RNA–Protein interactions for RNA: ENST00000490990.1

RGPD6-211, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-211ENST00000490990 UTRNP46939 3433 aa27.68■■■□□ 2.02
RGPD6-211ENST00000490990 COL15A1P39059 1388 aa27.67■■■□□ 2.02
RGPD6-211ENST00000490990 KIF13BQ9NQT8 1826 aa27.67■■■□□ 2.02
RGPD6-211ENST00000490990 TAF7Q15545 349 aaPredicted RBP27.66■■■□□ 2.02
RGPD6-211ENST00000490990 GPR162Q16538 588 aa27.65■■■□□ 2.02
RGPD6-211ENST00000490990 CANXP27824 592 aaKnown RBP27.64■■■□□ 2.02
RGPD6-211ENST00000490990 FKBP8Q14318 412 aa27.64■■■□□ 2.02
RGPD6-211ENST00000490990 KDM3BQ7LBC6 1761 aa27.63■■■□□ 2.01
RGPD6-211ENST00000490990 CHD4Q14839 1912 aa27.63■■■□□ 2.01
RGPD6-211ENST00000490990 ZNF316A6NFI3 1004 aaPredicted RBP27.63■■■□□ 2.01
RGPD6-211ENST00000490990 ZPR1O75312 459 aa27.63■■■□□ 2.01
RGPD6-211ENST00000490990 USPL1Q5W0Q7 1092 aa27.63■■■□□ 2.01
RGPD6-211ENST00000490990 YY1P25490 414 aa27.62■■■□□ 2.01
RGPD6-211ENST00000490990 EIF5P55010 431 aaKnown RBP27.62■■■□□ 2.01
RGPD6-211ENST00000490990 NARFQ9UHQ1 456 aa27.62■■■□□ 2.01
RGPD6-211ENST00000490990 C10orf71Q711Q0 1435 aa27.61■■■□□ 2.01
RGPD6-211ENST00000490990 GOLGB1Q14789 3259 aaKnown RBP27.61■■■□□ 2.01
RGPD6-211ENST00000490990 PELP1Q8IZL8 1130 aaKnown RBP27.61■■■□□ 2.01
RGPD6-211ENST00000490990 THUMPD2Q9BTF0 503 aaKnown RBP27.61■■■□□ 2.01
RGPD6-211ENST00000490990 PARP3Q9Y6F1 533 aa27.61■■■□□ 2.01
RGPD6-211ENST00000490990 WDR43Q15061 677 aaKnown RBP eCLIP27.6■■■□□ 2.01
RGPD6-211ENST00000490990 MIS18AQ9NYP9 233 aa27.6■■■□□ 2.01
RGPD6-211ENST00000490990 USP16Q9Y5T5 823 aa27.6■■■□□ 2.01
RGPD6-211ENST00000490990 KIAA1551Q9HCM1 1747 aa27.6■■■□□ 2.01
RGPD6-211ENST00000490990 PRAMEF22A3QJZ6 481 aa27.59■■■□□ 2.01
RGPD6-211ENST00000490990 SNRPA1P09661 255 aaKnown RBP27.59■■■□□ 2.01
RGPD6-211ENST00000490990 YBX3P16989 372 aaKnown RBP eCLIP27.59■■■□□ 2.01
RGPD6-211ENST00000490990 PNISRQ8TF01 805 aaKnown RBP27.59■■■□□ 2.01
RGPD6-211ENST00000490990 A1BGP04217 495 aa27.58■■■□□ 2.01
RGPD6-211ENST00000490990 TM4SF1P30408 202 aa27.58■■■□□ 2.01
RGPD6-211ENST00000490990 IL6STP40189 918 aaPredicted RBP27.58■■■□□ 2.01
RGPD6-211ENST00000490990 TMPOP42166 694 aaKnown RBP27.58■■■□□ 2.01
RGPD6-211ENST00000490990 RIPK4P57078 832 aa27.58■■■□□ 2.01
RGPD6-211ENST00000490990 DDR1Q08345 913 aa27.58■■■□□ 2.01
RGPD6-211ENST00000490990 BCL2L12Q9HB09 334 aa27.58■■■□□ 2.01
RGPD6-211ENST00000490990 A0A087WZG4 1122 aa27.57■■■□□ 2
RGPD6-211ENST00000490990 CCDC146Q8IYE0 955 aa27.57■■■□□ 2
RGPD6-211ENST00000490990 ADAMTS8Q9UP79 889 aa27.57■■■□□ 2
RGPD6-211ENST00000490990 PXDNLA1KZ92 1463 aa27.56■■■□□ 2
RGPD6-211ENST00000490990 SCN7AQ01118 1682 aa27.56■■■□□ 2
RGPD6-211ENST00000490990 LAMB4A4D0S4 1761 aa27.55■■■□□ 2
RGPD6-211ENST00000490990 POLRMTO00411 1230 aaKnown RBP27.55■■■□□ 2
RGPD6-211ENST00000490990 RUNDC1Q96C34 613 aa27.55■■■□□ 2
RGPD6-211ENST00000490990 N4BP2Q86UW6 1770 aaPredicted RBP27.55■■■□□ 2
RGPD6-211ENST00000490990 TGFB2P61812 414 aa27.54■■■□□ 2
RGPD6-211ENST00000490990 GRIN3BO60391 1043 aa27.53■■■□□ 2
RGPD6-211ENST00000490990 LMOD3Q0VAK6 560 aa27.53■■■□□ 2
RGPD6-211ENST00000490990 NFIXQ14938 502 aa27.53■■■□□ 2
RGPD6-211ENST00000490990 ZNF330Q9Y3S2 320 aaPredicted RBP27.53■■■□□ 2
RGPD6-211ENST00000490990 AFDNP55196 1824 aaKnown RBP27.53■■■□□ 2
RGPD6-211ENST00000490990 RRP7AQ9Y3A4 280 aaKnown RBP27.52■■■□□ 2
RGPD6-211ENST00000490990 NRXN2Q9P2S2 1712 aa27.52■■■□□ 2
RGPD6-211ENST00000490990 EIF4A1P60842 406 aaKnown RBP27.51■■□□□ 1.99
RGPD6-211ENST00000490990 BCORQ6W2J9 1755 aa27.5■■□□□ 1.99
RGPD6-211ENST00000490990 PIP4K2AP48426 406 aaPredicted RBP27.5■■□□□ 1.99
RGPD6-211ENST00000490990 TBC1D2BQ9UPU7 963 aa27.5■■□□□ 1.99
RGPD6-211ENST00000490990 BRCA1P38398 1863 aaKnown RBP27.49■■□□□ 1.99
RGPD6-211ENST00000490990 GIGYF1O75420 1035 aaPredicted RBP27.49■■□□□ 1.99
RGPD6-211ENST00000490990 NEUROD2Q15784 382 aa27.48■■□□□ 1.99
RGPD6-211ENST00000490990 NPM2Q86SE8 214 aaKnown RBP27.48■■□□□ 1.99
RGPD6-211ENST00000490990 WWC3Q9ULE0 1092 aa27.48■■□□□ 1.99
RGPD6-211ENST00000490990 A0A0G2JLW4 131 aa27.47■■□□□ 1.99
RGPD6-211ENST00000490990 NBPF26B4DH59 902 aa27.47■■□□□ 1.99
RGPD6-211ENST00000490990 CAMTA2O94983 1202 aa27.47■■□□□ 1.99
RGPD6-211ENST00000490990 NBPF10Q6P3W6 841 aaKnown RBP27.47■■□□□ 1.99
RGPD6-211ENST00000490990 NBPF15Q8N660 670 aa27.47■■□□□ 1.99
RGPD6-211ENST00000490990 TRIM35Q9UPQ4 493 aa27.47■■□□□ 1.99
RGPD6-211ENST00000490990 DPEP1P16444 411 aa27.46■■□□□ 1.99
RGPD6-211ENST00000490990 DZIP3Q86Y13 1208 aaKnown RBP27.46■■□□□ 1.99
RGPD6-211ENST00000490990 BABAM1Q9NWV8 329 aa27.46■■□□□ 1.99
RGPD6-211ENST00000490990 TSPYL4Q9UJ04 414 aa27.46■■□□□ 1.99
RGPD6-211ENST00000490990 SERPINB2P05120 415 aa27.45■■□□□ 1.98
RGPD6-211ENST00000490990 TBC1D9BQ66K14 1250 aa27.45■■□□□ 1.98
RGPD6-211ENST00000490990 CCDC184Q52MB2 194 aa27.44■■□□□ 1.98
RGPD6-211ENST00000490990 KCNA3P22001 575 aa27.43■■□□□ 1.98
RGPD6-211ENST00000490990 BICDL1Q6ZP65 573 aa27.43■■□□□ 1.98
RGPD6-211ENST00000490990 CARMIL3Q8ND23 1372 aa27.39■■□□□ 1.98
RGPD6-211ENST00000490990 ANP32CO43423 234 aa27.39■■□□□ 1.98
RGPD6-211ENST00000490990 ARFGEF1Q9Y6D6 1849 aa27.39■■□□□ 1.97
RGPD6-211ENST00000490990 CHL1O00533 1208 aa27.38■■□□□ 1.97
RGPD6-211ENST00000490990 CLEC4GQ6UXB4 293 aa27.38■■□□□ 1.97
RGPD6-211ENST00000490990 ZNF784Q8NCA9 323 aaPredicted RBP27.38■■□□□ 1.97
RGPD6-211ENST00000490990 BCS1LQ9Y276 419 aa27.38■■□□□ 1.97
RGPD6-211ENST00000490990 APAF1O14727 1248 aa27.37■■□□□ 1.97
RGPD6-211ENST00000490990 RGL2O15211 777 aa27.37■■□□□ 1.97
RGPD6-211ENST00000490990 CHRNA5P30532 468 aa27.37■■□□□ 1.97
RGPD6-211ENST00000490990 ANKRD31Q8N7Z5 1873 aa27.36■■□□□ 1.97
RGPD6-211ENST00000490990 DLEC1Q9Y238 1755 aa27.36■■□□□ 1.97
RGPD6-211ENST00000490990 SETDB2Q96T68 719 aa27.36■■□□□ 1.97
RGPD6-211ENST00000490990 PIM2Q9P1W9 311 aa27.36■■□□□ 1.97
RGPD6-211ENST00000490990 ZNF652Q9Y2D9 606 aa27.35■■□□□ 1.97
RGPD6-211ENST00000490990 ERBB4Q15303 1308 aa27.35■■□□□ 1.97
RGPD6-211ENST00000490990 PRR5LQ6MZQ0 368 aa27.34■■□□□ 1.97
RGPD6-211ENST00000490990 LAS1LQ9Y4W2 734 aaKnown RBP27.33■■□□□ 1.97
RGPD6-211ENST00000490990 MYL6BP14649 208 aa27.31■■□□□ 1.96
RGPD6-211ENST00000490990 DALRD3Q5D0E6 543 aaKnown RBP27.31■■□□□ 1.96
RGPD6-211ENST00000490990 NGEFQ8N5V2 710 aa27.31■■□□□ 1.96
RGPD6-211ENST00000490990 CFAP44Q96MT7 982 aa27.31■■□□□ 1.96
RGPD6-211ENST00000490990 MRS2Q9HD23 443 aa27.31■■□□□ 1.96
RGPD6-211ENST00000490990 NUP98P52948 1817 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms