RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 USP17L5A8MUK1 530 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 CDK2AP1O14519 115 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 GPR37L1O60883 481 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 SLURP2P0DP57 97 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 ALAS2P22557 587 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 FGFR3P22607 806 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 RFX1P22670 979 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 CTBSQ01459 385 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 GAS6Q14393 721 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 LRRC69Q6ZNQ3 347 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 EDARADDQ8WWZ3 215 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 L3MBTL2Q969R5 705 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 VTI1AQ96AJ9 217 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 KLRG1Q96E93 195 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 NGLY1Q96IV0 654 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 ZCCHC2Q9C0B9 1178 aaKnown RBP3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 ALG2Q9H553 416 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 TFIP11Q9UBB9 837 aaKnown RBP3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 PCDHGC4Q9Y5F7 938 aa3.57□□□□□ -1.84
SNRNP40-207ENST00000491106 SERTM1A2A2V5 107 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 PALM3A6NDB9 673 aaPredicted RBP3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 SFI1A8K8P3 1242 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 NEURL1BA8MQ27 555 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 BNIP3LO60238 219 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 LORP23490 312 aaPredicted RBP3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 LMOD1P29536 600 aaPredicted RBP3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 NOS2P35228 1153 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 TBC1D8BQ0IIM8 1120 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 KCNMA1Q12791 1236 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 LBRQ14739 615 aaKnown RBP3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 PROSER2Q86WR7 435 aaPredicted RBP3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 OGFOD1Q8N543 542 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 C1orf216Q8TAB5 229 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 RHPN1Q8TCX5 695 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 ACDQ96AP0 544 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 FHDC1Q9C0D6 1143 aaPredicted RBP3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 ZNF358Q9NW07 568 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 GGA1Q9UJY5 639 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 GDF2Q9UK05 429 aaPredicted RBP3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 ZNF777Q9ULD5 760 aaPredicted RBP3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 ATXN7L1Q9ULK2 861 aaPredicted RBP3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 PCDHGA11Q9Y5H2 935 aa3.56□□□□□ -1.84
SNRNP40-207ENST00000491106 USP17L3A6NCW0 530 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 USP17L4A6NCW7 530 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 TMEM229AB2RXF0 380 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 PIK3R2O00459 728 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 ATP9BO43861 1147 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 PPP1R12BO60237 982 aaPredicted RBP3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 LGR5O75473 907 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 CD33P20138 364 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 SCNN1DP51172 638 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 NEUROD1Q13562 356 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 CDCA8Q53HL2 280 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 KANK3Q6NY19 840 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 USP17L2Q6R6M4 530 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 USP17L1Q7RTZ2 530 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 SLC9A9Q8IVB4 645 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 GOLGA6L1Q8N7Z2 621 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 NFATC2IPQ8NCF5 419 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 GLMNQ92990 594 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 CEP63Q96MT8 703 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 VRTNQ9H8Y1 702 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 ANKIB1Q9P2G1 1089 aa3.55□□□□□ -1.84
SNRNP40-207ENST00000491106 OIP5O43482 229 aa3.54□□□□□ -1.84
SNRNP40-207ENST00000491106 MAPTP10636 758 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-207ENST00000491106 TXLNAP40222 546 aa3.54□□□□□ -1.84
SNRNP40-207ENST00000491106 PCBP4P57723 403 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-207ENST00000491106 GRIN2CQ14957 1233 aa3.54□□□□□ -1.84
SNRNP40-207ENST00000491106 NLRP8Q86W28 1048 aa3.54□□□□□ -1.84
SNRNP40-207ENST00000491106 TSEN2Q8NCE0 465 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-207ENST00000491106 SCG3Q8WXD2 468 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-207ENST00000491106 SLC4A9Q96Q91 983 aa3.54□□□□□ -1.84
SNRNP40-207ENST00000491106 ZIC5Q96T25 663 aa3.54□□□□□ -1.84
SNRNP40-207ENST00000491106 MARK1Q9P0L2 795 aa3.54□□□□□ -1.84
SNRNP40-207ENST00000491106 MKL2Q9ULH7 1088 aa3.54□□□□□ -1.84
SNRNP40-207ENST00000491106 HRH3Q9Y5N1 445 aa3.54□□□□□ -1.84
SNRNP40-207ENST00000491106 ATAD2Q6PL18 1390 aa3.53□□□□□ -1.84
SNRNP40-207ENST00000491106 ARHGEF15O94989 841 aa3.53□□□□□ -1.84
SNRNP40-207ENST00000491106 LARGE2Q8N3Y3 721 aa3.53□□□□□ -1.84
SNRNP40-207ENST00000491106 PNMA5Q96PV4 448 aa3.53□□□□□ -1.84
SNRNP40-207ENST00000491106 CRISPLD1Q9H336 500 aa3.53□□□□□ -1.84
SNRNP40-207ENST00000491106 SCHIP1Q9P0W5 487 aaPredicted RBP3.53□□□□□ -1.84
SNRNP40-207ENST00000491106 CHIC2Q9UKJ5 165 aa3.53□□□□□ -1.84
SNRNP40-207ENST00000491106 ZBTB7BO15156 539 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-207ENST00000491106 ADH6P28332 368 aa3.52□□□□□ -1.85
SNRNP40-207ENST00000491106 SEC13P55735 322 aa3.52□□□□□ -1.85
SNRNP40-207ENST00000491106 PSMA6P60900 246 aaKnown RBP3.52□□□□□ -1.85
SNRNP40-207ENST00000491106 CLDN10P78369 228 aa3.52□□□□□ -1.85
SNRNP40-207ENST00000491106 TEAD4Q15561 434 aa3.52□□□□□ -1.85
SNRNP40-207ENST00000491106 BTBD6Q96KE9 485 aa3.52□□□□□ -1.85
SNRNP40-207ENST00000491106 TSPAN10Q9H1Z9 355 aaPredicted RBP3.52□□□□□ -1.85
SNRNP40-207ENST00000491106 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.52□□□□□ -1.85
SNRNP40-207ENST00000491106 ZDHHC3Q9NYG2 299 aa3.52□□□□□ -1.85
SNRNP40-207ENST00000491106 C2CD2LO14523 706 aa3.51□□□□□ -1.85
SNRNP40-207ENST00000491106 MSTNO14793 375 aa3.51□□□□□ -1.85
SNRNP40-207ENST00000491106 SNRPNP63162 240 aaKnown RBP3.51□□□□□ -1.85
SNRNP40-207ENST00000491106 TNP2Q05952 138 aa3.51□□□□□ -1.85
SNRNP40-207ENST00000491106 DPYDQ12882 1025 aa3.51□□□□□ -1.85
SNRNP40-207ENST00000491106 MTFR1Q15390 333 aa3.51□□□□□ -1.85
SNRNP40-207ENST00000491106 GAS2L2Q8NHY3 880 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms