0DJD1 1756 aa11.26□□□□□ -0.61
CNOT4-210ENST00000491203 IL2RBP14784 551 aa11.26□□□□□ -0.61
CNOT4-210ENST00000491203 RBM6P78332 1123 aaKnown RBP11.26□□□□□ -0.61
CNOT4-210ENST00000491203 BARGINQ6ZT62 677 aa11.26□□□□□ -0.61
CNOT4-210ENST00000491203 PNISRQ8TF01 805 aaKnown RBP11.26□□□□□ -0.61
CNOT4-210ENST00000491203 CDCA7Q9BWT1 371 aaPredicted RBP11.26□□□□□ -0.61
CNOT4-210ENST00000491203 A0A0G2JS52 829 aa11.25□□□□□ -0.61
CNOT4-210ENST00000491203 SPDYE16A6NNV3 312 aaPredicted RBP11.25□□□□□ -0.61
CNOT4-210ENST00000491203 FCHSD2O94868 740 aa11.25□□□□□ -0.61
CNOT4-210ENST00000491203 TATP17735 454 aaPredicted RBP11.25□□□□□ -0.61
CNOT4-210ENST00000491203 RXRBP28702 533 aa11.25□□□□□ -0.61
CNOT4-210ENST00000491203 MYT1Q01538 1121 aa11.25□□□□□ -0.61
CNOT4-210ENST00000491203 FAM98CQ17RN3 349 aaKnown RBP11.25□□□□□ -0.61
CNOT4-210ENST00000491203 TSR1Q2NL82 804 aaKnown RBP11.25□□□□□ -0.61
CNOT4-210ENST00000491203 THSD4Q6ZMP0 1018 aa11.25□□□□□ -0.61
CNOT4-210ENST00000491203 PNNQ9H307 717 aaKnown RBP11.25□□□□□ -0.61
CNOT4-210ENST00000491203 RABGEF1Q9UJ41 708 aa11.25□□□□□ -0.61
CNOT4-210ENST00000491203 ADAMTS8Q9UP79 889 aa11.25□□□□□ -0.61
CNOT4-210ENST00000491203 KDRP35968 1356 aa11.25□□□□□ -0.61
CNOT4-210ENST00000491203 GLI3P10071 1580 aa11.24□□□□□ -0.61
CNOT4-210ENST00000491203 NEFMP07197 916 aa11.24□□□□□ -0.61
CNOT4-210ENST00000491203 PRKAR2BP31323 418 aa11.24□□□□□ -0.61
CNOT4-210ENST00000491203 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
CNOT4-210ENST00000491203 NBR1Q14596 966 aa11.24□□□□□ -0.61
CNOT4-210ENST00000491203 POTEAQ6S8J7 498 aa11.24□□□□□ -0.61
CNOT4-210ENST00000491203 MRPL50Q8N5N7 158 aaKnown RBP11.24□□□□□ -0.61
CNOT4-210ENST00000491203 RSPH6AQ9H0K4 717 aa11.24□□□□□ -0.61
CNOT4-210ENST00000491203 FAM9BQ8IZU0 186 aa11.23□□□□□ -0.61
CNOT4-210ENST00000491203 WDR70Q9NW82 654 aa11.23□□□□□ -0.61
CNOT4-210ENST00000491203 PLA2G2EQ9NZK7 142 aa11.23□□□□□ -0.61
CNOT4-210ENST00000491203 DISP2A7MBM2 1401 aa11.23□□□□□ -0.61
CNOT4-210ENST00000491203 MEGF6O75095 1541 aa11.23□□□□□ -0.61
CNOT4-210ENST00000491203 OVOS2A0A0G2JMS6 1433 aa11.22□□□□□ -0.61
CNOT4-210ENST00000491203 PTPN5P54829 565 aa11.22□□□□□ -0.61
CNOT4-210ENST00000491203 PLEKHO1Q53GL0 409 aaPredicted RBP11.22□□□□□ -0.61
CNOT4-210ENST00000491203 MAPK8IP3Q9UPT6 1336 aa11.22□□□□□ -0.61
CNOT4-210ENST00000491203 PLEKHG2Q9H7P9 1386 aa11.21□□□□□ -0.61
CNOT4-210ENST00000491203 EXOC5O00471 708 aa11.21□□□□□ -0.61
CNOT4-210ENST00000491203 ONECUT3O60422 494 aaPredicted RBP11.21□□□□□ -0.61
CNOT4-210ENST00000491203 DDB1Q16531 1140 aa11.21□□□□□ -0.61
CNOT4-210ENST00000491203 AMOTQ4VCS5 1084 aa11.21□□□□□ -0.61
CNOT4-210ENST00000491203 CCDC146Q8IYE0 955 aa11.21□□□□□ -0.61
CNOT4-210ENST00000491203 SEPT12Q8IYM1 358 aa11.21□□□□□ -0.61
CNOT4-210ENST00000491203 ZCRB1Q8TBF4 217 aaKnown RBP11.21□□□□□ -0.61
CNOT4-210ENST00000491203 WNT2BQ93097 391 aa11.21□□□□□ -0.61
CNOT4-210ENST00000491203 RUNDC1Q96C34 613 aa11.21□□□□□ -0.61
CNOT4-210ENST00000491203 NBPF3Q9H094 633 aa11.21□□□□□ -0.61
CNOT4-210ENST00000491203 KIAA1468Q9P260 1216 aa11.21□□□□□ -0.61
CNOT4-210ENST00000491203 SPG7Q9UQ90 795 aa11.21□□□□□ -0.61
CNOT4-210ENST00000491203 PARP4Q9UKK3 1724 aaKnown RBP11.21□□□□□ -0.62
CNOT4-210ENST00000491203 PLEKHF1Q96S99 279 aa11.2□□□□□ -0.62
CNOT4-210ENST00000491203 WNK3Q9BYP7 1800 aa11.2□□□□□ -0.62
CNOT4-210ENST00000491203 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
CNOT4-210ENST00000491203 PDE3BQ13370 1112 aa11.19□□□□□ -0.62
CNOT4-210ENST00000491203 ZNF530Q6P9A1 599 aaPredicted RBP11.19□□□□□ -0.62
CNOT4-210ENST00000491203 GAS2L2Q8NHY3 880 aa11.19□□□□□ -0.62
CNOT4-210ENST00000491203 PHACTR3Q96KR7 559 aa11.19□□□□□ -0.62
CNOT4-210ENST00000491203 THSD7AQ9UPZ6 1657 aa11.19□□□□□ -0.62
CNOT4-210ENST00000491203 TNS2Q63HR2 1409 aa11.18□□□□□ -0.62
CNOT4-210ENST00000491203 PCDH11XQ9BZA7 1347 aa11.18□□□□□ -0.62
CNOT4-210ENST00000491203 PCDH11YQ9BZA8 1340 aa11.18□□□□□ -0.62
CNOT4-210ENST00000491203 MTHFSDQ2M296 383 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms