RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 TAF7Q15545 349 aaPredicted RBP20.14■□□□□ 0.81
COL27A1-206ENST00000490831 COL15A1P39059 1388 aa20.13■□□□□ 0.81
COL27A1-206ENST00000490831 ZNF316A6NFI3 1004 aaPredicted RBP20.13■□□□□ 0.81
COL27A1-206ENST00000490831 SRP68Q9UHB9 627 aaKnown RBP20.13■□□□□ 0.81
COL27A1-206ENST00000490831 EIF5P55010 431 aaKnown RBP20.12■□□□□ 0.81
COL27A1-206ENST00000490831 GOLGB1Q14789 3259 aaKnown RBP20.11■□□□□ 0.81
COL27A1-206ENST00000490831 NARFQ9UHQ1 456 aa20.11■□□□□ 0.81
COL27A1-206ENST00000490831 KIF13BQ9NQT8 1826 aa20.11■□□□□ 0.81
COL27A1-206ENST00000490831 FKBP8Q14318 412 aa20.1■□□□□ 0.81
COL27A1-206ENST00000490831 PNISRQ8TF01 805 aaKnown RBP20.1■□□□□ 0.81
COL27A1-206ENST00000490831 ZPR1O75312 459 aa20.09■□□□□ 0.81
COL27A1-206ENST00000490831 SNRPA1P09661 255 aaKnown RBP20.09■□□□□ 0.81
COL27A1-206ENST00000490831 C10orf71Q711Q0 1435 aa20.09■□□□□ 0.81
COL27A1-206ENST00000490831 KDM3BQ7LBC6 1761 aa20.08■□□□□ 0.81
COL27A1-206ENST00000490831 CANXP27824 592 aaKnown RBP20.08■□□□□ 0.81
COL27A1-206ENST00000490831 TM4SF1P30408 202 aa20.08■□□□□ 0.81
COL27A1-206ENST00000490831 IL6STP40189 918 aaPredicted RBP20.08■□□□□ 0.81
COL27A1-206ENST00000490831 TMPOP42166 694 aaKnown RBP20.08■□□□□ 0.81
COL27A1-206ENST00000490831 WDR43Q15061 677 aaKnown RBP eCLIP20.08■□□□□ 0.81
COL27A1-206ENST00000490831 GPR162Q16538 588 aa20.08■□□□□ 0.81
COL27A1-206ENST00000490831 A0A087WZG4 1122 aa20.07■□□□□ 0.8
COL27A1-206ENST00000490831 RIPK4P57078 832 aa20.07■□□□□ 0.8
COL27A1-206ENST00000490831 USPL1Q5W0Q7 1092 aa20.07■□□□□ 0.8
COL27A1-206ENST00000490831 ADAMTS8Q9UP79 889 aa20.07■□□□□ 0.8
COL27A1-206ENST00000490831 USP16Q9Y5T5 823 aa20.07■□□□□ 0.8
COL27A1-206ENST00000490831 PARP3Q9Y6F1 533 aa20.07■□□□□ 0.8
COL27A1-206ENST00000490831 A1BGP04217 495 aa20.06■□□□□ 0.8
COL27A1-206ENST00000490831 DDR1Q08345 913 aa20.06■□□□□ 0.8
COL27A1-206ENST00000490831 RUNDC1Q96C34 613 aa20.06■□□□□ 0.8
COL27A1-206ENST00000490831 THUMPD2Q9BTF0 503 aaKnown RBP20.06■□□□□ 0.8
COL27A1-206ENST00000490831 BCL2L12Q9HB09 334 aa20.06■□□□□ 0.8
COL27A1-206ENST00000490831 MIS18AQ9NYP9 233 aa20.06■□□□□ 0.8
COL27A1-206ENST00000490831 KIAA1551Q9HCM1 1747 aa20.05■□□□□ 0.8
COL27A1-206ENST00000490831 PRAMEF22A3QJZ6 481 aa20.05■□□□□ 0.8
COL27A1-206ENST00000490831 YBX3P16989 372 aaKnown RBP eCLIP20.05■□□□□ 0.8
COL27A1-206ENST00000490831 YY1P25490 414 aa20.05■□□□□ 0.8
COL27A1-206ENST00000490831 LMOD3Q0VAK6 560 aa20.05■□□□□ 0.8
COL27A1-206ENST00000490831 POLRMTO00411 1230 aaKnown RBP20.04■□□□□ 0.8
COL27A1-206ENST00000490831 TGFB2P61812 414 aa20.04■□□□□ 0.8
COL27A1-206ENST00000490831 CCDC146Q8IYE0 955 aa20.04■□□□□ 0.8
COL27A1-206ENST00000490831 BABAM1Q9NWV8 329 aa20.04■□□□□ 0.8
COL27A1-206ENST00000490831 PXDNLA1KZ92 1463 aa20.04■□□□□ 0.8
COL27A1-206ENST00000490831 GRIN3BO60391 1043 aa20.03■□□□□ 0.8
COL27A1-206ENST00000490831 EIF4A1P60842 406 aaKnown RBP20.03■□□□□ 0.8
COL27A1-206ENST00000490831 CHD4Q14839 1912 aa20.03■□□□□ 0.8
COL27A1-206ENST00000490831 SCN7AQ01118 1682 aa20.03■□□□□ 0.8
COL27A1-206ENST00000490831 NFIXQ14938 502 aa20.02■□□□□ 0.8
COL27A1-206ENST00000490831 NRXN2Q9P2S2 1712 aa20.02■□□□□ 0.79
COL27A1-206ENST00000490831 LAMB4A4D0S4 1761 aa20.01■□□□□ 0.79
COL27A1-206ENST00000490831 GIGYF1O75420 1035 aaPredicted RBP20.01■□□□□ 0.79
COL27A1-206ENST00000490831 PELP1Q8IZL8 1130 aaKnown RBP20.01■□□□□ 0.79
COL27A1-206ENST00000490831 TRIM35Q9UPQ4 493 aa20■□□□□ 0.79
COL27A1-206ENST00000490831 NBPF26B4DH59 902 aa19.99■□□□□ 0.79
COL27A1-206ENST00000490831 CAMTA2O94983 1202 aa19.99■□□□□ 0.79
COL27A1-206ENST00000490831 NBPF10Q6P3W6 841 aaKnown RBP19.99■□□□□ 0.79
COL27A1-206ENST00000490831 NBPF15Q8N660 670 aa19.99■□□□□ 0.79
COL27A1-206ENST00000490831 TBC1D2BQ9UPU7 963 aa19.99■□□□□ 0.79
COL27A1-206ENST00000490831 RRP7AQ9Y3A4 280 aaKnown RBP19.99■□□□□ 0.79
COL27A1-206ENST00000490831 BCORQ6W2J9 1755 aa19.98■□□□□ 0.79
COL27A1-206ENST00000490831 AFDNP55196 1824 aaKnown RBP19.97■□□□□ 0.79
COL27A1-206ENST00000490831 RGL2O15211 777 aa19.97■□□□□ 0.79
COL27A1-206ENST00000490831 PIP4K2AP48426 406 aaPredicted RBP19.97■□□□□ 0.79
COL27A1-206ENST00000490831 NPM2Q86SE8 214 aaKnown RBP19.97■□□□□ 0.79
COL27A1-206ENST00000490831 DZIP3Q86Y13 1208 aaKnown RBP19.97■□□□□ 0.79
COL27A1-206ENST00000490831 TSPYL4Q9UJ04 414 aa19.97■□□□□ 0.79
COL27A1-206ENST00000490831 ZNF330Q9Y3S2 320 aaPredicted RBP19.97■□□□□ 0.79
COL27A1-206ENST00000490831 N4BP2Q86UW6 1770 aaPredicted RBP19.97■□□□□ 0.79
COL27A1-206ENST00000490831 A0A0G2JLW4 131 aa19.96■□□□□ 0.79
COL27A1-206ENST00000490831 SERPINB2P05120 415 aa19.96■□□□□ 0.79
COL27A1-206ENST00000490831 DPEP1P16444 411 aa19.96■□□□□ 0.79
COL27A1-206ENST00000490831 KCNA3P22001 575 aa19.96■□□□□ 0.79
COL27A1-206ENST00000490831 NEUROD2Q15784 382 aa19.96■□□□□ 0.79
COL27A1-206ENST00000490831 CCDC184Q52MB2 194 aa19.96■□□□□ 0.79
COL27A1-206ENST00000490831 TBC1D9BQ66K14 1250 aa19.96■□□□□ 0.79
COL27A1-206ENST00000490831 BRCA1P38398 1863 aaKnown RBP19.96■□□□□ 0.79
COL27A1-206ENST00000490831 CHL1O00533 1208 aa19.95■□□□□ 0.78
COL27A1-206ENST00000490831 CLEC4GQ6UXB4 293 aa19.95■□□□□ 0.78
COL27A1-206ENST00000490831 ANP32CO43423 234 aa19.94■□□□□ 0.78
COL27A1-206ENST00000490831 ERBB4Q15303 1308 aa19.93■□□□□ 0.78
COL27A1-206ENST00000490831 CARMIL3Q8ND23 1372 aa19.93■□□□□ 0.78
COL27A1-206ENST00000490831 APAF1O14727 1248 aa19.92■□□□□ 0.78
COL27A1-206ENST00000490831 BICDL1Q6ZP65 573 aa19.91■□□□□ 0.78
COL27A1-206ENST00000490831 SETDB2Q96T68 719 aa19.9■□□□□ 0.78
COL27A1-206ENST00000490831 PIM2Q9P1W9 311 aa19.9■□□□□ 0.78
COL27A1-206ENST00000490831 WWC3Q9ULE0 1092 aa19.9■□□□□ 0.78
COL27A1-206ENST00000490831 ZNF652Q9Y2D9 606 aa19.9■□□□□ 0.78
COL27A1-206ENST00000490831 ZNF784Q8NCA9 323 aaPredicted RBP19.89■□□□□ 0.77
COL27A1-206ENST00000490831 CFAP44Q96MT7 982 aa19.89■□□□□ 0.77
COL27A1-206ENST00000490831 BCS1LQ9Y276 419 aa19.89■□□□□ 0.77
COL27A1-206ENST00000490831 ARFGEF1Q9Y6D6 1849 aa19.88■□□□□ 0.77
COL27A1-206ENST00000490831 ERVV-1B6SEH8 477 aa19.88■□□□□ 0.77
COL27A1-206ENST00000490831 ZNF853P0CG23 659 aa19.88■□□□□ 0.77
COL27A1-206ENST00000490831 CHRNA5P30532 468 aa19.88■□□□□ 0.77
COL27A1-206ENST00000490831 PDIA6Q15084 440 aa19.88■□□□□ 0.77
COL27A1-206ENST00000490831 PRR5LQ6MZQ0 368 aa19.88■□□□□ 0.77
COL27A1-206ENST00000490831 LRP10Q7Z4F1 713 aa19.88■□□□□ 0.77
COL27A1-206ENST00000490831 BRIP1Q9BX63 1249 aa19.87■□□□□ 0.77
COL27A1-206ENST00000490831 MRS2Q9HD23 443 aa19.87■□□□□ 0.77
COL27A1-206ENST00000490831 DLEC1Q9Y238 1755 aa19.87■□□□□ 0.77
COL27A1-206ENST00000490831 ANKRD31Q8N7Z5 1873 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms