RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 RARSP54136 660 aaKnown RBP23.93■■□□□ 1.42
MCF2L-230ENST00000491028 UPF1Q92900 1129 aaKnown RBP eCLIP23.93■■□□□ 1.42
MCF2L-230ENST00000491028 USP16Q9Y5T5 823 aa23.93■■□□□ 1.42
MCF2L-230ENST00000491028 EIF2S2P20042 333 aaKnown RBP23.92■■□□□ 1.42
MCF2L-230ENST00000491028 STK31Q9BXU1 1019 aa23.92■■□□□ 1.42
MCF2L-230ENST00000491028 ITPK1Q13572 414 aa23.91■■□□□ 1.42
MCF2L-230ENST00000491028 CYP19A1P11511 503 aaPredicted RBP23.9■■□□□ 1.42
MCF2L-230ENST00000491028 SSH1Q8WYL5 1049 aa23.9■■□□□ 1.42
MCF2L-230ENST00000491028 DBF4Q9UBU7 674 aaPredicted RBP23.9■■□□□ 1.42
MCF2L-230ENST00000491028 BAG6P46379 1132 aa23.89■■□□□ 1.41
MCF2L-230ENST00000491028 SMC4Q9NTJ3 1288 aa23.89■■□□□ 1.41
MCF2L-230ENST00000491028 C4BP0C0L5 1744 aa23.89■■□□□ 1.41
MCF2L-230ENST00000491028 BRPF1P55201 1214 aaPredicted RBP23.88■■□□□ 1.41
MCF2L-230ENST00000491028 TXNRD1Q16881 649 aa23.88■■□□□ 1.41
MCF2L-230ENST00000491028 NECTIN2Q92692 538 aa23.88■■□□□ 1.41
MCF2L-230ENST00000491028 DDX21Q9NR30 783 aaKnown RBP eCLIP23.88■■□□□ 1.41
MCF2L-230ENST00000491028 CNTNAP4Q9C0A0 1308 aa23.87■■□□□ 1.41
MCF2L-230ENST00000491028 CHPF2Q9P2E5 772 aa23.87■■□□□ 1.41
MCF2L-230ENST00000491028 MRPL50Q8N5N7 158 aaKnown RBP23.86■■□□□ 1.41
MCF2L-230ENST00000491028 LINC00116Q8NCU8 138 aa23.86■■□□□ 1.41
MCF2L-230ENST00000491028 KIF16BQ96L93 1317 aa23.85■■□□□ 1.41
MCF2L-230ENST00000491028 MYH14Q7Z406 1995 aaKnown RBP23.85■■□□□ 1.41
MCF2L-230ENST00000491028 CRKLP46109 303 aaKnown RBP23.85■■□□□ 1.41
MCF2L-230ENST00000491028 BCL2L13Q9BXK5 485 aa23.85■■□□□ 1.41
MCF2L-230ENST00000491028 LRRC4BQ9NT99 713 aa23.85■■□□□ 1.41
MCF2L-230ENST00000491028 CCDC87Q9NVE4 849 aa23.85■■□□□ 1.41
MCF2L-230ENST00000491028 HYPKQ9NX55 129 aa23.85■■□□□ 1.41
MCF2L-230ENST00000491028 TCERG1O14776 1098 aaKnown RBP23.84■■□□□ 1.41
MCF2L-230ENST00000491028 SLC4A2P04920 1241 aa23.84■■□□□ 1.41
MCF2L-230ENST00000491028 PDIA6Q15084 440 aa23.84■■□□□ 1.41
MCF2L-230ENST00000491028 RC3H1Q5TC82 1133 aaKnown RBP23.84■■□□□ 1.41
MCF2L-230ENST00000491028 PROM2Q8N271 834 aa23.84■■□□□ 1.41
MCF2L-230ENST00000491028 CAMKK2Q96RR4 588 aa23.84■■□□□ 1.41
MCF2L-230ENST00000491028 BCAR3O75815 825 aa23.83■■□□□ 1.41
MCF2L-230ENST00000491028 A1BGP04217 495 aa23.83■■□□□ 1.41
MCF2L-230ENST00000491028 KCNQ4P56696 695 aa23.83■■□□□ 1.41
MCF2L-230ENST00000491028 NUP188Q5SRE5 1749 aa23.83■■□□□ 1.41
MCF2L-230ENST00000491028 EN1Q05925 392 aaPredicted RBP23.82■■□□□ 1.4
MCF2L-230ENST00000491028 INTS5Q6P9B9 1019 aaKnown RBP23.82■■□□□ 1.4
MCF2L-230ENST00000491028 ZBTB1Q9Y2K1 713 aa23.82■■□□□ 1.4
MCF2L-230ENST00000491028 NBPF26B4DH59 902 aa23.81■■□□□ 1.4
MCF2L-230ENST00000491028 IL6STP40189 918 aaPredicted RBP23.81■■□□□ 1.4
MCF2L-230ENST00000491028 NBPF14Q5TI25 921 aa23.81■■□□□ 1.4
MCF2L-230ENST00000491028 NBPF10Q6P3W6 841 aaKnown RBP23.81■■□□□ 1.4
MCF2L-230ENST00000491028 NBPF15Q8N660 670 aa23.81■■□□□ 1.4
MCF2L-230ENST00000491028 MYL6BP14649 208 aa23.8■■□□□ 1.4
MCF2L-230ENST00000491028 EZH2Q15910 746 aaKnown RBP23.8■■□□□ 1.4
MCF2L-230ENST00000491028 PROSER3Q2NL68 480 aa23.8■■□□□ 1.4
MCF2L-230ENST00000491028 LRP10Q7Z4F1 713 aa23.8■■□□□ 1.4
MCF2L-230ENST00000491028 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.8■■□□□ 1.4
MCF2L-230ENST00000491028 PTPRCP08575 1304 aa23.8■■□□□ 1.4
MCF2L-230ENST00000491028 UBR3Q6ZT12 1888 aa23.79■■□□□ 1.4
MCF2L-230ENST00000491028 ANXA1P04083 346 aa23.79■■□□□ 1.4
MCF2L-230ENST00000491028 FLIIQ13045 1269 aa23.79■■□□□ 1.4
MCF2L-230ENST00000491028 IPO8O15397 1037 aaKnown RBP23.78■■□□□ 1.4
MCF2L-230ENST00000491028 CANXP27824 592 aaKnown RBP23.78■■□□□ 1.4
MCF2L-230ENST00000491028 PIP4K2AP48426 406 aaPredicted RBP23.78■■□□□ 1.4
MCF2L-230ENST00000491028 DEFB132Q7Z7B7 95 aa23.78■■□□□ 1.4
MCF2L-230ENST00000491028 RNF123Q5XPI4 1314 aa23.78■■□□□ 1.4
MCF2L-230ENST00000491028 ARHGAP45Q92619 1136 aa23.77■■□□□ 1.4
MCF2L-230ENST00000491028 AK7Q96M32 723 aa23.77■■□□□ 1.4
MCF2L-230ENST00000491028 PHAXQ9H814 394 aaKnown RBP23.77■■□□□ 1.4
MCF2L-230ENST00000491028 NOB1Q9ULX3 412 aaKnown RBP23.77■■□□□ 1.4
MCF2L-230ENST00000491028 RPS6KA4O75676 772 aa23.76■■□□□ 1.39
MCF2L-230ENST00000491028 EIF5P55010 431 aaKnown RBP23.76■■□□□ 1.39
MCF2L-230ENST00000491028 RRP1P56182 461 aaKnown RBP23.76■■□□□ 1.39
MCF2L-230ENST00000491028 ZKSCAN2Q63HK3 967 aa23.76■■□□□ 1.39
MCF2L-230ENST00000491028 G2E3Q7L622 706 aa23.76■■□□□ 1.39
MCF2L-230ENST00000491028 NPM2Q86SE8 214 aaKnown RBP23.76■■□□□ 1.39
MCF2L-230ENST00000491028 FRAT1Q92837 279 aaPredicted RBP23.76■■□□□ 1.39
MCF2L-230ENST00000491028 GNPATO15228 680 aa23.75■■□□□ 1.39
MCF2L-230ENST00000491028 SUPT16HQ9Y5B9 1047 aaKnown RBP23.75■■□□□ 1.39
MCF2L-230ENST00000491028 QSER1Q2KHR3 1735 aa23.75■■□□□ 1.39
MCF2L-230ENST00000491028 COL15A1P39059 1388 aa23.75■■□□□ 1.39
MCF2L-230ENST00000491028 DDX58O95786 925 aaKnown RBP23.74■■□□□ 1.39
MCF2L-230ENST00000491028 FKBP5Q13451 457 aaPredicted RBP23.74■■□□□ 1.39
MCF2L-230ENST00000491028 COPS6Q7L5N1 327 aa23.74■■□□□ 1.39
MCF2L-230ENST00000491028 XAGE3Q8WTP9 111 aa23.74■■□□□ 1.39
MCF2L-230ENST00000491028 API5Q9BZZ5 524 aaKnown RBP23.74■■□□□ 1.39
MCF2L-230ENST00000491028 RTCBQ9Y3I0 505 aaKnown RBP23.74■■□□□ 1.39
MCF2L-230ENST00000491028 TUBGCP6Q96RT7 1819 aa23.74■■□□□ 1.39
MCF2L-230ENST00000491028 BCORQ6W2J9 1755 aa23.73■■□□□ 1.39
MCF2L-230ENST00000491028 ARFGEF2Q9Y6D5 1785 aa23.73■■□□□ 1.39
MCF2L-230ENST00000491028 A0A087WZG4 1122 aa23.73■■□□□ 1.39
MCF2L-230ENST00000491028 ATF7IPQ6VMQ6 1270 aa23.73■■□□□ 1.39
MCF2L-230ENST00000491028 AKT1S1Q96B36 256 aa23.73■■□□□ 1.39
MCF2L-230ENST00000491028 ZNF330Q9Y3S2 320 aaPredicted RBP23.73■■□□□ 1.39
MCF2L-230ENST00000491028 C4AP0C0L4 1744 aa23.73■■□□□ 1.39
MCF2L-230ENST00000491028 N4BP2Q86UW6 1770 aaPredicted RBP23.73■■□□□ 1.39
MCF2L-230ENST00000491028 ADRA2BP18089 450 aa23.72■■□□□ 1.39
MCF2L-230ENST00000491028 PXDNLA1KZ92 1463 aa23.72■■□□□ 1.39
MCF2L-230ENST00000491028 SCN7AQ01118 1682 aa23.72■■□□□ 1.39
MCF2L-230ENST00000491028 MS4A1P11836 297 aa23.71■■□□□ 1.39
MCF2L-230ENST00000491028 SSFA2P28290 1259 aa23.71■■□□□ 1.39
MCF2L-230ENST00000491028 AIMP1Q12904 312 aaKnown RBP23.71■■□□□ 1.39
MCF2L-230ENST00000491028 TRIM27P14373 513 aa23.7■■□□□ 1.38
MCF2L-230ENST00000491028 KIF6Q6ZMV9 814 aa23.7■■□□□ 1.38
MCF2L-230ENST00000491028 ADCY9O60503 1353 aa23.69■■□□□ 1.38
MCF2L-230ENST00000491028 ZNF827Q17R98 1081 aa23.69■■□□□ 1.38
MCF2L-230ENST00000491028 KSR2Q6VAB6 950 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 276.9 ms